RNA–Protein interactions for RNA: ENST00000321805.11

UBE2D3-201, Transcript of ubiquitin conjugating enzyme E2 D3, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene UBE2D3, Length 1,087 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D3-201ENST00000321805 HMOX1P09601 288 aa28.71■■■□□ 2.19
UBE2D3-201ENST00000321805 COL23A1Q86Y22 540 aaPredicted RBP28.71■■■□□ 2.19
UBE2D3-201ENST00000321805 DCAF8L1A6NGE4 600 aa28.7■■■□□ 2.18
UBE2D3-201ENST00000321805 FHDC1Q9C0D6 1143 aaPredicted RBP28.7■■■□□ 2.18
UBE2D3-201ENST00000321805 CNGB1Q14028 1251 aaPredicted RBP28.69■■■□□ 2.18
UBE2D3-201ENST00000321805 CFAP53Q96M91 514 aa28.69■■■□□ 2.18
UBE2D3-201ENST00000321805 ATP6V1AP38606 617 aa28.68■■■□□ 2.18
UBE2D3-201ENST00000321805 SYT17Q9BSW7 474 aa28.68■■■□□ 2.18
UBE2D3-201ENST00000321805 LINC00116Q8NCU8 138 aa28.67■■■□□ 2.18
UBE2D3-201ENST00000321805 MRC1P22897 1456 aa28.66■■■□□ 2.18
UBE2D3-201ENST00000321805 MSH5O43196 834 aa28.66■■■□□ 2.18
UBE2D3-201ENST00000321805 SSFA2P28290 1259 aa28.66■■■□□ 2.18
UBE2D3-201ENST00000321805 ADAMTS7Q9UKP4 1686 aa28.66■■■□□ 2.18
UBE2D3-201ENST00000321805 ITPK1Q13572 414 aa28.65■■■□□ 2.18
UBE2D3-201ENST00000321805 U2SURPO15042 1029 aaKnown RBP28.64■■■□□ 2.18
UBE2D3-201ENST00000321805 CICQ96RK0 1608 aaPredicted RBP28.64■■■□□ 2.18
UBE2D3-201ENST00000321805 VIRMAQ69YN4 1812 aaKnown RBP28.64■■■□□ 2.17
UBE2D3-201ENST00000321805 COL5A3P25940 1745 aaPredicted RBP28.63■■■□□ 2.17
UBE2D3-201ENST00000321805 PPP2R1AP30153 589 aa28.63■■■□□ 2.17
UBE2D3-201ENST00000321805 NFATC2IPQ8NCF5 419 aa28.63■■■□□ 2.17
UBE2D3-201ENST00000321805 MTHFSDQ2M296 383 aaKnown RBP28.62■■■□□ 2.17
UBE2D3-201ENST00000321805 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP28.61■■■□□ 2.17
UBE2D3-201ENST00000321805 RBM42Q9BTD8 480 aaKnown RBP28.61■■■□□ 2.17
UBE2D3-201ENST00000321805 SLC52A2Q9HAB3 445 aa28.61■■■□□ 2.17
UBE2D3-201ENST00000321805 NUDCQ9Y266 331 aa28.61■■■□□ 2.17
UBE2D3-201ENST00000321805 GAS2L2Q8NHY3 880 aa28.6■■■□□ 2.17
UBE2D3-201ENST00000321805 SLC4A9Q96Q91 983 aa28.6■■■□□ 2.17
UBE2D3-201ENST00000321805 GNPATO15228 680 aa28.59■■■□□ 2.17
UBE2D3-201ENST00000321805 RNMTO43148 476 aaKnown RBP28.59■■■□□ 2.17
UBE2D3-201ENST00000321805 RC3H1Q5TC82 1133 aaKnown RBP28.59■■■□□ 2.17
UBE2D3-201ENST00000321805 CNTNAP4Q9C0A0 1308 aa28.59■■■□□ 2.17
UBE2D3-201ENST00000321805 AMIGO3Q86WK7 504 aa28.58■■■□□ 2.17
UBE2D3-201ENST00000321805 PHF14O94880 888 aa28.57■■■□□ 2.16
UBE2D3-201ENST00000321805 LGR6Q9HBX8 967 aa28.56■■■□□ 2.16
UBE2D3-201ENST00000321805 ADRA2BP18089 450 aa28.55■■■□□ 2.16
UBE2D3-201ENST00000321805 RTCBQ9Y3I0 505 aaKnown RBP28.55■■■□□ 2.16
UBE2D3-201ENST00000321805 MSL1Q68DK7 614 aa28.54■■■□□ 2.16
UBE2D3-201ENST00000321805 TJP1Q07157 1748 aa28.53■■■□□ 2.16
UBE2D3-201ENST00000321805 PTCD1O75127 700 aaKnown RBP28.53■■■□□ 2.16
UBE2D3-201ENST00000321805 RSPH6AQ9H0K4 717 aa28.53■■■□□ 2.16
UBE2D3-201ENST00000321805 GNAT3A8MTJ3 354 aa28.51■■■□□ 2.15
UBE2D3-201ENST00000321805 MYH14Q7Z406 1995 aaKnown RBP28.5■■■□□ 2.15
UBE2D3-201ENST00000321805 RPS6KA4O75676 772 aa28.5■■■□□ 2.15
UBE2D3-201ENST00000321805 PRKAR2BP31323 418 aa28.5■■■□□ 2.15
UBE2D3-201ENST00000321805 KLHL34Q8N239 644 aa28.5■■■□□ 2.15
UBE2D3-201ENST00000321805 FCHSD2O94868 740 aa28.49■■■□□ 2.15
UBE2D3-201ENST00000321805 TRAPPC3LQ5T215 181 aa28.49■■■□□ 2.15
UBE2D3-201ENST00000321805 UBR2Q8IWV8 1755 aa28.48■■■□□ 2.15
UBE2D3-201ENST00000321805 U2AF1L5P0DN76 240 aaPredicted RBP28.48■■■□□ 2.15
UBE2D3-201ENST00000321805 U2AF1Q01081 240 aaKnown RBP eCLIP28.48■■■□□ 2.152e-12■□□□□ 11.1
UBE2D3-201ENST00000321805 KCPQ6ZWJ8 1503 aa28.48■■■□□ 2.15
UBE2D3-201ENST00000321805 SMIM5Q71RC9 77 aa28.47■■■□□ 2.15
UBE2D3-201ENST00000321805 CD2APQ9Y5K6 639 aa28.47■■■□□ 2.15
UBE2D3-201ENST00000321805 CRKLP46109 303 aaKnown RBP28.46■■■□□ 2.15
UBE2D3-201ENST00000321805 SIPA1L3O60292 1781 aaPredicted RBP28.46■■■□□ 2.15
UBE2D3-201ENST00000321805 CEMIPQ8WUJ3 1361 aa28.46■■■□□ 2.15
UBE2D3-201ENST00000321805 TEFQ10587 303 aa28.45■■■□□ 2.14
UBE2D3-201ENST00000321805 VSIG10Q8N0Z9 540 aa28.45■■■□□ 2.14
UBE2D3-201ENST00000321805 C4AP0C0L4 1744 aa28.44■■■□□ 2.14
UBE2D3-201ENST00000321805 PHACTR3Q96KR7 559 aa28.44■■■□□ 2.14
UBE2D3-201ENST00000321805 YY1P25490 414 aa28.43■■■□□ 2.14
UBE2D3-201ENST00000321805 SLC39A6Q13433 755 aa28.43■■■□□ 2.14
UBE2D3-201ENST00000321805 IL17REQ8NFR9 667 aa28.43■■■□□ 2.14
UBE2D3-201ENST00000321805 ARHGEF1Q92888 912 aaKnown RBP28.43■■■□□ 2.14
UBE2D3-201ENST00000321805 RFC4P35249 363 aa28.42■■■□□ 2.14
UBE2D3-201ENST00000321805 RALBP1Q15311 655 aa28.42■■■□□ 2.14
UBE2D3-201ENST00000321805 NLGN1Q8N2Q7 840 aa28.42■■■□□ 2.14
UBE2D3-201ENST00000321805 NLGN2Q8NFZ4 835 aa28.42■■■□□ 2.14
UBE2D3-201ENST00000321805 UTRNP46939 3433 aa28.41■■■□□ 2.14
UBE2D3-201ENST00000321805 TTC5Q8N0Z6 440 aa28.41■■■□□ 2.14
UBE2D3-201ENST00000321805 CHD4Q14839 1912 aa28.4■■■□□ 2.14
UBE2D3-201ENST00000321805 DNAJC10Q8IXB1 793 aa28.4■■■□□ 2.14
UBE2D3-201ENST00000321805 GPR162Q16538 588 aa28.39■■■□□ 2.14
UBE2D3-201ENST00000321805 CCDC87Q9NVE4 849 aa28.39■■■□□ 2.14
UBE2D3-201ENST00000321805 INTS5Q6P9B9 1019 aaKnown RBP28.38■■■□□ 2.13
UBE2D3-201ENST00000321805 CYP19A1P11511 503 aaPredicted RBP28.37■■■□□ 2.13
UBE2D3-201ENST00000321805 ZNF790Q6PG37 636 aa28.37■■■□□ 2.13
UBE2D3-201ENST00000321805 HTATSF1O43719 755 aaKnown RBP28.36■■■□□ 2.13
UBE2D3-201ENST00000321805 NEFMP07197 916 aa28.36■■■□□ 2.13
UBE2D3-201ENST00000321805 MMP10P09238 476 aa28.36■■■□□ 2.13
UBE2D3-201ENST00000321805 GYS1P13807 737 aa28.36■■■□□ 2.13
UBE2D3-201ENST00000321805 RTF1Q92541 710 aaKnown RBP28.36■■■□□ 2.13
UBE2D3-201ENST00000321805 DDX10Q13206 875 aaKnown RBP28.35■■■□□ 2.13
UBE2D3-201ENST00000321805 SOS1Q07889 1333 aaPredicted RBP28.35■■■□□ 2.13
UBE2D3-201ENST00000321805 USP42Q9H9J4 1324 aaKnown RBP28.35■■■□□ 2.13
UBE2D3-201ENST00000321805 KIF13BQ9NQT8 1826 aa28.34■■■□□ 2.13
UBE2D3-201ENST00000321805 GOLGB1Q14789 3259 aaKnown RBP28.34■■■□□ 2.13
UBE2D3-201ENST00000321805 HEG1Q9ULI3 1381 aa28.34■■■□□ 2.13
UBE2D3-201ENST00000321805 TEX13AQ9BXU3 409 aaPredicted RBP28.33■■■□□ 2.13
UBE2D3-201ENST00000321805 PNNQ9H307 717 aaKnown RBP28.33■■■□□ 2.13
UBE2D3-201ENST00000321805 STARD3NLO95772 234 aa28.32■■■□□ 2.12
UBE2D3-201ENST00000321805 GRIN3BO60391 1043 aa28.31■■■□□ 2.12
UBE2D3-201ENST00000321805 ZNF496Q96IT1 587 aaPredicted RBP28.31■■■□□ 2.12
UBE2D3-201ENST00000321805 FMNL2Q96PY5 1086 aa28.31■■■□□ 2.12
UBE2D3-201ENST00000321805 COL15A1P39059 1388 aa28.3■■■□□ 2.12
UBE2D3-201ENST00000321805 BTBD11A6QL63 1104 aa28.3■■■□□ 2.12
UBE2D3-201ENST00000321805 ZEB1P37275 1124 aaPredicted RBP28.3■■■□□ 2.12
UBE2D3-201ENST00000321805 PELP1Q8IZL8 1130 aaKnown RBP28.3■■■□□ 2.12
UBE2D3-201ENST00000321805 C10orf71Q711Q0 1435 aa28.29■■■□□ 2.12
UBE2D3-201ENST00000321805 ZBTB1Q9Y2K1 713 aa28.29■■■□□ 2.12
Retrieved 100 of 20,778 RNA–protein pairs in 17.1 ms