RNA–Protein interactions for RNA: ENST00000320280.8

SCAMP1-201, Transcript of secretory carrier membrane protein 1, humanhuman

TSL 3

Gene SCAMP1, Length 3,766 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP1-201ENST00000320280 PARD3Q8TEW0 1356 aa4.5□□□□□ -1.69
SCAMP1-201ENST00000320280 NCAPD2Q15021 1401 aa4.5□□□□□ -1.69
SCAMP1-201ENST00000320280 NUTM2DQ5VT03 806 aaPredicted RBP4.5□□□□□ -1.69
SCAMP1-201ENST00000320280 SRPK2P78362 688 aaKnown RBP4.5□□□□□ -1.69
SCAMP1-201ENST00000320280 KCNH5Q8NCM2 988 aa4.5□□□□□ -1.69
SCAMP1-201ENST00000320280 STK26Q9P289 416 aa4.5□□□□□ -1.69
SCAMP1-201ENST00000320280 MINK1Q8N4C8 1332 aaPredicted RBP4.49□□□□□ -1.69
SCAMP1-201ENST00000320280 TK2O00142 265 aa4.49□□□□□ -1.69
SCAMP1-201ENST00000320280 WAPLQ7Z5K2 1190 aa4.49□□□□□ -1.69
SCAMP1-201ENST00000320280 FBXO41Q8TF61 875 aa4.49□□□□□ -1.69
SCAMP1-201ENST00000320280 CDHR5Q9HBB8 845 aa4.49□□□□□ -1.69
SCAMP1-201ENST00000320280 NSD3Q9BZ95 1437 aa4.49□□□□□ -1.69
SCAMP1-201ENST00000320280 FAM161AQ3B820 660 aa4.49□□□□□ -1.69
SCAMP1-201ENST00000320280 PKD1L3Q7Z443 1732 aa4.49□□□□□ -1.69
SCAMP1-201ENST00000320280 SPATA31A3Q5VYP0 1347 aa4.49□□□□□ -1.69
SCAMP1-201ENST00000320280 PPP1R3GB7ZBB8 358 aa4.49□□□□□ -1.69
SCAMP1-201ENST00000320280 BRINP3Q76B58 766 aa4.49□□□□□ -1.69
SCAMP1-201ENST00000320280 C14orf37Q86TY3 774 aa4.49□□□□□ -1.69
SCAMP1-201ENST00000320280 LRRC59Q96AG4 307 aaKnown RBP4.49□□□□□ -1.69
SCAMP1-201ENST00000320280 HPS5Q9UPZ3 1129 aa4.49□□□□□ -1.69
SCAMP1-201ENST00000320280 ACEP12821 1306 aa4.48□□□□□ -1.69
SCAMP1-201ENST00000320280 TTC21BQ7Z4L5 1316 aa4.48□□□□□ -1.69
SCAMP1-201ENST00000320280 PNPLA6Q8IY17 1366 aa4.48□□□□□ -1.69
SCAMP1-201ENST00000320280 LRP6O75581 1613 aa4.48□□□□□ -1.69
SCAMP1-201ENST00000320280 RGPD3A6NKT7 1758 aaPredicted RBP4.48□□□□□ -1.69
SCAMP1-201ENST00000320280 RGPD4Q7Z3J3 1758 aa4.48□□□□□ -1.69
SCAMP1-201ENST00000320280 NLRP13Q86W25 1043 aa4.48□□□□□ -1.69
SCAMP1-201ENST00000320280 CICQ96RK0 1608 aaPredicted RBP4.47□□□□□ -1.69
SCAMP1-201ENST00000320280 PER1O15534 1290 aaPredicted RBP4.47□□□□□ -1.69
SCAMP1-201ENST00000320280 NGEFQ8N5V2 710 aa4.47□□□□□ -1.69
SCAMP1-201ENST00000320280 PNMA3Q9UL41 463 aa4.47□□□□□ -1.69
SCAMP1-201ENST00000320280 KNSTRNQ9Y448 316 aa4.47□□□□□ -1.69
SCAMP1-201ENST00000320280 ADAMTS7Q9UKP4 1686 aa4.47□□□□□ -1.69
SCAMP1-201ENST00000320280 NUTM2FA1L443 756 aa4.47□□□□□ -1.69
SCAMP1-201ENST00000320280 C11orf95C9JLR9 678 aaPredicted RBP4.47□□□□□ -1.69
SCAMP1-201ENST00000320280 MFSD10Q14728 455 aa4.47□□□□□ -1.69
SCAMP1-201ENST00000320280 LRCH3Q96II8 777 aa4.47□□□□□ -1.69
SCAMP1-201ENST00000320280 RABGEF1Q9UJ41 708 aa4.47□□□□□ -1.69
SCAMP1-201ENST00000320280 COL3A1P02461 1466 aaPredicted RBP4.47□□□□□ -1.69
SCAMP1-201ENST00000320280 PEAK1Q9H792 1746 aa4.47□□□□□ -1.69
SCAMP1-201ENST00000320280 ZNF831Q5JPB2 1677 aa4.47□□□□□ -1.69
SCAMP1-201ENST00000320280 CCER2I3L3R5 266 aa4.47□□□□□ -1.69
SCAMP1-201ENST00000320280 SAMD7Q7Z3H4 446 aa4.47□□□□□ -1.69
SCAMP1-201ENST00000320280 NGDNQ8NEJ9 315 aaKnown RBP4.47□□□□□ -1.69
SCAMP1-201ENST00000320280 CDKN2AIPQ9NXV6 580 aaPredicted RBP4.47□□□□□ -1.69
SCAMP1-201ENST00000320280 OVOS2A0A0G2JMS6 1433 aa4.46□□□□□ -1.69
SCAMP1-201ENST00000320280 COPS2P61201 443 aa4.46□□□□□ -1.7
SCAMP1-201ENST00000320280 KRT28Q7Z3Y7 464 aa4.46□□□□□ -1.7
SCAMP1-201ENST00000320280 ANO8Q9HCE9 1232 aaPredicted RBP4.46□□□□□ -1.7
SCAMP1-201ENST00000320280 TSKSQ9UJT2 592 aa4.46□□□□□ -1.7
SCAMP1-201ENST00000320280 SLIT2O94813 1529 aa4.46□□□□□ -1.7
SCAMP1-201ENST00000320280 PHF14O94880 888 aa4.46□□□□□ -1.7
SCAMP1-201ENST00000320280 FBXW7Q969H0 707 aa4.46□□□□□ -1.7
SCAMP1-201ENST00000320280 THSD7AQ9UPZ6 1657 aa4.46□□□□□ -1.7
SCAMP1-201ENST00000320280 FLT4P35916 1363 aa4.46□□□□□ -1.7
SCAMP1-201ENST00000320280 MYBBP1AQ9BQG0 1328 aaKnown RBP4.46□□□□□ -1.7
SCAMP1-201ENST00000320280 ESCO1Q5FWF5 840 aa4.45□□□□□ -1.7
SCAMP1-201ENST00000320280 CDCA7LQ96GN5 454 aa4.45□□□□□ -1.7
SCAMP1-201ENST00000320280 COG3Q96JB2 828 aa4.45□□□□□ -1.7
SCAMP1-201ENST00000320280 PNNQ9H307 717 aaKnown RBP4.45□□□□□ -1.7
SCAMP1-201ENST00000320280 CABP1Q9NZU7 370 aa4.45□□□□□ -1.7
SCAMP1-201ENST00000320280 UBAP1LF5GYI3 381 aa4.45□□□□□ -1.7
SCAMP1-201ENST00000320280 C3orf80F5H4A9 247 aa4.45□□□□□ -1.7
SCAMP1-201ENST00000320280 HMGB2P26583 209 aaKnown RBP4.45□□□□□ -1.7
SCAMP1-201ENST00000320280 MLLT3P42568 568 aaPredicted RBP4.45□□□□□ -1.7
SCAMP1-201ENST00000320280 PRIM1P49642 420 aaKnown RBP4.45□□□□□ -1.7
SCAMP1-201ENST00000320280 PPP4CP60510 307 aa4.45□□□□□ -1.7
SCAMP1-201ENST00000320280 NUDT18Q6ZVK8 323 aa4.45□□□□□ -1.7
SCAMP1-201ENST00000320280 RGPD5Q99666 1765 aa4.45□□□□□ -1.7
SCAMP1-201ENST00000320280 VIRMAQ69YN4 1812 aaKnown RBP4.45□□□□□ -1.7
SCAMP1-201ENST00000320280 BCL9O00512 1426 aa4.45□□□□□ -1.7
SCAMP1-201ENST00000320280 PANK3Q9H999 370 aa4.44□□□□□ -1.7
SCAMP1-201ENST00000320280 LRRC37A3O60309 1634 aa4.44□□□□□ -1.7
SCAMP1-201ENST00000320280 TRIM6-TRIM34B2RNG4 842 aa4.44□□□□□ -1.7
SCAMP1-201ENST00000320280 PACS2Q86VP3 889 aa4.44□□□□□ -1.7
SCAMP1-201ENST00000320280 NLRP7Q8WX94 980 aa4.44□□□□□ -1.7
SCAMP1-201ENST00000320280 CDCA7Q9BWT1 371 aaPredicted RBP4.44□□□□□ -1.7
SCAMP1-201ENST00000320280 THRAP3Q9Y2W1 955 aaKnown RBP4.44□□□□□ -1.7
SCAMP1-201ENST00000320280 Q6ZNB5 142 aa4.43□□□□□ -1.7
SCAMP1-201ENST00000320280 CFAP53Q96M91 514 aa4.43□□□□□ -1.7
SCAMP1-201ENST00000320280 SHANK3Q9BYB0 1731 aa4.43□□□□□ -1.7
SCAMP1-201ENST00000320280 BHMG1C9JSJ3 638 aaPredicted RBP4.43□□□□□ -1.7
SCAMP1-201ENST00000320280 FYB1O15117 783 aa4.43□□□□□ -1.7
SCAMP1-201ENST00000320280 EN1Q05925 392 aaPredicted RBP4.43□□□□□ -1.7
SCAMP1-201ENST00000320280 SLC12A5Q9H2X9 1139 aa4.43□□□□□ -1.7
SCAMP1-201ENST00000320280 COL5A2P05997 1499 aaPredicted RBP4.43□□□□□ -1.7
SCAMP1-201ENST00000320280 KDRP35968 1356 aa4.43□□□□□ -1.7
SCAMP1-201ENST00000320280 ANP32CO43423 234 aa4.43□□□□□ -1.7
SCAMP1-201ENST00000320280 HAP1P54257 671 aaPredicted RBP4.43□□□□□ -1.7
SCAMP1-201ENST00000320280 TMC1Q8TDI8 760 aa4.43□□□□□ -1.7
SCAMP1-201ENST00000320280 HIRIP3Q9BW71 556 aaPredicted RBP4.43□□□□□ -1.7
SCAMP1-201ENST00000320280 CARD14Q9BXL6 1004 aa4.43□□□□□ -1.7
SCAMP1-201ENST00000320280 ATRNO75882 1429 aa4.43□□□□□ -1.7
SCAMP1-201ENST00000320280 SIPA1L3O60292 1781 aaPredicted RBP4.43□□□□□ -1.7
SCAMP1-201ENST00000320280 FAM98CQ17RN3 349 aaKnown RBP4.42□□□□□ -1.7
SCAMP1-201ENST00000320280 ZNF516Q92618 1163 aa4.42□□□□□ -1.7
SCAMP1-201ENST00000320280 ORAI2Q96SN7 254 aa4.42□□□□□ -1.7
SCAMP1-201ENST00000320280 FAM198AQ9UFP1 575 aa4.42□□□□□ -1.7
SCAMP1-201ENST00000320280 SCN11AQ9UI33 1791 aa4.42□□□□□ -1.7
SCAMP1-201ENST00000320280 CRB1P82279 1406 aa4.42□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 12.1 ms