RNA–Protein interactions for RNA: ENST00000314121.8

ZNF541-202, Transcript of zinc finger protein 541, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene ZNF541, Length 4,631 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF541-202ENST00000314121 KDM4AO75164 1064 aa16.38■□□□□ 0.21
ZNF541-202ENST00000314121 ZMYND15Q9H091 742 aa16.38■□□□□ 0.21
ZNF541-202ENST00000314121 CEP126Q9P2H0 1117 aa16.38■□□□□ 0.21
ZNF541-202ENST00000314121 CTTNBP2Q8WZ74 1663 aa16.38■□□□□ 0.21
ZNF541-202ENST00000314121 DUOX2Q9NRD8 1548 aa16.38■□□□□ 0.21
ZNF541-202ENST00000314121 TRIM22Q8IYM9 498 aa16.38■□□□□ 0.21
ZNF541-202ENST00000314121 AK7Q96M32 723 aa16.38■□□□□ 0.21
ZNF541-202ENST00000314121 ZBTB40Q9NUA8 1239 aa16.38■□□□□ 0.21
ZNF541-202ENST00000314121 COL17A1Q9UMD9 1497 aaPredicted RBP16.37■□□□□ 0.21
ZNF541-202ENST00000314121 FAM83GA6ND36 823 aa16.37■□□□□ 0.21
ZNF541-202ENST00000314121 CBFA2T2O43439 604 aa16.37■□□□□ 0.21
ZNF541-202ENST00000314121 PIP4K2AP48426 406 aaPredicted RBP16.37■□□□□ 0.21
ZNF541-202ENST00000314121 TMX3Q96JJ7 454 aa16.37■□□□□ 0.21
ZNF541-202ENST00000314121 CWC15Q9P013 229 aaKnown RBP16.37■□□□□ 0.21
ZNF541-202ENST00000314121 DNAAF4Q8WXU2 420 aa16.37■□□□□ 0.21
ZNF541-202ENST00000314121 NPC1L1Q9UHC9 1359 aa16.37■□□□□ 0.21
ZNF541-202ENST00000314121 STX6O43752 255 aa16.37■□□□□ 0.21
ZNF541-202ENST00000314121 NOM1Q5C9Z4 860 aaKnown RBP16.37■□□□□ 0.21
ZNF541-202ENST00000314121 DACH1Q9UI36 760 aa16.37■□□□□ 0.21
ZNF541-202ENST00000314121 KIF2AO00139 706 aaPredicted RBP16.36■□□□□ 0.21
ZNF541-202ENST00000314121 UVSSAQ2YD98 709 aa16.36■□□□□ 0.21
ZNF541-202ENST00000314121 LRSAM1Q6UWE0 723 aa16.36■□□□□ 0.21
ZNF541-202ENST00000314121 SPG7Q9UQ90 795 aa16.36■□□□□ 0.21
ZNF541-202ENST00000314121 RBM27Q9P2N5 1060 aaKnown RBP16.36■□□□□ 0.21
ZNF541-202ENST00000314121 KDM5BQ9UGL1 1544 aa16.36■□□□□ 0.21
ZNF541-202ENST00000314121 RAB3GAP1Q15042 981 aa16.36■□□□□ 0.21
ZNF541-202ENST00000314121 BOLA2Q9H3K6 86 aa16.36■□□□□ 0.21
ZNF541-202ENST00000314121 TTC21BQ7Z4L5 1316 aa16.35■□□□□ 0.21
ZNF541-202ENST00000314121 CDKL5O76039 1030 aa16.35■□□□□ 0.21
ZNF541-202ENST00000314121 RRP12Q5JTH9 1297 aaKnown RBP16.35■□□□□ 0.21
ZNF541-202ENST00000314121 FANCAO15360 1455 aa16.35■□□□□ 0.21
ZNF541-202ENST00000314121 SMTNL1A8MU46 457 aa16.35■□□□□ 0.21
ZNF541-202ENST00000314121 CABP4P57796 275 aa16.35■□□□□ 0.21
ZNF541-202ENST00000314121 FKBP4Q02790 459 aaKnown RBP eCLIP16.35■□□□□ 0.21
ZNF541-202ENST00000314121 CCDC57Q2TAC2 916 aa16.35■□□□□ 0.21
ZNF541-202ENST00000314121 MRPL50Q8N5N7 158 aaKnown RBP16.35■□□□□ 0.21
ZNF541-202ENST00000314121 RBM42Q9BTD8 480 aaKnown RBP16.35■□□□□ 0.21
ZNF541-202ENST00000314121 ECHDC1Q9NTX5 307 aa16.35■□□□□ 0.21
ZNF541-202ENST00000314121 UBE2HP62256 183 aa16.35■□□□□ 0.21
ZNF541-202ENST00000314121 TTLL5Q6EMB2 1281 aa16.35■□□□□ 0.21
ZNF541-202ENST00000314121 LARP1Q6PKG0 1096 aaKnown RBP16.35■□□□□ 0.21
ZNF541-202ENST00000314121 MEIS3Q99687 375 aa16.35■□□□□ 0.21
ZNF541-202ENST00000314121 CNNM1Q9NRU3 951 aa16.35■□□□□ 0.21
ZNF541-202ENST00000314121 EIF2AK4Q9P2K8 1649 aaKnown RBP16.35■□□□□ 0.21
ZNF541-202ENST00000314121 KIF6Q6ZMV9 814 aa16.34■□□□□ 0.21
ZNF541-202ENST00000314121 DDX19AQ9NUU7 478 aaKnown RBP16.34■□□□□ 0.21
ZNF541-202ENST00000314121 PLCH2O75038 1416 aa16.34■□□□□ 0.21
ZNF541-202ENST00000314121 SHANK2Q9UPX8 1470 aa16.34■□□□□ 0.21
ZNF541-202ENST00000314121 NAP1L1P55209 391 aaKnown RBP16.34■□□□□ 0.21
ZNF541-202ENST00000314121 ZSCAN25Q6NSZ9 544 aa16.34■□□□□ 0.21
ZNF541-202ENST00000314121 U3KPZ7 1027 aaPredicted RBP16.34■□□□□ 0.21
ZNF541-202ENST00000314121 WDR62O43379 1518 aa16.34■□□□□ 0.21
ZNF541-202ENST00000314121 TXLNAP40222 546 aa16.34■□□□□ 0.21
ZNF541-202ENST00000314121 PDE1AP54750 535 aa16.34■□□□□ 0.21
ZNF541-202ENST00000314121 ANAPC15P60006 121 aa16.34■□□□□ 0.21
ZNF541-202ENST00000314121 PPFIBP1Q86W92 1011 aa16.34■□□□□ 0.21
ZNF541-202ENST00000314121 DDX54Q8TDD1 881 aaKnown RBP16.34■□□□□ 0.21
ZNF541-202ENST00000314121 ANO10Q9NW15 660 aa16.34■□□□□ 0.21
ZNF541-202ENST00000314121 BRPF1P55201 1214 aaPredicted RBP16.34■□□□□ 0.21
ZNF541-202ENST00000314121 PDE4CQ08493 712 aa16.34■□□□□ 0.21
ZNF541-202ENST00000314121 PTPN14Q15678 1187 aa16.34■□□□□ 0.21
ZNF541-202ENST00000314121 KCNH5Q8NCM2 988 aa16.34■□□□□ 0.21
ZNF541-202ENST00000314121 ADCY5O95622 1261 aa16.33■□□□□ 0.2
ZNF541-202ENST00000314121 NACAP1Q9BZK3 213 aa16.33■□□□□ 0.2
ZNF541-202ENST00000314121 DBF4Q9UBU7 674 aaPredicted RBP16.33■□□□□ 0.2
ZNF541-202ENST00000314121 FBXO31Q5XUX0 539 aaPredicted RBP16.33■□□□□ 0.2
ZNF541-202ENST00000314121 CAGE1Q8TC20 777 aa16.33■□□□□ 0.2
ZNF541-202ENST00000314121 DCTPP1Q9H773 170 aa16.33■□□□□ 0.2
ZNF541-202ENST00000314121 SPATA31E1Q6ZUB1 1445 aa16.32■□□□□ 0.2
ZNF541-202ENST00000314121 CTAGE5O15320 804 aa16.32■□□□□ 0.2
ZNF541-202ENST00000314121 VAMP4O75379 141 aa16.32■□□□□ 0.2
ZNF541-202ENST00000314121 SFPQP23246 707 aaKnown RBP eCLIP16.32■□□□□ 0.2
ZNF541-202ENST00000314121 PROSER2Q86WR7 435 aaPredicted RBP16.32■□□□□ 0.2
ZNF541-202ENST00000314121 DYNC1I1O14576 645 aa16.32■□□□□ 0.2
ZNF541-202ENST00000314121 FBLN1P23142 703 aa16.32■□□□□ 0.2
ZNF541-202ENST00000314121 TSHZ3Q63HK5 1081 aa16.32■□□□□ 0.2
ZNF541-202ENST00000314121 C8orf58Q8NAV2 365 aa16.32■□□□□ 0.2
ZNF541-202ENST00000314121 UBXN4Q92575 508 aa16.32■□□□□ 0.2
ZNF541-202ENST00000314121 EVI5LQ96CN4 794 aa16.32■□□□□ 0.2
ZNF541-202ENST00000314121 PPP1R42Q7Z4L9 355 aa16.31■□□□□ 0.2
ZNF541-202ENST00000314121 HMGB1P09429 215 aaKnown RBP16.31■□□□□ 0.2
ZNF541-202ENST00000314121 CKAP2LQ8IYA6 745 aa16.31■□□□□ 0.2
ZNF541-202ENST00000314121 GJB2P29033 226 aa16.31■□□□□ 0.2
ZNF541-202ENST00000314121 FAM177A1Q8N128 213 aaPredicted RBP16.31■□□□□ 0.2
ZNF541-202ENST00000314121 KIF18AQ8NI77 898 aa16.31■□□□□ 0.2
ZNF541-202ENST00000314121 SYCP2Q9BX26 1530 aa16.31■□□□□ 0.2
ZNF541-202ENST00000314121 CCDC8Q9H0W5 538 aaPredicted RBP16.31■□□□□ 0.2
ZNF541-202ENST00000314121 OFD1O75665 1012 aa16.31■□□□□ 0.2
ZNF541-202ENST00000314121 IMMTQ16891 758 aaKnown RBP16.31■□□□□ 0.2
ZNF541-202ENST00000314121 LARP6Q9BRS8 491 aaKnown RBP16.31■□□□□ 0.2
ZNF541-202ENST00000314121 HCLS1P14317 486 aaPredicted RBP16.3■□□□□ 0.2
ZNF541-202ENST00000314121 AMOTQ4VCS5 1084 aa16.3■□□□□ 0.2
ZNF541-202ENST00000314121 DNMT1P26358 1616 aaKnown RBP16.3■□□□□ 0.2
ZNF541-202ENST00000314121 ZMYM4Q5VZL5 1548 aa16.3■□□□□ 0.2
ZNF541-202ENST00000314121 CDR1P51861 262 aa16.3■□□□□ 0.2
ZNF541-202ENST00000314121 ESYT1Q9BSJ8 1104 aa16.3■□□□□ 0.2
ZNF541-202ENST00000314121 CCDC69A6NI79 296 aa16.3■□□□□ 0.2
ZNF541-202ENST00000314121 PRIMPOLQ96LW4 560 aa16.3■□□□□ 0.2
ZNF541-202ENST00000314121 CFAP100Q494V2 611 aa16.3■□□□□ 0.2
ZNF541-202ENST00000314121 CLIP2Q9UDT6 1046 aa16.3■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 18.6 ms