RNA–Protein interactions for RNA: ENST00000312989.11

PPP1CA-201, Transcript of protein phosphatase 1 catalytic subunit alpha, humanhuman

TSL 1 (best) BASIC

Gene PPP1CA, Length 1,389 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP1CA-201ENST00000312989 ZNF831Q5JPB2 1677 aa19.7■□□□□ 0.74
PPP1CA-201ENST00000312989 C1orf141Q5JVX7 400 aa19.7■□□□□ 0.74
PPP1CA-201ENST00000312989 SMIM5Q71RC9 77 aa19.69■□□□□ 0.74
PPP1CA-201ENST00000312989 RSPH6AQ9H0K4 717 aa19.69■□□□□ 0.74
PPP1CA-201ENST00000312989 SCN11AQ9UI33 1791 aa19.68■□□□□ 0.74
PPP1CA-201ENST00000312989 NFATC2IPQ8NCF5 419 aa19.68■□□□□ 0.74
PPP1CA-201ENST00000312989 U2SURPO15042 1029 aaKnown RBP19.67■□□□□ 0.74
PPP1CA-201ENST00000312989 RNMTO43148 476 aaKnown RBP19.67■□□□□ 0.74
PPP1CA-201ENST00000312989 CABP4P57796 275 aa19.67■□□□□ 0.74
PPP1CA-201ENST00000312989 CICQ96RK0 1608 aaPredicted RBP19.67■□□□□ 0.74
PPP1CA-201ENST00000312989 MAP3K5Q99683 1374 aa19.66■□□□□ 0.74
PPP1CA-201ENST00000312989 ATP6V1AP38606 617 aa19.66■□□□□ 0.74
PPP1CA-201ENST00000312989 PHACTR3Q96KR7 559 aa19.66■□□□□ 0.74
PPP1CA-201ENST00000312989 FHDC1Q9C0D6 1143 aaPredicted RBP19.66■□□□□ 0.74
PPP1CA-201ENST00000312989 SLC52A2Q9HAB3 445 aa19.66■□□□□ 0.74
PPP1CA-201ENST00000312989 PPP1R1BQ9UD71 204 aaPredicted RBP19.66■□□□□ 0.74
PPP1CA-201ENST00000312989 UBR3Q6ZT12 1888 aa19.65■□□□□ 0.74
PPP1CA-201ENST00000312989 COL5A3P25940 1745 aaPredicted RBP19.64■□□□□ 0.74
PPP1CA-201ENST00000312989 UTRNP46939 3433 aa19.64■□□□□ 0.73
PPP1CA-201ENST00000312989 ARXQ96QS3 562 aa19.64■□□□□ 0.73
PPP1CA-201ENST00000312989 KCPQ6ZWJ8 1503 aa19.64■□□□□ 0.73
PPP1CA-201ENST00000312989 AK7Q96M32 723 aa19.63■□□□□ 0.73
PPP1CA-201ENST00000312989 CFAP53Q96M91 514 aa19.63■□□□□ 0.73
PPP1CA-201ENST00000312989 SYT17Q9BSW7 474 aa19.63■□□□□ 0.73
PPP1CA-201ENST00000312989 TJP1Q07157 1748 aa19.62■□□□□ 0.73
PPP1CA-201ENST00000312989 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP19.62■□□□□ 0.73
PPP1CA-201ENST00000312989 PRKAR2BP31323 418 aa19.62■□□□□ 0.73
PPP1CA-201ENST00000312989 IL17REQ8NFR9 667 aa19.62■□□□□ 0.73
PPP1CA-201ENST00000312989 CEMIPQ8WUJ3 1361 aa19.61■□□□□ 0.73
PPP1CA-201ENST00000312989 CNTNAP4Q9C0A0 1308 aa19.61■□□□□ 0.73
PPP1CA-201ENST00000312989 SSFA2P28290 1259 aa19.61■□□□□ 0.73
PPP1CA-201ENST00000312989 FLAD1Q8NFF5 587 aa19.6■□□□□ 0.73
PPP1CA-201ENST00000312989 GAS2L2Q8NHY3 880 aa19.6■□□□□ 0.73
PPP1CA-201ENST00000312989 RBM42Q9BTD8 480 aaKnown RBP19.6■□□□□ 0.73
PPP1CA-201ENST00000312989 HMGB2P26583 209 aaKnown RBP19.59■□□□□ 0.73
PPP1CA-201ENST00000312989 DDX10Q13206 875 aaKnown RBP19.59■□□□□ 0.73
PPP1CA-201ENST00000312989 MSL1Q68DK7 614 aa19.59■□□□□ 0.73
PPP1CA-201ENST00000312989 GNPATO15228 680 aa19.58■□□□□ 0.73
PPP1CA-201ENST00000312989 PTCD1O75127 700 aaKnown RBP19.58■□□□□ 0.73
PPP1CA-201ENST00000312989 PHF14O94880 888 aa19.58■□□□□ 0.73
PPP1CA-201ENST00000312989 SLC39A6Q13433 755 aa19.58■□□□□ 0.73
PPP1CA-201ENST00000312989 RC3H1Q5TC82 1133 aaKnown RBP19.58■□□□□ 0.73
PPP1CA-201ENST00000312989 FCHSD2O94868 740 aa19.57■□□□□ 0.72
PPP1CA-201ENST00000312989 U2AF1L5P0DN76 240 aaPredicted RBP19.57■□□□□ 0.72
PPP1CA-201ENST00000312989 U2AF1Q01081 240 aaKnown RBP eCLIP19.57■□□□□ 0.72
PPP1CA-201ENST00000312989 NUDCQ9Y266 331 aa19.57■□□□□ 0.72
PPP1CA-201ENST00000312989 GOLGB1Q14789 3259 aaKnown RBP19.57■□□□□ 0.72
PPP1CA-201ENST00000312989 GNAT3A8MTJ3 354 aa19.57■□□□□ 0.72
PPP1CA-201ENST00000312989 MSH5O43196 834 aa19.56■□□□□ 0.72
PPP1CA-201ENST00000312989 POLD1P28340 1107 aa19.56■□□□□ 0.72
PPP1CA-201ENST00000312989 PLEKHF1Q96S99 279 aa19.56■□□□□ 0.72
PPP1CA-201ENST00000312989 SIPA1L3O60292 1781 aaPredicted RBP19.56■□□□□ 0.72
PPP1CA-201ENST00000312989 UBR2Q8IWV8 1755 aa19.56■□□□□ 0.72
PPP1CA-201ENST00000312989 MYH14Q7Z406 1995 aaKnown RBP19.55■□□□□ 0.72
PPP1CA-201ENST00000312989 RPS6KA4O75676 772 aa19.55■□□□□ 0.72
PPP1CA-201ENST00000312989 INTS5Q6P9B9 1019 aaKnown RBP19.55■□□□□ 0.72
PPP1CA-201ENST00000312989 VIRMAQ69YN4 1812 aaKnown RBP19.54■□□□□ 0.72
PPP1CA-201ENST00000312989 CRKLP46109 303 aaKnown RBP19.54■□□□□ 0.72
PPP1CA-201ENST00000312989 RALBP1Q15311 655 aa19.54■□□□□ 0.72
PPP1CA-201ENST00000312989 DNAJC10Q8IXB1 793 aa19.54■□□□□ 0.72
PPP1CA-201ENST00000312989 NLGN2Q8NFZ4 835 aa19.54■□□□□ 0.72
PPP1CA-201ENST00000312989 ARHGEF1Q92888 912 aaKnown RBP19.53■□□□□ 0.72
PPP1CA-201ENST00000312989 RTCBQ9Y3I0 505 aaKnown RBP19.52■□□□□ 0.72
PPP1CA-201ENST00000312989 C4AP0C0L4 1744 aa19.51■□□□□ 0.71
PPP1CA-201ENST00000312989 CYP19A1P11511 503 aaPredicted RBP19.51■□□□□ 0.71
PPP1CA-201ENST00000312989 ADRA2BP18089 450 aa19.51■□□□□ 0.71
PPP1CA-201ENST00000312989 VSIG10Q8N0Z9 540 aa19.5■□□□□ 0.71
PPP1CA-201ENST00000312989 KCNQ3O43525 872 aa19.49■□□□□ 0.71
PPP1CA-201ENST00000312989 GYS1P13807 737 aa19.49■□□□□ 0.71
PPP1CA-201ENST00000312989 TRAPPC3LQ5T215 181 aa19.49■□□□□ 0.71
PPP1CA-201ENST00000312989 ZNF790Q6PG37 636 aa19.49■□□□□ 0.71
PPP1CA-201ENST00000312989 ZNF496Q96IT1 587 aaPredicted RBP19.49■□□□□ 0.71
PPP1CA-201ENST00000312989 SOS1Q07889 1333 aaPredicted RBP19.49■□□□□ 0.71
PPP1CA-201ENST00000312989 MYBBP1AQ9BQG0 1328 aaKnown RBP19.49■□□□□ 0.71
PPP1CA-201ENST00000312989 MCM10Q7L590 875 aa19.48■□□□□ 0.71
PPP1CA-201ENST00000312989 HEG1Q9ULI3 1381 aa19.48■□□□□ 0.71
PPP1CA-201ENST00000312989 TEFQ10587 303 aa19.47■□□□□ 0.71
PPP1CA-201ENST00000312989 DCTN1Q14203 1278 aa19.47■□□□□ 0.71
PPP1CA-201ENST00000312989 ZBTB1Q9Y2K1 713 aa19.47■□□□□ 0.71
PPP1CA-201ENST00000312989 USP42Q9H9J4 1324 aaKnown RBP19.47■□□□□ 0.71
PPP1CA-201ENST00000312989 CCDC87Q9NVE4 849 aa19.46■□□□□ 0.71
PPP1CA-201ENST00000312989 HTATSF1O43719 755 aaKnown RBP19.45■□□□□ 0.7
PPP1CA-201ENST00000312989 ZEB1P37275 1124 aaPredicted RBP19.45■□□□□ 0.7
PPP1CA-201ENST00000312989 SRP68Q9UHB9 627 aaKnown RBP19.45■□□□□ 0.7
PPP1CA-201ENST00000312989 CD2APQ9Y5K6 639 aa19.45■□□□□ 0.7
PPP1CA-201ENST00000312989 MMP10P09238 476 aa19.44■□□□□ 0.7
PPP1CA-201ENST00000312989 PRKRIP1Q9H875 184 aaPredicted RBP19.44■□□□□ 0.7
PPP1CA-201ENST00000312989 KLHL34Q8N239 644 aa19.44■□□□□ 0.7
PPP1CA-201ENST00000312989 C10orf71Q711Q0 1435 aa19.43■□□□□ 0.7
PPP1CA-201ENST00000312989 RFC4P35249 363 aa19.43■□□□□ 0.7
PPP1CA-201ENST00000312989 NLGN1Q8N2Q7 840 aa19.43■□□□□ 0.7
PPP1CA-201ENST00000312989 KIAA1551Q9HCM1 1747 aa19.42■□□□□ 0.7
PPP1CA-201ENST00000312989 BTBD11A6QL63 1104 aa19.42■□□□□ 0.7
PPP1CA-201ENST00000312989 YBX3P16989 372 aaKnown RBP eCLIP19.42■□□□□ 0.76e-9■■■□□ 17.4
PPP1CA-201ENST00000312989 FKBP8Q14318 412 aa19.42■□□□□ 0.7
PPP1CA-201ENST00000312989 NFE2L2Q16236 605 aa19.42■□□□□ 0.7
PPP1CA-201ENST00000312989 TTC5Q8N0Z6 440 aa19.42■□□□□ 0.7
PPP1CA-201ENST00000312989 BCL2L12Q9HB09 334 aa19.42■□□□□ 0.7
PPP1CA-201ENST00000312989 COL15A1P39059 1388 aa19.42■□□□□ 0.7
PPP1CA-201ENST00000312989 PRAMEF22A3QJZ6 481 aa19.41■□□□□ 0.7
Retrieved 100 of 20,778 RNA–protein pairs in 72.7 ms