RNA–Protein interactions for RNA: ENST00000312849.4

LSMEM1-201, Transcript of leucine rich single-pass membrane protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LSMEM1, Length 1,870 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSMEM1-201ENST00000312849 FOXO3O43524 673 aa11.85□□□□□ -0.51
LSMEM1-201ENST00000312849 ATP8B2P98198 1209 aa11.85□□□□□ -0.51
LSMEM1-201ENST00000312849 G2E3Q7L622 706 aa11.85□□□□□ -0.51
LSMEM1-201ENST00000312849 OTUD7AQ8TE49 926 aaPredicted RBP11.85□□□□□ -0.51
LSMEM1-201ENST00000312849 AOX1Q06278 1338 aa11.84□□□□□ -0.51
LSMEM1-201ENST00000312849 NWD1Q149M9 1564 aa11.84□□□□□ -0.51
LSMEM1-201ENST00000312849 SOX12O15370 315 aa11.84□□□□□ -0.51
LSMEM1-201ENST00000312849 BAG4O95429 457 aaKnown RBP11.84□□□□□ -0.51
LSMEM1-201ENST00000312849 SSFA2P28290 1259 aa11.84□□□□□ -0.51
LSMEM1-201ENST00000312849 MCM2P49736 904 aa11.84□□□□□ -0.51
LSMEM1-201ENST00000312849 NLRP6P59044 892 aa11.84□□□□□ -0.51
LSMEM1-201ENST00000312849 FLIIQ13045 1269 aa11.84□□□□□ -0.51
LSMEM1-201ENST00000312849 KLHL40Q2TBA0 621 aa11.84□□□□□ -0.51
LSMEM1-201ENST00000312849 MIS18AQ9NYP9 233 aa11.84□□□□□ -0.51
LSMEM1-201ENST00000312849 AK9Q5TCS8 1911 aa11.84□□□□□ -0.51
LSMEM1-201ENST00000312849 EPB41L2O43491 1005 aaKnown RBP11.83□□□□□ -0.52
LSMEM1-201ENST00000312849 MCCP23508 829 aa11.83□□□□□ -0.52
LSMEM1-201ENST00000312849 HOXC9P31274 260 aa11.83□□□□□ -0.52
LSMEM1-201ENST00000312849 TAF7Q15545 349 aaPredicted RBP11.83□□□□□ -0.52
LSMEM1-201ENST00000312849 LRRCC1Q9C099 1032 aa11.83□□□□□ -0.52
LSMEM1-201ENST00000312849 FOXD4L1Q9NU39 408 aa11.83□□□□□ -0.52
LSMEM1-201ENST00000312849 F6X3S4 739 aa11.83□□□□□ -0.52
LSMEM1-201ENST00000312849 CYP2E1P05181 493 aaPredicted RBP11.83□□□□□ -0.52
LSMEM1-201ENST00000312849 STAP2Q9UGK3 403 aa11.83□□□□□ -0.52
LSMEM1-201ENST00000312849 SALL3Q9BXA9 1300 aa11.82□□□□□ -0.52
LSMEM1-201ENST00000312849 APBB1O00213 710 aa11.82□□□□□ -0.52
LSMEM1-201ENST00000312849 FKBP5Q13451 457 aaPredicted RBP11.82□□□□□ -0.52
LSMEM1-201ENST00000312849 LTN1O94822 1766 aa11.82□□□□□ -0.52
LSMEM1-201ENST00000312849 ANAPC15P60006 121 aa11.81□□□□□ -0.52
LSMEM1-201ENST00000312849 PANK2Q9BZ23 570 aa11.81□□□□□ -0.52
LSMEM1-201ENST00000312849 RAB11FIP3O75154 756 aa11.8□□□□□ -0.52
LSMEM1-201ENST00000312849 HOXB7P09629 217 aa11.8□□□□□ -0.52
LSMEM1-201ENST00000312849 MX1P20591 662 aa11.8□□□□□ -0.52
LSMEM1-201ENST00000312849 CEBPAP49715 358 aaPredicted RBP11.8□□□□□ -0.52
LSMEM1-201ENST00000312849 IL17RAQ96F46 866 aa11.8□□□□□ -0.52
LSMEM1-201ENST00000312849 RRAGDQ9NQL2 400 aaPredicted RBP11.8□□□□□ -0.52
LSMEM1-201ENST00000312849 CLCN1P35523 988 aa11.8□□□□□ -0.52
LSMEM1-201ENST00000312849 ARXQ96QS3 562 aa11.8□□□□□ -0.52
LSMEM1-201ENST00000312849 ESYT1Q9BSJ8 1104 aa11.8□□□□□ -0.52
LSMEM1-201ENST00000312849 DDX49Q9Y6V7 483 aaKnown RBP11.8□□□□□ -0.52
LSMEM1-201ENST00000312849 IL17REQ8NFR9 667 aa11.79□□□□□ -0.52
LSMEM1-201ENST00000312849 ANO8Q9HCE9 1232 aaPredicted RBP11.79□□□□□ -0.52
LSMEM1-201ENST00000312849 PHRF1Q9P1Y6 1649 aaKnown RBP11.79□□□□□ -0.52
LSMEM1-201ENST00000312849 EXOC6BQ9Y2D4 811 aa11.79□□□□□ -0.52
LSMEM1-201ENST00000312849 CHD2O14647 1828 aaKnown RBP11.79□□□□□ -0.52
LSMEM1-201ENST00000312849 KDM3BQ7LBC6 1761 aa11.79□□□□□ -0.52
LSMEM1-201ENST00000312849 UBTFL1P0CB47 393 aaPredicted RBP11.78□□□□□ -0.52
LSMEM1-201ENST00000312849 ZNF445P59923 1031 aa11.78□□□□□ -0.52
LSMEM1-201ENST00000312849 ABTB2Q8N961 1025 aa11.78□□□□□ -0.52
LSMEM1-201ENST00000312849 LMO7Q8WWI1 1683 aa11.78□□□□□ -0.52
LSMEM1-201ENST00000312849 MED1Q15648 1581 aaPredicted RBP11.78□□□□□ -0.52
LSMEM1-201ENST00000312849 ADGRL3Q9HAR2 1447 aa11.78□□□□□ -0.52
LSMEM1-201ENST00000312849 GAS2L3Q86XJ1 694 aa11.78□□□□□ -0.52
LSMEM1-201ENST00000312849 SSH3Q8TE77 659 aa11.78□□□□□ -0.52
LSMEM1-201ENST00000312849 ANP32BQ92688 251 aaKnown RBP11.78□□□□□ -0.52
LSMEM1-201ENST00000312849 CEMIPQ8WUJ3 1361 aa11.77□□□□□ -0.52
LSMEM1-201ENST00000312849 CHMLP26374 656 aa11.77□□□□□ -0.53
LSMEM1-201ENST00000312849 CCDC173Q0VFZ6 552 aa11.77□□□□□ -0.53
LSMEM1-201ENST00000312849 HDGFL1Q5TGJ6 251 aa11.77□□□□□ -0.53
LSMEM1-201ENST00000312849 MCTP1Q6DN14 999 aa11.77□□□□□ -0.53
LSMEM1-201ENST00000312849 IP6K1Q92551 441 aa11.77□□□□□ -0.53
LSMEM1-201ENST00000312849 TRIM44Q96DX7 344 aaPredicted RBP11.77□□□□□ -0.53
LSMEM1-201ENST00000312849 USP44Q9H0E7 712 aa11.77□□□□□ -0.53
LSMEM1-201ENST00000312849 LMBRD1Q9NUN5 540 aa11.77□□□□□ -0.53
LSMEM1-201ENST00000312849 LRRFIP2Q9Y608 721 aaKnown RBP11.77□□□□□ -0.53
LSMEM1-201ENST00000312849 PNMA6EA0A0J9YXQ4 647 aa11.76□□□□□ -0.53
LSMEM1-201ENST00000312849 CUL4AQ13619 759 aa11.76□□□□□ -0.53
LSMEM1-201ENST00000312849 INTS4Q96HW7 963 aaKnown RBP11.76□□□□□ -0.53
LSMEM1-201ENST00000312849 KCNA6P17658 529 aa11.76□□□□□ -0.53
LSMEM1-201ENST00000312849 NEK4P51957 841 aa11.76□□□□□ -0.53
LSMEM1-201ENST00000312849 POLA2Q14181 598 aa11.76□□□□□ -0.53
LSMEM1-201ENST00000312849 HSP90AB4PQ58FF6 505 aa11.76□□□□□ -0.53
LSMEM1-201ENST00000312849 PPP1R9BQ96SB3 815 aa11.76□□□□□ -0.53
LSMEM1-201ENST00000312849 NFAT5O94916 1531 aa11.75□□□□□ -0.53
LSMEM1-201ENST00000312849 ESPNB1AK53 854 aa11.75□□□□□ -0.53
LSMEM1-201ENST00000312849 TRIM6-TRIM34B2RNG4 842 aa11.75□□□□□ -0.53
LSMEM1-201ENST00000312849 PHF8Q9UPP1 1060 aa11.75□□□□□ -0.53
LSMEM1-201ENST00000312849 HDAC5Q9UQL6 1122 aa11.75□□□□□ -0.53
LSMEM1-201ENST00000312849 NASPP49321 788 aaPredicted RBP11.74□□□□□ -0.53
LSMEM1-201ENST00000312849 KCNH5Q8NCM2 988 aa11.74□□□□□ -0.53
LSMEM1-201ENST00000312849 RILPL2Q969X0 211 aa11.74□□□□□ -0.53
LSMEM1-201ENST00000312849 TMX3Q96JJ7 454 aa11.74□□□□□ -0.53
LSMEM1-201ENST00000312849 OVOS2A0A0G2JMS6 1433 aa11.74□□□□□ -0.53
LSMEM1-201ENST00000312849 NCAPD2Q15021 1401 aa11.74□□□□□ -0.53
LSMEM1-201ENST00000312849 MBD3O95983 291 aa11.74□□□□□ -0.53
LSMEM1-201ENST00000312849 ZGPATQ8N5A5 531 aaKnown RBP11.74□□□□□ -0.53
LSMEM1-201ENST00000312849 KIF1BPQ96EK5 621 aa11.74□□□□□ -0.53
LSMEM1-201ENST00000312849 EIF4A1P60842 406 aaKnown RBP11.73□□□□□ -0.53
LSMEM1-201ENST00000312849 NECTIN2Q92692 538 aa11.73□□□□□ -0.53
LSMEM1-201ENST00000312849 LTV1Q96GA3 475 aaPredicted RBP11.73□□□□□ -0.53
LSMEM1-201ENST00000312849 ANO2Q9NQ90 1003 aa11.73□□□□□ -0.53
LSMEM1-201ENST00000312849 ZDHHC9Q9Y397 364 aa11.73□□□□□ -0.53
LSMEM1-201ENST00000312849 PLEKHO1Q53GL0 409 aaPredicted RBP11.72□□□□□ -0.53
LSMEM1-201ENST00000312849 NUTM2GQ5VZR2 741 aa11.72□□□□□ -0.53
LSMEM1-201ENST00000312849 CRYBG1Q9Y4K1 1723 aa11.72□□□□□ -0.53
LSMEM1-201ENST00000312849 SURF6O75683 361 aaKnown RBP11.72□□□□□ -0.53
LSMEM1-201ENST00000312849 BRD1O95696 1058 aa11.72□□□□□ -0.53
LSMEM1-201ENST00000312849 NCLP19338 710 aaKnown RBP11.72□□□□□ -0.53
LSMEM1-201ENST00000312849 ZSCAN23Q3MJ62 389 aa11.72□□□□□ -0.53
LSMEM1-201ENST00000312849 AMOTQ4VCS5 1084 aa11.72□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 24.4 ms