RNA–Protein interactions for RNA: ENST00000310397.12

SNED1-201, Transcript of sushi, nidogen and EGF like domains 1, humanhuman

APPRIS P2 TSL 5 BASIC

Gene SNED1, Length 8,174 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNED1-201ENST00000310397 ZRSR2Q15696 482 aaKnown RBP15.4■□□□□ 0.06
SNED1-201ENST00000310397 IMMTQ16891 758 aaKnown RBP15.4■□□□□ 0.06
SNED1-201ENST00000310397 ABCC5O15440 1437 aa15.4■□□□□ 0.06
SNED1-201ENST00000310397 TBC1D9Q6ZT07 1266 aa15.4■□□□□ 0.06
SNED1-201ENST00000310397 KIF5CO60282 957 aa15.4■□□□□ 0.06
SNED1-201ENST00000310397 ZNF397Q8NF99 534 aaPredicted RBP15.4■□□□□ 0.06
SNED1-201ENST00000310397 SIL1Q9H173 461 aa15.4■□□□□ 0.06
SNED1-201ENST00000310397 ASXL1Q8IXJ9 1541 aa15.4■□□□□ 0.06
SNED1-201ENST00000310397 CNNM1Q9NRU3 951 aa15.4■□□□□ 0.06
SNED1-201ENST00000310397 LRRFIP2Q9Y608 721 aaKnown RBP15.4■□□□□ 0.06
SNED1-201ENST00000310397 MRC2Q9UBG0 1479 aa15.39■□□□□ 0.05
SNED1-201ENST00000310397 CCDC57Q2TAC2 916 aa15.39■□□□□ 0.05
SNED1-201ENST00000310397 CAMK4Q16566 473 aa15.39■□□□□ 0.05
SNED1-201ENST00000310397 KIAA1328Q86T90 577 aa15.39■□□□□ 0.05
SNED1-201ENST00000310397 MAGI1Q96QZ7 1491 aaPredicted RBP15.39■□□□□ 0.05
SNED1-201ENST00000310397 SCAF11Q99590 1463 aaKnown RBP15.39■□□□□ 0.05
SNED1-201ENST00000310397 GOLGA6L9A6NEM1 432 aa15.39■□□□□ 0.05
SNED1-201ENST00000310397 CASQ1P31415 396 aa15.39■□□□□ 0.05
SNED1-201ENST00000310397 HDAC1Q13547 482 aaPredicted RBP15.39■□□□□ 0.05
SNED1-201ENST00000310397 ADCY5O95622 1261 aa15.39■□□□□ 0.05
SNED1-201ENST00000310397 ATF3P18847 181 aa15.39■□□□□ 0.05
SNED1-201ENST00000310397 HS1BP3Q53T59 392 aa15.39■□□□□ 0.05
SNED1-201ENST00000310397 CCDC83Q8IWF9 413 aa15.39■□□□□ 0.05
SNED1-201ENST00000310397 IL1RAPL2Q9NP60 686 aa15.39■□□□□ 0.05
SNED1-201ENST00000310397 SKIDA1Q1XH10 827 aa15.38■□□□□ 0.05
SNED1-201ENST00000310397 USP25Q9UHP3 1055 aa15.38■□□□□ 0.05
SNED1-201ENST00000310397 UNC13AQ9UPW8 1703 aa15.38■□□□□ 0.05
SNED1-201ENST00000310397 IL16Q14005 1332 aa15.38■□□□□ 0.05
SNED1-201ENST00000310397 NUTM2GQ5VZR2 741 aa15.38■□□□□ 0.05
SNED1-201ENST00000310397 KIAA0586Q9BVV6 1533 aa15.38■□□□□ 0.05
SNED1-201ENST00000310397 GNAT3A8MTJ3 354 aa15.37■□□□□ 0.05
SNED1-201ENST00000310397 HSP90AB3PQ58FF7 597 aa15.37■□□□□ 0.05
SNED1-201ENST00000310397 LRSAM1Q6UWE0 723 aa15.37■□□□□ 0.05
SNED1-201ENST00000310397 C16orf45Q96MC5 204 aaPredicted RBP15.37■□□□□ 0.05
SNED1-201ENST00000310397 KRT18P05783 430 aaKnown RBP15.37■□□□□ 0.05
SNED1-201ENST00000310397 TOP1P11387 765 aaKnown RBP15.37■□□□□ 0.05
SNED1-201ENST00000310397 POTEB2H3BUK9 544 aa15.36■□□□□ 0.05
SNED1-201ENST00000310397 ZSCAN23Q3MJ62 389 aa15.36■□□□□ 0.05
SNED1-201ENST00000310397 JAKMIP3Q5VZ66 844 aa15.36■□□□□ 0.05
SNED1-201ENST00000310397 ARHGEF11O15085 1522 aa15.36■□□□□ 0.05
SNED1-201ENST00000310397 SHTN1A0MZ66 631 aa15.36■□□□□ 0.05
SNED1-201ENST00000310397 OSCARQ8IYS5 282 aa15.36■□□□□ 0.05
SNED1-201ENST00000310397 FKBP4Q02790 459 aaKnown RBP eCLIP15.36■□□□□ 0.05
SNED1-201ENST00000310397 STX1AQ16623 288 aa15.36■□□□□ 0.05
SNED1-201ENST00000310397 SNX21Q969T3 373 aa15.36■□□□□ 0.05
SNED1-201ENST00000310397 STX6O43752 255 aa15.36■□□□□ 0.05
SNED1-201ENST00000310397 SEPT7Q16181 437 aaKnown RBP15.36■□□□□ 0.05
SNED1-201ENST00000310397 CENPHQ9H3R5 247 aa15.36■□□□□ 0.05
SNED1-201ENST00000310397 INCENPQ9NQS7 918 aa15.36■□□□□ 0.05
SNED1-201ENST00000310397 BTBD11A6QL63 1104 aa15.36■□□□□ 0.05
SNED1-201ENST00000310397 TATP17735 454 aaPredicted RBP15.36■□□□□ 0.05
SNED1-201ENST00000310397 ZNF530Q6P9A1 599 aaPredicted RBP15.36■□□□□ 0.05
SNED1-201ENST00000310397 CEP126Q9P2H0 1117 aa15.35■□□□□ 0.05
SNED1-201ENST00000310397 CCDC61Q9Y6R9 512 aa15.35■□□□□ 0.05
SNED1-201ENST00000310397 PPP4R3BQ5MIZ7 849 aa15.35■□□□□ 0.05
SNED1-201ENST00000310397 KDM4AO75164 1064 aa15.35■□□□□ 0.05
SNED1-201ENST00000310397 UBAC1Q9BSL1 405 aa15.35■□□□□ 0.05
SNED1-201ENST00000310397 BMP2KQ9NSY1 1161 aaPredicted RBP15.35■□□□□ 0.05
SNED1-201ENST00000310397 CCDC196A0A1B0GTZ2 297 aa15.34■□□□□ 0.05
SNED1-201ENST00000310397 URI1O94763 535 aaPredicted RBP15.34■□□□□ 0.05
SNED1-201ENST00000310397 EIF5P55010 431 aaKnown RBP15.34■□□□□ 0.05
SNED1-201ENST00000310397 ANKRD18AQ8IVF6 992 aa15.34■□□□□ 0.05
SNED1-201ENST00000310397 NUCB1Q02818 461 aa15.34■□□□□ 0.05
SNED1-201ENST00000310397 FERMT3Q86UX7 667 aa15.34■□□□□ 0.05
SNED1-201ENST00000310397 DDX11Q96FC9 970 aa15.34■□□□□ 0.05
SNED1-201ENST00000310397 NEFHP12036 1026 aa15.34■□□□□ 0.05
SNED1-201ENST00000310397 SKAP1Q86WV1 359 aa15.34■□□□□ 0.05
SNED1-201ENST00000310397 XRCC6P12956 609 aaKnown RBP eCLIP15.33■□□□□ 0.05
SNED1-201ENST00000310397 CCDC171Q6TFL3 1326 aa15.33■□□□□ 0.05
SNED1-201ENST00000310397 C8orf76Q96K31 380 aa15.33■□□□□ 0.05
SNED1-201ENST00000310397 FAM193AP78312 1265 aa15.33■□□□□ 0.04
SNED1-201ENST00000310397 TANGO6Q9C0B7 1094 aa15.33■□□□□ 0.04
SNED1-201ENST00000310397 PRDM10Q9NQV6 1147 aa15.33■□□□□ 0.04
SNED1-201ENST00000310397 ZNF165P49910 485 aa15.33■□□□□ 0.04
SNED1-201ENST00000310397 BMS1Q14692 1282 aaKnown RBP15.33■□□□□ 0.04
SNED1-201ENST00000310397 RRS1Q15050 365 aaKnown RBP15.33■□□□□ 0.04
SNED1-201ENST00000310397 PRPF40BQ6NWY9 871 aaKnown RBP15.32■□□□□ 0.04
SNED1-201ENST00000310397 SNAPC4Q5SXM2 1469 aa15.32■□□□□ 0.04
SNED1-201ENST00000310397 IGHDP01880 384 aa15.32■□□□□ 0.04
SNED1-201ENST00000310397 TXNDC2Q86VQ3 553 aa15.32■□□□□ 0.04
SNED1-201ENST00000310397 SPG7Q9UQ90 795 aa15.32■□□□□ 0.04
SNED1-201ENST00000310397 LAMC3Q9Y6N6 1575 aa15.32■□□□□ 0.04
SNED1-201ENST00000310397 SPA17Q15506 151 aa15.32■□□□□ 0.04
SNED1-201ENST00000310397 KIF4BQ2VIQ3 1234 aa15.32■□□□□ 0.04
SNED1-201ENST00000310397 NUTM1Q86Y26 1132 aa15.32■□□□□ 0.04
SNED1-201ENST00000310397 PHAXQ9H814 394 aaKnown RBP15.32■□□□□ 0.04
SNED1-201ENST00000310397 IKQ13123 557 aaPredicted RBP15.31■□□□□ 0.04
SNED1-201ENST00000310397 NUP133Q8WUM0 1156 aa15.31■□□□□ 0.04
SNED1-201ENST00000310397 TDO2P48775 406 aa15.31■□□□□ 0.04
SNED1-201ENST00000310397 CCDC150Q8NCX0 1101 aa15.31■□□□□ 0.04
SNED1-201ENST00000310397 ANAPC15P60006 121 aa15.31■□□□□ 0.04
SNED1-201ENST00000310397 ENOX2Q16206 610 aaKnown RBP15.31■□□□□ 0.04
SNED1-201ENST00000310397 TTC22Q5TAA0 569 aa15.31■□□□□ 0.04
SNED1-201ENST00000310397 ZSCAN16Q9H4T2 348 aaPredicted RBP15.31■□□□□ 0.04
SNED1-201ENST00000310397 SMARCA5O60264 1052 aaPredicted RBP15.31■□□□□ 0.04
SNED1-201ENST00000310397 TAF4BQ92750 862 aa15.31■□□□□ 0.04
SNED1-201ENST00000310397 SNW1Q13573 536 aaKnown RBP15.31■□□□□ 0.04
SNED1-201ENST00000310397 ARHGAP45Q92619 1136 aa15.31■□□□□ 0.04
SNED1-201ENST00000310397 MPHOSPH8Q99549 860 aa15.31■□□□□ 0.04
SNED1-201ENST00000310397 AKAP2Q9Y2D5 859 aa15.31■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 11.7 ms