RNA–Protein interactions for RNA: ENST00000309996.6

SPTBN2-201, Transcript of spectrin beta, non-erythrocytic 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SPTBN2, Length 7,866 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTBN2-201ENST00000309996 CASQ1P31415 396 aa14.96□□□□□ -0.01
SPTBN2-201ENST00000309996 IFFO1Q0D2I5 559 aa14.96□□□□□ -0.01
SPTBN2-201ENST00000309996 SRCIN1Q9C0H9 1055 aa14.96□□□□□ -0.01
SPTBN2-201ENST00000309996 GBP3Q9H0R5 595 aa14.96□□□□□ -0.01
SPTBN2-201ENST00000309996 GCOM1H8Y6P7 765 aaPredicted RBP14.96□□□□□ -0.01
SPTBN2-201ENST00000309996 MYZAPP0CAP1 466 aa14.96□□□□□ -0.01
SPTBN2-201ENST00000309996 CCDC178Q5BJE1 867 aa14.96□□□□□ -0.01
SPTBN2-201ENST00000309996 DZIP1Q86YF9 867 aaKnown RBP14.96□□□□□ -0.01
SPTBN2-201ENST00000309996 SLC4A2P04920 1241 aa14.96□□□□□ -0.02
SPTBN2-201ENST00000309996 PDZRN3Q9UPQ7 1066 aa14.96□□□□□ -0.02
SPTBN2-201ENST00000309996 MCM3P25205 808 aa14.95□□□□□ -0.02
SPTBN2-201ENST00000309996 PDRG1Q9NUG6 133 aa14.95□□□□□ -0.02
SPTBN2-201ENST00000309996 SAMM50Q9Y512 469 aa14.95□□□□□ -0.02
SPTBN2-201ENST00000309996 MYO1BO43795 1136 aa14.95□□□□□ -0.02
SPTBN2-201ENST00000309996 FILIP1Q7Z7B0 1213 aa14.95□□□□□ -0.02
SPTBN2-201ENST00000309996 UBXN4Q92575 508 aa14.95□□□□□ -0.02
SPTBN2-201ENST00000309996 TIGD1Q96MW7 591 aa14.95□□□□□ -0.02
SPTBN2-201ENST00000309996 ECM2O94769 699 aaPredicted RBP14.95□□□□□ -0.02
SPTBN2-201ENST00000309996 AACSQ86V21 672 aa14.95□□□□□ -0.02
SPTBN2-201ENST00000309996 VPS36Q86VN1 386 aa14.95□□□□□ -0.02
SPTBN2-201ENST00000309996 SERPINA10Q9UK55 444 aa14.95□□□□□ -0.02
SPTBN2-201ENST00000309996 STARD3NLO95772 234 aa14.94□□□□□ -0.02
SPTBN2-201ENST00000309996 BMS1Q14692 1282 aaKnown RBP14.94□□□□□ -0.02
SPTBN2-201ENST00000309996 GRPEL1Q9HAV7 217 aa14.94□□□□□ -0.02
SPTBN2-201ENST00000309996 TNNT1P13805 278 aa14.94□□□□□ -0.02
SPTBN2-201ENST00000309996 FKBP15Q5T1M5 1219 aa14.94□□□□□ -0.02
SPTBN2-201ENST00000309996 CACNA2D4Q7Z3S7 1137 aa14.94□□□□□ -0.02
SPTBN2-201ENST00000309996 TICAM2Q86XR7 235 aa14.93□□□□□ -0.02
SPTBN2-201ENST00000309996 ODF2LQ9ULJ1 636 aa14.93□□□□□ -0.02
SPTBN2-201ENST00000309996 TMCO5BA8MYB1 307 aa14.93□□□□□ -0.02
SPTBN2-201ENST00000309996 PRKAR2BP31323 418 aa14.93□□□□□ -0.02
SPTBN2-201ENST00000309996 KRT32Q14532 448 aa14.93□□□□□ -0.02
SPTBN2-201ENST00000309996 CWC27Q6UX04 472 aaKnown RBP14.93□□□□□ -0.02
SPTBN2-201ENST00000309996 LUZP1Q86V48 1076 aa14.93□□□□□ -0.02
SPTBN2-201ENST00000309996 PRDM11Q9NQV5 511 aa14.93□□□□□ -0.02
SPTBN2-201ENST00000309996 KIF5CO60282 957 aa14.93□□□□□ -0.02
SPTBN2-201ENST00000309996 JAKMIP1Q96N16 626 aaKnown RBP14.93□□□□□ -0.02
SPTBN2-201ENST00000309996 SREK1Q8WXA9 508 aaKnown RBP14.92□□□□□ -0.02
SPTBN2-201ENST00000309996 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP14.92□□□□□ -0.02
SPTBN2-201ENST00000309996 SYNCQ9H7C4 482 aa14.92□□□□□ -0.02
SPTBN2-201ENST00000309996 BRPF3Q9ULD4 1205 aa14.92□□□□□ -0.02
SPTBN2-201ENST00000309996 MINDY4BA8MYZ0 360 aa14.91□□□□□ -0.02
SPTBN2-201ENST00000309996 FGFR1OPO95684 399 aaKnown RBP14.91□□□□□ -0.02
SPTBN2-201ENST00000309996 SLF2Q8IX21 1173 aa14.91□□□□□ -0.02
SPTBN2-201ENST00000309996 CKAP2LQ8IYA6 745 aa14.91□□□□□ -0.02
SPTBN2-201ENST00000309996 BICD1Q96G01 975 aa14.91□□□□□ -0.02
SPTBN2-201ENST00000309996 IDH1O75874 414 aaKnown RBP14.91□□□□□ -0.02
SPTBN2-201ENST00000309996 ZNF444Q8N0Y2 327 aaPredicted RBP14.91□□□□□ -0.02
SPTBN2-201ENST00000309996 TCP11L2Q8N4U5 519 aa14.91□□□□□ -0.02
SPTBN2-201ENST00000309996 DDX11Q96FC9 970 aa14.91□□□□□ -0.02
SPTBN2-201ENST00000309996 CCDC175P0C221 793 aa14.91□□□□□ -0.02
SPTBN2-201ENST00000309996 MAP3K11Q16584 847 aa14.91□□□□□ -0.02
SPTBN2-201ENST00000309996 BEGAINQ9BUH8 593 aa14.91□□□□□ -0.02
SPTBN2-201ENST00000309996 PNISRQ8TF01 805 aaKnown RBP14.91□□□□□ -0.02
SPTBN2-201ENST00000309996 ZSCAN31Q96LW9 406 aaPredicted RBP14.91□□□□□ -0.02
SPTBN2-201ENST00000309996 ADAMTS8Q9UP79 889 aa14.91□□□□□ -0.02
SPTBN2-201ENST00000309996 WIZO95785 1651 aa14.91□□□□□ -0.02
SPTBN2-201ENST00000309996 EXOSC9Q06265 439 aaKnown RBP14.91□□□□□ -0.02
SPTBN2-201ENST00000309996 SYCP3Q8IZU3 236 aa14.91□□□□□ -0.02
SPTBN2-201ENST00000309996 CCDC85AQ96PX6 553 aaPredicted RBP14.91□□□□□ -0.02
SPTBN2-201ENST00000309996 TXNDC2Q86VQ3 553 aa14.91□□□□□ -0.02
SPTBN2-201ENST00000309996 PRPF31Q8WWY3 499 aaKnown RBP14.91□□□□□ -0.02
SPTBN2-201ENST00000309996 AIDAQ96BJ3 306 aa14.91□□□□□ -0.02
SPTBN2-201ENST00000309996 BRD4O60885 1362 aaPredicted RBP14.9□□□□□ -0.02
SPTBN2-201ENST00000309996 ZSCAN12O43309 604 aa14.9□□□□□ -0.02
SPTBN2-201ENST00000309996 CCDC117Q8IWD4 279 aaPredicted RBP14.9□□□□□ -0.02
SPTBN2-201ENST00000309996 TAOK3Q9H2K8 898 aa14.9□□□□□ -0.02
SPTBN2-201ENST00000309996 PPP6R1Q9UPN7 881 aa14.9□□□□□ -0.02
SPTBN2-201ENST00000309996 CUX1P39880 1505 aa14.9□□□□□ -0.02
SPTBN2-201ENST00000309996 CETN1Q12798 172 aa14.9□□□□□ -0.02
SPTBN2-201ENST00000309996 PTPRGP23470 1445 aa14.9□□□□□ -0.02
SPTBN2-201ENST00000309996 PDIA4P13667 645 aaKnown RBP14.9□□□□□ -0.02
SPTBN2-201ENST00000309996 PDCL2Q8N4E4 241 aa14.9□□□□□ -0.02
SPTBN2-201ENST00000309996 PPP1R14CQ8TAE6 165 aa14.9□□□□□ -0.02
SPTBN2-201ENST00000309996 NDC80O14777 642 aa14.89□□□□□ -0.03
SPTBN2-201ENST00000309996 RAB34Q9BZG1 259 aa14.89□□□□□ -0.03
SPTBN2-201ENST00000309996 CASTP20810 708 aaKnown RBP14.89□□□□□ -0.03
SPTBN2-201ENST00000309996 MICALCLQ6ZW33 695 aa14.89□□□□□ -0.03
SPTBN2-201ENST00000309996 ADAMTS2O95450 1211 aa14.89□□□□□ -0.03
SPTBN2-201ENST00000309996 TMEM132EQ6IEE7 984 aa14.89□□□□□ -0.03
SPTBN2-201ENST00000309996 MAPK8IP2Q13387 824 aaPredicted RBP14.89□□□□□ -0.03
SPTBN2-201ENST00000309996 NCBP1Q09161 790 aaKnown RBP14.89□□□□□ -0.03
SPTBN2-201ENST00000309996 KLHL10Q6JEL2 608 aa14.89□□□□□ -0.03
SPTBN2-201ENST00000309996 CCDC7Q96M83 1385 aa14.89□□□□□ -0.03
SPTBN2-201ENST00000309996 FYCO1Q9BQS8 1478 aa14.89□□□□□ -0.03
SPTBN2-201ENST00000309996 PTPN14Q15678 1187 aa14.89□□□□□ -0.03
SPTBN2-201ENST00000309996 CAMK4Q16566 473 aa14.89□□□□□ -0.03
SPTBN2-201ENST00000309996 TMEM266Q2M3C6 531 aa14.89□□□□□ -0.03
SPTBN2-201ENST00000309996 ZNF622Q969S3 477 aaKnown RBP eCLIP14.89□□□□□ -0.03
SPTBN2-201ENST00000309996 KIF2AO00139 706 aaPredicted RBP14.88□□□□□ -0.03
SPTBN2-201ENST00000309996 APBB1IPQ7Z5R6 666 aaPredicted RBP14.88□□□□□ -0.03
SPTBN2-201ENST00000309996 CEP126Q9P2H0 1117 aa14.88□□□□□ -0.03
SPTBN2-201ENST00000309996 RNF187Q5TA31 235 aaPredicted RBP14.88□□□□□ -0.03
SPTBN2-201ENST00000309996 BTBD11A6QL63 1104 aa14.88□□□□□ -0.03
SPTBN2-201ENST00000309996 SFPQP23246 707 aaKnown RBP eCLIP14.88□□□□□ -0.03
SPTBN2-201ENST00000309996 SRGAP3O43295 1099 aa14.88□□□□□ -0.03
SPTBN2-201ENST00000309996 METTL24Q5JXM2 366 aa14.88□□□□□ -0.03
SPTBN2-201ENST00000309996 IKBKGQ9Y6K9 419 aa14.88□□□□□ -0.03
SPTBN2-201ENST00000309996 BAG4O95429 457 aaKnown RBP14.87□□□□□ -0.03
SPTBN2-201ENST00000309996 NLRP5P59047 1200 aa14.87□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms