RNA–Protein interactions for RNA: ENST00000309279.11

CHD6-201, Transcript of chromodomain helicase DNA binding protein 6, humanhuman

TSL 1 (best) BASIC

Gene CHD6, Length 1,635 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD6-201ENST00000309279 HMOX1P09601 288 aa10.86□□□□□ -0.67
CHD6-201ENST00000309279 PDE3BQ13370 1112 aa10.86□□□□□ -0.67
CHD6-201ENST00000309279 ANO8Q9HCE9 1232 aaPredicted RBP10.86□□□□□ -0.67
CHD6-201ENST00000309279 E9PSI1 815 aa10.85□□□□□ -0.67
CHD6-201ENST00000309279 U2AF1L5P0DN76 240 aaPredicted RBP10.85□□□□□ -0.67
CHD6-201ENST00000309279 U2AF1Q01081 240 aaKnown RBP eCLIP10.85□□□□□ -0.67
CHD6-201ENST00000309279 CCDC184Q52MB2 194 aa10.85□□□□□ -0.67
CHD6-201ENST00000309279 MARCH10Q8NA82 808 aaPredicted RBP10.85□□□□□ -0.67
CHD6-201ENST00000309279 TRAIPQ9BWF2 469 aa10.85□□□□□ -0.67
CHD6-201ENST00000309279 BCL9O00512 1426 aa10.85□□□□□ -0.67
CHD6-201ENST00000309279 AMOTQ4VCS5 1084 aa10.84□□□□□ -0.67
CHD6-201ENST00000309279 SPG7Q9UQ90 795 aa10.84□□□□□ -0.67
CHD6-201ENST00000309279 CYP27B1O15528 508 aa10.83□□□□□ -0.68
CHD6-201ENST00000309279 PLEKHO1Q53GL0 409 aaPredicted RBP10.83□□□□□ -0.68
CHD6-201ENST00000309279 FAM196AQ6ZSG2 479 aa10.83□□□□□ -0.68
CHD6-201ENST00000309279 PNISRQ8TF01 805 aaKnown RBP10.83□□□□□ -0.68
CHD6-201ENST00000309279 PLEKHF1Q96S99 279 aa10.83□□□□□ -0.68
CHD6-201ENST00000309279 PCDH11XQ9BZA7 1347 aa10.83□□□□□ -0.68
CHD6-201ENST00000309279 PCDH11YQ9BZA8 1340 aa10.83□□□□□ -0.68
CHD6-201ENST00000309279 PRKAR2BP31323 418 aa10.82□□□□□ -0.68
CHD6-201ENST00000309279 NKX1-1Q15270 411 aaPredicted RBP10.82□□□□□ -0.68
CHD6-201ENST00000309279 DDX54Q8TDD1 881 aaKnown RBP10.82□□□□□ -0.68
CHD6-201ENST00000309279 MRS2Q9HD23 443 aa10.82□□□□□ -0.68
CHD6-201ENST00000309279 ADAMTS8Q9UP79 889 aa10.82□□□□□ -0.68
CHD6-201ENST00000309279 SBF2Q86WG5 1849 aa10.82□□□□□ -0.68
CHD6-201ENST00000309279 CCER2I3L3R5 266 aa10.81□□□□□ -0.68
CHD6-201ENST00000309279 WDR43Q15061 677 aaKnown RBP eCLIP10.81□□□□□ -0.68
CHD6-201ENST00000309279 FAM182BQ5T319 152 aa10.81□□□□□ -0.68
CHD6-201ENST00000309279 IFNL2Q8IZJ0 200 aa10.81□□□□□ -0.68
CHD6-201ENST00000309279 PHACTR3Q96KR7 559 aa10.81□□□□□ -0.68
CHD6-201ENST00000309279 PNNQ9H307 717 aaKnown RBP10.81□□□□□ -0.68
CHD6-201ENST00000309279 PRDM16Q9HAZ2 1276 aa10.81□□□□□ -0.68
CHD6-201ENST00000309279 PHKG2P15735 406 aa10.8□□□□□ -0.68
CHD6-201ENST00000309279 MTHFSDQ2M296 383 aaKnown RBP10.8□□□□□ -0.68
CHD6-201ENST00000309279 KAT6BQ8WYB5 2073 aa10.8□□□□□ -0.68
CHD6-201ENST00000309279 ECM2O94769 699 aaPredicted RBP10.8□□□□□ -0.68
CHD6-201ENST00000309279 MIER1Q8N108 512 aa10.8□□□□□ -0.68
CHD6-201ENST00000309279 ZNF530Q6P9A1 599 aaPredicted RBP10.79□□□□□ -0.68
CHD6-201ENST00000309279 GAS2L2Q8NHY3 880 aa10.79□□□□□ -0.68
CHD6-201ENST00000309279 HSP90AB1P08238 724 aaKnown RBP10.78□□□□□ -0.68
CHD6-201ENST00000309279 AKAP4Q5JQC9 854 aa10.78□□□□□ -0.68
CHD6-201ENST00000309279 ADAMTS7Q9UKP4 1686 aa10.77□□□□□ -0.68
CHD6-201ENST00000309279 NCLP19338 710 aaKnown RBP10.77□□□□□ -0.68
CHD6-201ENST00000309279 CCDC27Q2M243 656 aa10.77□□□□□ -0.68
CHD6-201ENST00000309279 C1orf141Q5JVX7 400 aa10.77□□□□□ -0.68
CHD6-201ENST00000309279 CCDC125Q86Z20 511 aa10.77□□□□□ -0.68
CHD6-201ENST00000309279 RUNDC1Q96C34 613 aa10.77□□□□□ -0.68
CHD6-201ENST00000309279 DCAF5Q96JK2 942 aa10.77□□□□□ -0.68
CHD6-201ENST00000309279 VIRMAQ69YN4 1812 aaKnown RBP10.77□□□□□ -0.69
CHD6-201ENST00000309279 SCN11AQ9UI33 1791 aa10.77□□□□□ -0.69
CHD6-201ENST00000309279 DLG5Q8TDM6 1919 aa10.77□□□□□ -0.69
CHD6-201ENST00000309279 NEFMP07197 916 aa10.76□□□□□ -0.69
CHD6-201ENST00000309279 UPF1Q92900 1129 aaKnown RBP eCLIP10.76□□□□□ -0.69
CHD6-201ENST00000309279 DOT1LQ8TEK3 1739 aa10.76□□□□□ -0.69
CHD6-201ENST00000309279 TOGARAM1Q9Y4F4 1720 aa10.76□□□□□ -0.69
CHD6-201ENST00000309279 NHSQ6T4R5 1651 aa10.76□□□□□ -0.69
CHD6-201ENST00000309279 ITGB4P16144 1822 aa10.76□□□□□ -0.69
CHD6-201ENST00000309279 GNAT3A8MTJ3 354 aa10.76□□□□□ -0.69
CHD6-201ENST00000309279 TRIM37O94972 964 aa10.76□□□□□ -0.69
CHD6-201ENST00000309279 TEX2Q8IWB9 1127 aa10.76□□□□□ -0.69
CHD6-201ENST00000309279 PIAS4Q8N2W9 510 aaPredicted RBP10.76□□□□□ -0.69
CHD6-201ENST00000309279 KDM6AO15550 1401 aaPredicted RBP10.76□□□□□ -0.69
CHD6-201ENST00000309279 TNS1Q9HBL0 1735 aaKnown RBP10.75□□□□□ -0.69
CHD6-201ENST00000309279 MAPK8IP3Q9UPT6 1336 aa10.75□□□□□ -0.69
CHD6-201ENST00000309279 ERVV-2B6SEH9 535 aa10.75□□□□□ -0.69
CHD6-201ENST00000309279 RGL2O15211 777 aa10.75□□□□□ -0.69
CHD6-201ENST00000309279 KCNQ2O43526 872 aa10.75□□□□□ -0.69
CHD6-201ENST00000309279 HTATSF1O43719 755 aaKnown RBP10.75□□□□□ -0.69
CHD6-201ENST00000309279 PRIM1P49642 420 aaKnown RBP10.75□□□□□ -0.69
CHD6-201ENST00000309279 NFE2L2Q16236 605 aa10.75□□□□□ -0.69
CHD6-201ENST00000309279 MPRIPQ6WCQ1 1025 aa10.75□□□□□ -0.69
CHD6-201ENST00000309279 CCDC146Q8IYE0 955 aa10.75□□□□□ -0.69
CHD6-201ENST00000309279 MAP3K5Q99683 1374 aa10.75□□□□□ -0.69
CHD6-201ENST00000309279 TMPOP42166 694 aaKnown RBP10.74□□□□□ -0.69
CHD6-201ENST00000309279 PTF1AQ7RTS3 328 aa10.74□□□□□ -0.69
CHD6-201ENST00000309279 CCDC82Q8N4S0 544 aa10.74□□□□□ -0.69
CHD6-201ENST00000309279 IL17REQ8NFR9 667 aa10.74□□□□□ -0.69
CHD6-201ENST00000309279 ACSBG1Q96GR2 724 aa10.74□□□□□ -0.69
CHD6-201ENST00000309279 LGR6Q9HBX8 967 aa10.74□□□□□ -0.69
CHD6-201ENST00000309279 CEMIPQ8WUJ3 1361 aa10.74□□□□□ -0.69
CHD6-201ENST00000309279 SOCS7O14512 581 aa10.73□□□□□ -0.69
CHD6-201ENST00000309279 RNMTO43148 476 aaKnown RBP10.73□□□□□ -0.69
CHD6-201ENST00000309279 FAM9BQ8IZU0 186 aa10.73□□□□□ -0.69
CHD6-201ENST00000309279 GZF1Q9H116 711 aaPredicted RBP10.73□□□□□ -0.69
CHD6-201ENST00000309279 BTAF1O14981 1849 aa10.73□□□□□ -0.69
CHD6-201ENST00000309279 MRC1P22897 1456 aa10.72□□□□□ -0.69
CHD6-201ENST00000309279 APAF1O14727 1248 aa10.72□□□□□ -0.69
CHD6-201ENST00000309279 PLSCR1O15162 318 aa10.72□□□□□ -0.69
CHD6-201ENST00000309279 RIPK4P57078 832 aa10.72□□□□□ -0.69
CHD6-201ENST00000309279 NFATC2IPQ8NCF5 419 aa10.72□□□□□ -0.69
CHD6-201ENST00000309279 PIGBQ92521 554 aa10.72□□□□□ -0.69
CHD6-201ENST00000309279 SYTL4Q96C24 671 aaPredicted RBP10.72□□□□□ -0.69
CHD6-201ENST00000309279 SLC52A2Q9HAB3 445 aa10.72□□□□□ -0.69
CHD6-201ENST00000309279 RGPD3A6NKT7 1758 aaPredicted RBP10.71□□□□□ -0.69
CHD6-201ENST00000309279 RGPD4Q7Z3J3 1758 aa10.71□□□□□ -0.69
CHD6-201ENST00000309279 SF3B2Q13435 895 aaKnown RBP10.71□□□□□ -0.69
CHD6-201ENST00000309279 ZNF526Q8TF50 670 aaPredicted RBP10.71□□□□□ -0.69
CHD6-201ENST00000309279 RTF1Q92541 710 aaKnown RBP10.71□□□□□ -0.69
CHD6-201ENST00000309279 TMOD3Q9NYL9 352 aa10.71□□□□□ -0.69
CHD6-201ENST00000309279 SIPA1L3O60292 1781 aaPredicted RBP10.71□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 17.6 ms