RNA–Protein interactions for RNA: ENST00000308537.4

PDZRN3-202, Transcript of PDZ domain containing ring finger 3, humanhuman

TSL 1 (best) BASIC

Gene PDZRN3, Length 1,136 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDZRN3-202ENST00000308537 CNGB1Q14028 1251 aaPredicted RBP26.85■■□□□ 1.89
PDZRN3-202ENST00000308537 COL5A3P25940 1745 aaPredicted RBP26.85■■□□□ 1.89
PDZRN3-202ENST00000308537 FHDC1Q9C0D6 1143 aaPredicted RBP26.84■■□□□ 1.89
PDZRN3-202ENST00000308537 MAP3K5Q99683 1374 aa26.84■■□□□ 1.89
PDZRN3-202ENST00000308537 SYT17Q9BSW7 474 aa26.83■■□□□ 1.89
PDZRN3-202ENST00000308537 MRC1P22897 1456 aa26.82■■□□□ 1.88
PDZRN3-202ENST00000308537 ARXQ96QS3 562 aa26.82■■□□□ 1.88
PDZRN3-202ENST00000308537 CICQ96RK0 1608 aaPredicted RBP26.81■■□□□ 1.88
PDZRN3-202ENST00000308537 MYH14Q7Z406 1995 aaKnown RBP26.8■■□□□ 1.88
PDZRN3-202ENST00000308537 C1orf141Q5JVX7 400 aa26.8■■□□□ 1.88
PDZRN3-202ENST00000308537 SMIM5Q71RC9 77 aa26.8■■□□□ 1.88
PDZRN3-202ENST00000308537 MTHFSDQ2M296 383 aaKnown RBP26.79■■□□□ 1.88
PDZRN3-202ENST00000308537 AKAP4Q5JQC9 854 aa26.79■■□□□ 1.88
PDZRN3-202ENST00000308537 PPP2R1AP30153 589 aa26.78■■□□□ 1.88
PDZRN3-202ENST00000308537 ATP6V1AP38606 617 aa26.78■■□□□ 1.88
PDZRN3-202ENST00000308537 TJP1Q07157 1748 aa26.77■■□□□ 1.88
PDZRN3-202ENST00000308537 CABP4P57796 275 aa26.77■■□□□ 1.88
PDZRN3-202ENST00000308537 NFATC2IPQ8NCF5 419 aa26.77■■□□□ 1.88
PDZRN3-202ENST00000308537 LGR6Q9HBX8 967 aa26.77■■□□□ 1.88
PDZRN3-202ENST00000308537 HMGB2P26583 209 aaKnown RBP26.76■■□□□ 1.87
PDZRN3-202ENST00000308537 FLAD1Q8NFF5 587 aa26.74■■□□□ 1.87
PDZRN3-202ENST00000308537 AK7Q96M32 723 aa26.74■■□□□ 1.87
PDZRN3-202ENST00000308537 GOLGB1Q14789 3259 aaKnown RBP26.73■■□□□ 1.87
PDZRN3-202ENST00000308537 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP26.73■■□□□ 1.87
PDZRN3-202ENST00000308537 RNMTO43148 476 aaKnown RBP26.73■■□□□ 1.87
PDZRN3-202ENST00000308537 SSFA2P28290 1259 aa26.72■■□□□ 1.87
PDZRN3-202ENST00000308537 MSL1Q68DK7 614 aa26.72■■□□□ 1.87
PDZRN3-202ENST00000308537 SLC52A2Q9HAB3 445 aa26.72■■□□□ 1.87
PDZRN3-202ENST00000308537 SIPA1L3O60292 1781 aaPredicted RBP26.71■■□□□ 1.87
PDZRN3-202ENST00000308537 U2SURPO15042 1029 aaKnown RBP26.71■■□□□ 1.87
PDZRN3-202ENST00000308537 POLD1P28340 1107 aa26.71■■□□□ 1.87
PDZRN3-202ENST00000308537 RBM42Q9BTD8 480 aaKnown RBP26.7■■□□□ 1.86
PDZRN3-202ENST00000308537 RSPH6AQ9H0K4 717 aa26.7■■□□□ 1.86
PDZRN3-202ENST00000308537 UBR2Q8IWV8 1755 aa26.7■■□□□ 1.86
PDZRN3-202ENST00000308537 KCPQ6ZWJ8 1503 aa26.7■■□□□ 1.86
PDZRN3-202ENST00000308537 GNPATO15228 680 aa26.69■■□□□ 1.86
PDZRN3-202ENST00000308537 MSH5O43196 834 aa26.69■■□□□ 1.86
PDZRN3-202ENST00000308537 PHF14O94880 888 aa26.69■■□□□ 1.86
PDZRN3-202ENST00000308537 CNTNAP4Q9C0A0 1308 aa26.68■■□□□ 1.86
PDZRN3-202ENST00000308537 C4AP0C0L4 1744 aa26.68■■□□□ 1.86
PDZRN3-202ENST00000308537 RC3H1Q5TC82 1133 aaKnown RBP26.68■■□□□ 1.86
PDZRN3-202ENST00000308537 PHACTR3Q96KR7 559 aa26.67■■□□□ 1.86
PDZRN3-202ENST00000308537 PTCD1O75127 700 aaKnown RBP26.66■■□□□ 1.86
PDZRN3-202ENST00000308537 IL17REQ8NFR9 667 aa26.65■■□□□ 1.86
PDZRN3-202ENST00000308537 NLGN2Q8NFZ4 835 aa26.65■■□□□ 1.86
PDZRN3-202ENST00000308537 CFAP53Q96M91 514 aa26.65■■□□□ 1.86
PDZRN3-202ENST00000308537 PRKAR2BP31323 418 aa26.63■■□□□ 1.85
PDZRN3-202ENST00000308537 SLC39A6Q13433 755 aa26.63■■□□□ 1.85
PDZRN3-202ENST00000308537 CEMIPQ8WUJ3 1361 aa26.62■■□□□ 1.85
PDZRN3-202ENST00000308537 GAS2L2Q8NHY3 880 aa26.62■■□□□ 1.85
PDZRN3-202ENST00000308537 RPS6KA4O75676 772 aa26.61■■□□□ 1.85
PDZRN3-202ENST00000308537 RTCBQ9Y3I0 505 aaKnown RBP26.6■■□□□ 1.85
PDZRN3-202ENST00000308537 GNAT3A8MTJ3 354 aa26.59■■□□□ 1.85
PDZRN3-202ENST00000308537 CRKLP46109 303 aaKnown RBP26.59■■□□□ 1.85
PDZRN3-202ENST00000308537 ARHGEF1Q92888 912 aaKnown RBP26.59■■□□□ 1.85
PDZRN3-202ENST00000308537 ADRA2BP18089 450 aa26.58■■□□□ 1.85
PDZRN3-202ENST00000308537 INTS5Q6P9B9 1019 aaKnown RBP26.58■■□□□ 1.85
PDZRN3-202ENST00000308537 DNAJC10Q8IXB1 793 aa26.58■■□□□ 1.85
PDZRN3-202ENST00000308537 CHD4Q14839 1912 aa26.58■■□□□ 1.85
PDZRN3-202ENST00000308537 FCHSD2O94868 740 aa26.57■■□□□ 1.84
PDZRN3-202ENST00000308537 U2AF1L5P0DN76 240 aaPredicted RBP26.57■■□□□ 1.84
PDZRN3-202ENST00000308537 U2AF1Q01081 240 aaKnown RBP eCLIP26.57■■□□□ 1.84
PDZRN3-202ENST00000308537 TRAPPC3LQ5T215 181 aa26.57■■□□□ 1.84
PDZRN3-202ENST00000308537 KLHL34Q8N239 644 aa26.57■■□□□ 1.84
PDZRN3-202ENST00000308537 NUDCQ9Y266 331 aa26.57■■□□□ 1.84
PDZRN3-202ENST00000308537 KIF13BQ9NQT8 1826 aa26.56■■□□□ 1.84
PDZRN3-202ENST00000308537 KIAA1551Q9HCM1 1747 aa26.56■■□□□ 1.84
PDZRN3-202ENST00000308537 CD2APQ9Y5K6 639 aa26.55■■□□□ 1.84
PDZRN3-202ENST00000308537 CYP19A1P11511 503 aaPredicted RBP26.54■■□□□ 1.84
PDZRN3-202ENST00000308537 GYS1P13807 737 aa26.54■■□□□ 1.84
PDZRN3-202ENST00000308537 DLG5Q8TDM6 1919 aa26.53■■□□□ 1.84
PDZRN3-202ENST00000308537 DCAF8L1A6NGE4 600 aa26.53■■□□□ 1.84
PDZRN3-202ENST00000308537 YY1P25490 414 aa26.52■■□□□ 1.84
PDZRN3-202ENST00000308537 DDX10Q13206 875 aaKnown RBP26.52■■□□□ 1.84
PDZRN3-202ENST00000308537 VSIG10Q8N0Z9 540 aa26.52■■□□□ 1.84
PDZRN3-202ENST00000308537 SOS1Q07889 1333 aaPredicted RBP26.5■■□□□ 1.83
PDZRN3-202ENST00000308537 YBX3P16989 372 aaKnown RBP eCLIP26.5■■□□□ 1.83
PDZRN3-202ENST00000308537 ZNF496Q96IT1 587 aaPredicted RBP26.5■■□□□ 1.83
PDZRN3-202ENST00000308537 CCDC87Q9NVE4 849 aa26.5■■□□□ 1.83
PDZRN3-202ENST00000308537 USP42Q9H9J4 1324 aaKnown RBP26.49■■□□□ 1.83
PDZRN3-202ENST00000308537 MMP10P09238 476 aa26.49■■□□□ 1.83
PDZRN3-202ENST00000308537 ZNF790Q6PG37 636 aa26.49■■□□□ 1.83
PDZRN3-202ENST00000308537 PLEKHF1Q96S99 279 aa26.49■■□□□ 1.83
PDZRN3-202ENST00000308537 TEFQ10587 303 aa26.48■■□□□ 1.83
PDZRN3-202ENST00000308537 SRP68Q9UHB9 627 aaKnown RBP26.48■■□□□ 1.83
PDZRN3-202ENST00000308537 ZBTB1Q9Y2K1 713 aa26.48■■□□□ 1.83
PDZRN3-202ENST00000308537 HEG1Q9ULI3 1381 aa26.47■■□□□ 1.83
PDZRN3-202ENST00000308537 KCNQ3O43525 872 aa26.47■■□□□ 1.83
PDZRN3-202ENST00000308537 RFC4P35249 363 aa26.47■■□□□ 1.83
PDZRN3-202ENST00000308537 NLGN1Q8N2Q7 840 aa26.47■■□□□ 1.83
PDZRN3-202ENST00000308537 C10orf71Q711Q0 1435 aa26.47■■□□□ 1.83
PDZRN3-202ENST00000308537 RALBP1Q15311 655 aa26.46■■□□□ 1.83
PDZRN3-202ENST00000308537 GPR162Q16538 588 aa26.45■■□□□ 1.82
PDZRN3-202ENST00000308537 MCM10Q7L590 875 aa26.45■■□□□ 1.82
PDZRN3-202ENST00000308537 DCTN1Q14203 1278 aa26.44■■□□□ 1.82
PDZRN3-202ENST00000308537 FKBP8Q14318 412 aa26.44■■□□□ 1.82
PDZRN3-202ENST00000308537 PXDNLA1KZ92 1463 aa26.43■■□□□ 1.82
PDZRN3-202ENST00000308537 TTC5Q8N0Z6 440 aa26.43■■□□□ 1.82
PDZRN3-202ENST00000308537 COL15A1P39059 1388 aa26.43■■□□□ 1.82
PDZRN3-202ENST00000308537 HTATSF1O43719 755 aaKnown RBP26.42■■□□□ 1.82
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms