RNA–Protein interactions for RNA: ENST00000307859.4

TRIM40-205, Transcript of tripartite motif containing 40, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene TRIM40, Length 1,640 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM40-205ENST00000307859 CLUAP1Q96AJ1 413 aa15.21■□□□□ 0.02
TRIM40-205ENST00000307859 PKD1L3Q7Z443 1732 aa15.2■□□□□ 0.02
TRIM40-205ENST00000307859 ZC3H6P61129 1189 aaKnown RBP15.2■□□□□ 0.02
TRIM40-205ENST00000307859 SCN11AQ9UI33 1791 aa15.19■□□□□ 0.02
TRIM40-205ENST00000307859 CEMIPQ8WUJ3 1361 aa15.19■□□□□ 0.02
TRIM40-205ENST00000307859 PLEKHG5O94827 1062 aa15.19■□□□□ 0.02
TRIM40-205ENST00000307859 HAP1P54257 671 aaPredicted RBP15.19■□□□□ 0.02
TRIM40-205ENST00000307859 FTSJ3Q8IY81 847 aaKnown RBP15.19■□□□□ 0.02
TRIM40-205ENST00000307859 ARHGAP45Q92619 1136 aa15.19■□□□□ 0.02
TRIM40-205ENST00000307859 OVOS2A0A0G2JMS6 1433 aa15.18■□□□□ 0.02
TRIM40-205ENST00000307859 PLEKHG2Q9H7P9 1386 aa15.18■□□□□ 0.02
TRIM40-205ENST00000307859 DCAF8L1A6NGE4 600 aa15.18■□□□□ 0.02
TRIM40-205ENST00000307859 EN1Q05925 392 aaPredicted RBP15.18■□□□□ 0.02
TRIM40-205ENST00000307859 IL17REQ8NFR9 667 aa15.18■□□□□ 0.02
TRIM40-205ENST00000307859 BABAM1Q9NWV8 329 aa15.18■□□□□ 0.02
TRIM40-205ENST00000307859 ELL2O00472 640 aaPredicted RBP15.17■□□□□ 0.02
TRIM40-205ENST00000307859 AMOTQ4VCS5 1084 aa15.17■□□□□ 0.02
TRIM40-205ENST00000307859 CABLES1Q8TDN4 633 aa15.17■□□□□ 0.02
TRIM40-205ENST00000307859 TSPYL4Q9UJ04 414 aa15.17■□□□□ 0.02
TRIM40-205ENST00000307859 N4BP2Q86UW6 1770 aaPredicted RBP15.17■□□□□ 0.02
TRIM40-205ENST00000307859 PARP4Q9UKK3 1724 aaKnown RBP15.16■□□□□ 0.02
TRIM40-205ENST00000307859 PLEKHO1Q53GL0 409 aaPredicted RBP15.16■□□□□ 0.02
TRIM40-205ENST00000307859 KRT24Q2M2I5 525 aa15.15■□□□□ 0.02
TRIM40-205ENST00000307859 AKAP4Q5JQC9 854 aa15.15■□□□□ 0.02
TRIM40-205ENST00000307859 DDX19BQ9UMR2 479 aa15.15■□□□□ 0.02
TRIM40-205ENST00000307859 ABCC4O15439 1325 aa15.14■□□□□ 0.01
TRIM40-205ENST00000307859 SOS1Q07889 1333 aaPredicted RBP15.14■□□□□ 0.01
TRIM40-205ENST00000307859 TCERG1O14776 1098 aaKnown RBP15.14■□□□□ 0.01
TRIM40-205ENST00000307859 TAF7Q15545 349 aaPredicted RBP15.14■□□□□ 0.01
TRIM40-205ENST00000307859 ZNF530Q6P9A1 599 aaPredicted RBP15.14■□□□□ 0.01
TRIM40-205ENST00000307859 TMEM57Q8N5G2 664 aa15.14■□□□□ 0.01
TRIM40-205ENST00000307859 MIS18AQ9NYP9 233 aa15.14■□□□□ 0.01
TRIM40-205ENST00000307859 CCDC9Q9Y3X0 531 aaKnown RBP15.14■□□□□ 0.01
TRIM40-205ENST00000307859 NWD2Q9ULI1 1742 aa15.13■□□□□ 0.01
TRIM40-205ENST00000307859 MEGF6O75095 1541 aa15.13■□□□□ 0.01
TRIM40-205ENST00000307859 IGHDP01880 384 aa15.12■□□□□ 0.01
TRIM40-205ENST00000307859 ITPRIPQ8IWB1 547 aa15.12■□□□□ 0.01
TRIM40-205ENST00000307859 API5Q9BZZ5 524 aaKnown RBP15.12■□□□□ 0.01
TRIM40-205ENST00000307859 RBM19Q9Y4C8 960 aaKnown RBP15.12■□□□□ 0.01
TRIM40-205ENST00000307859 PCDHB15Q9Y5E8 787 aa15.12■□□□□ 0.01
TRIM40-205ENST00000307859 CHRNA2Q15822 529 aa15.11■□□□□ 0.01
TRIM40-205ENST00000307859 COL5A2P05997 1499 aaPredicted RBP15.1■□□□□ 0.01
TRIM40-205ENST00000307859 C1orf141Q5JVX7 400 aa15.1■□□□□ 0.01
TRIM40-205ENST00000307859 CAMKK2Q96RR4 588 aa15.1■□□□□ 0.01
TRIM40-205ENST00000307859 ZBTB40Q9NUA8 1239 aa15.1■□□□□ 0.01
TRIM40-205ENST00000307859 NLRP2Q9NX02 1062 aa15.1■□□□□ 0.01
TRIM40-205ENST00000307859 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP15.1■□□□□ 0.01
TRIM40-205ENST00000307859 SHANK3Q9BYB0 1731 aa15.1■□□□□ 0.01
TRIM40-205ENST00000307859 PTPRCP08575 1304 aa15.09■□□□□ 0.01
TRIM40-205ENST00000307859 A0A0G2JS52 829 aa15.09■□□□□ 0.01
TRIM40-205ENST00000307859 MYT1Q01538 1121 aa15.09■□□□□ 0.01
TRIM40-205ENST00000307859 EZH2Q15910 746 aaKnown RBP15.09■□□□□ 0.01
TRIM40-205ENST00000307859 RAPGEF4Q8WZA2 1011 aa15.09■□□□□ 0.01
TRIM40-205ENST00000307859 LGR6Q9HBX8 967 aa15.09■□□□□ 0.01
TRIM40-205ENST00000307859 RNMTO43148 476 aaKnown RBP15.08■□□□□ 0
TRIM40-205ENST00000307859 MRC1P22897 1456 aa15.08■□□□□ 0
TRIM40-205ENST00000307859 COL14A1Q05707 1796 aaKnown RBP15.08■□□□□ 0
TRIM40-205ENST00000307859 CSB-PGBD3P0DP91 1061 aa15.07■□□□□ 0
TRIM40-205ENST00000307859 CHMP4BQ9H444 224 aaKnown RBP15.07■□□□□ 0
TRIM40-205ENST00000307859 PRDM11Q9NQV5 511 aa15.07■□□□□ 0
TRIM40-205ENST00000307859 WDR17Q8IZU2 1322 aa15.07■□□□□ 0
TRIM40-205ENST00000307859 PLCH1Q4KWH8 1693 aa15.07■□□□□ 0
TRIM40-205ENST00000307859 TATP17735 454 aaPredicted RBP15.06■□□□□ 0
TRIM40-205ENST00000307859 HDAC1Q13547 482 aaPredicted RBP15.06■□□□□ 0
TRIM40-205ENST00000307859 FAM98CQ17RN3 349 aaKnown RBP15.06■□□□□ 0
TRIM40-205ENST00000307859 MPRIPQ6WCQ1 1025 aa15.06■□□□□ 0
TRIM40-205ENST00000307859 RWDD1Q9H446 243 aaPredicted RBP15.06■□□□□ 0
TRIM40-205ENST00000307859 KDM6AO15550 1401 aaPredicted RBP15.06■□□□□ 0
TRIM40-205ENST00000307859 ZBTB7BO15156 539 aaPredicted RBP15.06■□□□□ 0
TRIM40-205ENST00000307859 TEFQ10587 303 aa15.06■□□□□ 0
TRIM40-205ENST00000307859 SKAP1Q86WV1 359 aa15.06■□□□□ 0
TRIM40-205ENST00000307859 ZNF784Q8NCA9 323 aaPredicted RBP15.06■□□□□ 0
TRIM40-205ENST00000307859 SPON1Q9HCB6 807 aa15.06■□□□□ 0
TRIM40-205ENST00000307859 PPP1R1BQ9UD71 204 aaPredicted RBP15.06■□□□□ 0
TRIM40-205ENST00000307859 TNS1Q9HBL0 1735 aaKnown RBP15.05■□□□□ -0
TRIM40-205ENST00000307859 HOXB7P09629 217 aa15.05■□□□□ -0
TRIM40-205ENST00000307859 CCDC30Q5VVM6 783 aa15.05■□□□□ -0
TRIM40-205ENST00000307859 INTS3Q68E01 1043 aaKnown RBP15.05■□□□□ -0
TRIM40-205ENST00000307859 SPG7Q9UQ90 795 aa15.05■□□□□ -0
TRIM40-205ENST00000307859 WNK3Q9BYP7 1800 aa15.05■□□□□ -0
TRIM40-205ENST00000307859 SLC4A2P04920 1241 aa15.04■□□□□ -0
TRIM40-205ENST00000307859 EIF4A1P60842 406 aaKnown RBP15.04■□□□□ -0
TRIM40-205ENST00000307859 NBPF14Q5TI25 921 aa15.04■□□□□ -0
TRIM40-205ENST00000307859 C5P01031 1676 aa15.04■□□□□ -0
TRIM40-205ENST00000307859 PHKG2P15735 406 aa15.03■□□□□ -0
TRIM40-205ENST00000307859 STK31Q9BXU1 1019 aa15.03■□□□□ -0
TRIM40-205ENST00000307859 KCNQ2O43526 872 aa15.03■□□□□ -0
TRIM40-205ENST00000307859 C1QTNF8P60827 252 aa15.03■□□□□ -0
TRIM40-205ENST00000307859 HEG1Q9ULI3 1381 aa15.02■□□□□ -0
TRIM40-205ENST00000307859 PXDNLA1KZ92 1463 aa15.02■□□□□ -0
TRIM40-205ENST00000307859 BTBD11A6QL63 1104 aa15.02□□□□□ -0.01
TRIM40-205ENST00000307859 FAM196AQ6ZSG2 479 aa15.02□□□□□ -0.01
TRIM40-205ENST00000307859 G2E3Q7L622 706 aa15.02□□□□□ -0.01
TRIM40-205ENST00000307859 IFNL2Q8IZJ0 200 aa15.02□□□□□ -0.01
TRIM40-205ENST00000307859 LAMB4A4D0S4 1761 aa15.01□□□□□ -0.01
TRIM40-205ENST00000307859 UBR2Q8IWV8 1755 aa15□□□□□ -0.01
TRIM40-205ENST00000307859 PAPPAQ13219 1627 aa15□□□□□ -0.01
TRIM40-205ENST00000307859 SPATA31A5Q5VU36 1347 aa15□□□□□ -0.01
TRIM40-205ENST00000307859 SPATA31A7Q8IWB4 1347 aa15□□□□□ -0.01
TRIM40-205ENST00000307859 KCNQ3O43525 872 aa15□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms