RNA–Protein interactions for RNA: ENST00000307548.2

SHANK2-AS3-201, SHANK2 antisense RNA 3, humanhuman

TSL 1 (best) BASIC

Gene SHANK2-AS3, Length 1,683 nt, Biotype antisense RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK2-AS3-201ENST00000307548 MPRIPQ6WCQ1 1025 aa16.56■□□□□ 0.24
SHANK2-AS3-201ENST00000307548 SCN11AQ9UI33 1791 aa16.55■□□□□ 0.24
SHANK2-AS3-201ENST00000307548 EXOC5O00471 708 aa16.55■□□□□ 0.24
SHANK2-AS3-201ENST00000307548 RNMTO43148 476 aaKnown RBP16.55■□□□□ 0.24
SHANK2-AS3-201ENST00000307548 IRX6P78412 446 aaPredicted RBP16.55■□□□□ 0.24
SHANK2-AS3-201ENST00000307548 LAS1LQ9Y4W2 734 aaKnown RBP16.55■□□□□ 0.24
SHANK2-AS3-201ENST00000307548 MRC1P22897 1456 aa16.55■□□□□ 0.24
SHANK2-AS3-201ENST00000307548 BCAR3O75815 825 aa16.54■□□□□ 0.24
SHANK2-AS3-201ENST00000307548 DDB1Q16531 1140 aa16.54■□□□□ 0.24
SHANK2-AS3-201ENST00000307548 ALDH1L2Q3SY69 923 aa16.54■□□□□ 0.24
SHANK2-AS3-201ENST00000307548 VIRMAQ69YN4 1812 aaKnown RBP16.54■□□□□ 0.24
SHANK2-AS3-201ENST00000307548 HSP90AB1P08238 724 aaKnown RBP16.53■□□□□ 0.24
SHANK2-AS3-201ENST00000307548 BRPF1P55201 1214 aaPredicted RBP16.53■□□□□ 0.24
SHANK2-AS3-201ENST00000307548 DDX54Q8TDD1 881 aaKnown RBP16.53■□□□□ 0.24
SHANK2-AS3-201ENST00000307548 DCAF5Q96JK2 942 aa16.53■□□□□ 0.24
SHANK2-AS3-201ENST00000307548 VAMP4O75379 141 aa16.53■□□□□ 0.24
SHANK2-AS3-201ENST00000307548 PPP4R2Q9NY27 417 aa16.53■□□□□ 0.24
SHANK2-AS3-201ENST00000307548 SIPA1L3O60292 1781 aaPredicted RBP16.52■□□□□ 0.24
SHANK2-AS3-201ENST00000307548 TOGARAM1Q9Y4F4 1720 aa16.52■□□□□ 0.23
SHANK2-AS3-201ENST00000307548 SOCS7O14512 581 aa16.52■□□□□ 0.23
SHANK2-AS3-201ENST00000307548 PDE3AQ14432 1141 aa16.52■□□□□ 0.23
SHANK2-AS3-201ENST00000307548 TAF7Q15545 349 aaPredicted RBP16.52■□□□□ 0.23
SHANK2-AS3-201ENST00000307548 PLIN1O60240 522 aa16.51■□□□□ 0.23
SHANK2-AS3-201ENST00000307548 MARCH10Q8NA82 808 aaPredicted RBP16.51■□□□□ 0.23
SHANK2-AS3-201ENST00000307548 RBM6P78332 1123 aaKnown RBP16.5■□□□□ 0.23
SHANK2-AS3-201ENST00000307548 SOS1Q07889 1333 aaPredicted RBP16.49■□□□□ 0.23
SHANK2-AS3-201ENST00000307548 TWISTNBQ3B726 338 aaPredicted RBP16.49■□□□□ 0.23
SHANK2-AS3-201ENST00000307548 C8orf58Q8NAV2 365 aa16.49■□□□□ 0.23
SHANK2-AS3-201ENST00000307548 SSH1Q8WYL5 1049 aa16.49■□□□□ 0.23
SHANK2-AS3-201ENST00000307548 SLC52A2Q9HAB3 445 aa16.49■□□□□ 0.23
SHANK2-AS3-201ENST00000307548 ERVV-2B6SEH9 535 aa16.48■□□□□ 0.23
SHANK2-AS3-201ENST00000307548 TEFQ10587 303 aa16.48■□□□□ 0.23
SHANK2-AS3-201ENST00000307548 SEPT12Q8IYM1 358 aa16.48■□□□□ 0.23
SHANK2-AS3-201ENST00000307548 TSPYL6Q8N831 410 aa16.48■□□□□ 0.23
SHANK2-AS3-201ENST00000307548 TSPYL4Q9UJ04 414 aa16.48■□□□□ 0.23
SHANK2-AS3-201ENST00000307548 KDM3BQ7LBC6 1761 aa16.47■□□□□ 0.23
SHANK2-AS3-201ENST00000307548 SMC4Q9NTJ3 1288 aa16.46■□□□□ 0.23
SHANK2-AS3-201ENST00000307548 MIS18AQ9NYP9 233 aa16.46■□□□□ 0.23
SHANK2-AS3-201ENST00000307548 MS4A1P11836 297 aa16.46■□□□□ 0.23
SHANK2-AS3-201ENST00000307548 C20orf194Q5TEA3 1177 aa16.46■□□□□ 0.23
SHANK2-AS3-201ENST00000307548 NFATC2IPQ8NCF5 419 aa16.46■□□□□ 0.23
SHANK2-AS3-201ENST00000307548 EXOC6Q8TAG9 804 aa16.46■□□□□ 0.23
SHANK2-AS3-201ENST00000307548 BCL9O00512 1426 aa16.45■□□□□ 0.22
SHANK2-AS3-201ENST00000307548 A0A0G2JS52 829 aa16.45■□□□□ 0.22
SHANK2-AS3-201ENST00000307548 MYT1Q01538 1121 aa16.45■□□□□ 0.22
SHANK2-AS3-201ENST00000307548 RGS12O14924 1447 aa16.45■□□□□ 0.22
SHANK2-AS3-201ENST00000307548 DOT1LQ8TEK3 1739 aa16.45■□□□□ 0.22
SHANK2-AS3-201ENST00000307548 KIF16BQ96L93 1317 aa16.44■□□□□ 0.22
SHANK2-AS3-201ENST00000307548 IPO8O15397 1037 aaKnown RBP16.44■□□□□ 0.22
SHANK2-AS3-201ENST00000307548 ZKSCAN2Q63HK3 967 aa16.44■□□□□ 0.22
SHANK2-AS3-201ENST00000307548 ARHGAP45Q92619 1136 aa16.44■□□□□ 0.22
SHANK2-AS3-201ENST00000307548 PAPPAQ13219 1627 aa16.44■□□□□ 0.22
SHANK2-AS3-201ENST00000307548 RXRBP28702 533 aa16.43■□□□□ 0.22
SHANK2-AS3-201ENST00000307548 CABP4P57796 275 aa16.43■□□□□ 0.22
SHANK2-AS3-201ENST00000307548 MRPL50Q8N5N7 158 aaKnown RBP16.43■□□□□ 0.22
SHANK2-AS3-201ENST00000307548 CRBNQ96SW2 442 aa16.43■□□□□ 0.22
SHANK2-AS3-201ENST00000307548 ITGB4P16144 1822 aa16.43■□□□□ 0.22
SHANK2-AS3-201ENST00000307548 BRWD3Q6RI45 1802 aa16.43■□□□□ 0.22
SHANK2-AS3-201ENST00000307548 BTBD11A6QL63 1104 aa16.43■□□□□ 0.22
SHANK2-AS3-201ENST00000307548 BCL2L13Q9BXK5 485 aa16.43■□□□□ 0.22
SHANK2-AS3-201ENST00000307548 ELL2O00472 640 aaPredicted RBP16.42■□□□□ 0.22
SHANK2-AS3-201ENST00000307548 KCNQ3O43525 872 aa16.42■□□□□ 0.22
SHANK2-AS3-201ENST00000307548 CANXP27824 592 aaKnown RBP16.42■□□□□ 0.22
SHANK2-AS3-201ENST00000307548 AAMPQ13685 434 aa16.42■□□□□ 0.22
SHANK2-AS3-201ENST00000307548 FRAT1Q92837 279 aaPredicted RBP16.42■□□□□ 0.22
SHANK2-AS3-201ENST00000307548 HOXB7P09629 217 aa16.41■□□□□ 0.22
SHANK2-AS3-201ENST00000307548 KRT24Q2M2I5 525 aa16.41■□□□□ 0.22
SHANK2-AS3-201ENST00000307548 ATF7IPQ6VMQ6 1270 aa16.41■□□□□ 0.22
SHANK2-AS3-201ENST00000307548 CHMP4AQ9BY43 222 aa16.41■□□□□ 0.22
SHANK2-AS3-201ENST00000307548 HEG1Q9ULI3 1381 aa16.41■□□□□ 0.22
SHANK2-AS3-201ENST00000307548 EIF4A1P60842 406 aaKnown RBP16.4■□□□□ 0.22
SHANK2-AS3-201ENST00000307548 PIGBQ92521 554 aa16.4■□□□□ 0.22
SHANK2-AS3-201ENST00000307548 NOB1Q9ULX3 412 aaKnown RBP16.4■□□□□ 0.22
SHANK2-AS3-201ENST00000307548 PRIM1P49642 420 aaKnown RBP16.4■□□□□ 0.22
SHANK2-AS3-201ENST00000307548 ZNF790Q6PG37 636 aa16.4■□□□□ 0.22
SHANK2-AS3-201ENST00000307548 TMOD3Q9NYL9 352 aa16.4■□□□□ 0.22
SHANK2-AS3-201ENST00000307548 UBR2Q8IWV8 1755 aa16.39■□□□□ 0.21
SHANK2-AS3-201ENST00000307548 SLC39A6Q13433 755 aa16.39■□□□□ 0.21
SHANK2-AS3-201ENST00000307548 KRT27Q7Z3Y8 459 aa16.39■□□□□ 0.21
SHANK2-AS3-201ENST00000307548 DZIP1LQ8IYY4 767 aaKnown RBP16.39■□□□□ 0.21
SHANK2-AS3-201ENST00000307548 KCPQ6ZWJ8 1503 aa16.38■□□□□ 0.21
SHANK2-AS3-201ENST00000307548 TRIM27P14373 513 aa16.38■□□□□ 0.21
SHANK2-AS3-201ENST00000307548 FAM182BQ5T319 152 aa16.38■□□□□ 0.21
SHANK2-AS3-201ENST00000307548 NHSQ6T4R5 1651 aa16.37■□□□□ 0.21
SHANK2-AS3-201ENST00000307548 PANK1Q8TE04 598 aa16.37■□□□□ 0.21
SHANK2-AS3-201ENST00000307548 ACSBG1Q96GR2 724 aa16.37■□□□□ 0.21
SHANK2-AS3-201ENST00000307548 KCNQ2O43526 872 aa16.37■□□□□ 0.21
SHANK2-AS3-201ENST00000307548 RLBP1P12271 317 aa16.37■□□□□ 0.21
SHANK2-AS3-201ENST00000307548 CCDC30Q5VVM6 783 aa16.37■□□□□ 0.21
SHANK2-AS3-201ENST00000307548 CCDC136Q96JN2 1154 aa16.37■□□□□ 0.21
SHANK2-AS3-201ENST00000307548 ATG3Q9NT62 314 aa16.37■□□□□ 0.21
SHANK2-AS3-201ENST00000307548 SBF2Q86WG5 1849 aa16.36■□□□□ 0.21
SHANK2-AS3-201ENST00000307548 B4GALNT3Q6L9W6 998 aa16.36■□□□□ 0.21
SHANK2-AS3-201ENST00000307548 ZNF496Q96IT1 587 aaPredicted RBP16.36■□□□□ 0.21
SHANK2-AS3-201ENST00000307548 ASAP1Q9ULH1 1129 aa16.36■□□□□ 0.21
SHANK2-AS3-201ENST00000307548 EP400Q96L91 3159 aa16.36■□□□□ 0.21
SHANK2-AS3-201ENST00000307548 API5Q9BZZ5 524 aaKnown RBP16.35■□□□□ 0.21
SHANK2-AS3-201ENST00000307548 CACNA1FO60840 1977 aa16.34■□□□□ 0.21
SHANK2-AS3-201ENST00000307548 GIGYF1O75420 1035 aaPredicted RBP16.34■□□□□ 0.21
SHANK2-AS3-201ENST00000307548 MVPQ14764 893 aaKnown RBP16.34■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 21 ms