RNA–Protein interactions for RNA: ENST00000307367.2

CLCN5-201, Transcript of chloride voltage-gated channel 5, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CLCN5, Length 3,177 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN5-201ENST00000307367 SLIT2O94813 1529 aa9.31□□□□□ -0.92
CLCN5-201ENST00000307367 ELL2O00472 640 aaPredicted RBP9.31□□□□□ -0.92
CLCN5-201ENST00000307367 MS4A1P11836 297 aa9.31□□□□□ -0.92
CLCN5-201ENST00000307367 C20orf194Q5TEA3 1177 aa9.31□□□□□ -0.92
CLCN5-201ENST00000307367 EXOC6Q8TAG9 804 aa9.31□□□□□ -0.92
CLCN5-201ENST00000307367 CYP27B1O15528 508 aa9.3□□□□□ -0.92
CLCN5-201ENST00000307367 ZKSCAN2Q63HK3 967 aa9.3□□□□□ -0.92
CLCN5-201ENST00000307367 DCAF5Q96JK2 942 aa9.3□□□□□ -0.92
CLCN5-201ENST00000307367 KDM6AO15550 1401 aaPredicted RBP9.3□□□□□ -0.92
CLCN5-201ENST00000307367 IPO8O15397 1037 aaKnown RBP9.3□□□□□ -0.92
CLCN5-201ENST00000307367 MRC1P22897 1456 aa9.3□□□□□ -0.92
CLCN5-201ENST00000307367 BTBD11A6QL63 1104 aa9.3□□□□□ -0.92
CLCN5-201ENST00000307367 CRBNQ96SW2 442 aa9.3□□□□□ -0.92
CLCN5-201ENST00000307367 DISP2A7MBM2 1401 aa9.3□□□□□ -0.92
CLCN5-201ENST00000307367 MRPL50Q8N5N7 158 aaKnown RBP9.29□□□□□ -0.92
CLCN5-201ENST00000307367 USP35Q9P2H5 1018 aa9.29□□□□□ -0.92
CLCN5-201ENST00000307367 THRAP3Q9Y2W1 955 aaKnown RBP9.29□□□□□ -0.92
CLCN5-201ENST00000307367 KRT24Q2M2I5 525 aa9.29□□□□□ -0.92
CLCN5-201ENST00000307367 ATF7IPQ6VMQ6 1270 aa9.28□□□□□ -0.92
CLCN5-201ENST00000307367 ARHGAP45Q92619 1136 aa9.28□□□□□ -0.92
CLCN5-201ENST00000307367 CDCA7Q9BWT1 371 aaPredicted RBP9.28□□□□□ -0.92
CLCN5-201ENST00000307367 CHMP4AQ9BY43 222 aa9.28□□□□□ -0.92
CLCN5-201ENST00000307367 SLC52A2Q9HAB3 445 aa9.28□□□□□ -0.92
CLCN5-201ENST00000307367 NOB1Q9ULX3 412 aaKnown RBP9.28□□□□□ -0.92
CLCN5-201ENST00000307367 HOXB7P09629 217 aa9.28□□□□□ -0.92
CLCN5-201ENST00000307367 NKX1-1Q15270 411 aaPredicted RBP9.28□□□□□ -0.92
CLCN5-201ENST00000307367 EIF4A1P60842 406 aaKnown RBP9.28□□□□□ -0.92
CLCN5-201ENST00000307367 DZIP1LQ8IYY4 767 aaKnown RBP9.28□□□□□ -0.92
CLCN5-201ENST00000307367 SPATA31A1Q5TZJ5 1347 aa9.27□□□□□ -0.92
CLCN5-201ENST00000307367 TNKS1BP1Q9C0C2 1729 aaKnown RBP9.27□□□□□ -0.93
CLCN5-201ENST00000307367 TRIM27P14373 513 aa9.27□□□□□ -0.93
CLCN5-201ENST00000307367 HSPA1LP34931 641 aa9.27□□□□□ -0.93
CLCN5-201ENST00000307367 FTSJ3Q8IY81 847 aaKnown RBP9.27□□□□□ -0.93
CLCN5-201ENST00000307367 AAMPQ13685 434 aa9.27□□□□□ -0.93
CLCN5-201ENST00000307367 PANK1Q8TE04 598 aa9.27□□□□□ -0.93
CLCN5-201ENST00000307367 CCDC136Q96JN2 1154 aa9.27□□□□□ -0.93
CLCN5-201ENST00000307367 UNC5CLQ8IV45 518 aa9.26□□□□□ -0.93
CLCN5-201ENST00000307367 LRP6O75581 1613 aa9.26□□□□□ -0.93
CLCN5-201ENST00000307367 SPATA31A5Q5VU36 1347 aa9.26□□□□□ -0.93
CLCN5-201ENST00000307367 SPATA31A7Q8IWB4 1347 aa9.26□□□□□ -0.93
CLCN5-201ENST00000307367 ERVV-2B6SEH9 535 aa9.26□□□□□ -0.93
CLCN5-201ENST00000307367 CCDC30Q5VVM6 783 aa9.26□□□□□ -0.93
CLCN5-201ENST00000307367 NFATC2IPQ8NCF5 419 aa9.26□□□□□ -0.93
CLCN5-201ENST00000307367 NGLY1Q96IV0 654 aa9.26□□□□□ -0.93
CLCN5-201ENST00000307367 C8orf37Q96NL8 207 aa9.26□□□□□ -0.93
CLCN5-201ENST00000307367 MSH5O43196 834 aa9.26□□□□□ -0.93
CLCN5-201ENST00000307367 RLBP1P12271 317 aa9.26□□□□□ -0.93
CLCN5-201ENST00000307367 CABP4P57796 275 aa9.26□□□□□ -0.93
CLCN5-201ENST00000307367 B4GALNT3Q6L9W6 998 aa9.26□□□□□ -0.93
CLCN5-201ENST00000307367 FNBP4Q8N3X1 1017 aaPredicted RBP9.26□□□□□ -0.93
CLCN5-201ENST00000307367 DDX54Q8TDD1 881 aaKnown RBP9.26□□□□□ -0.93
CLCN5-201ENST00000307367 CLUAP1Q96AJ1 413 aa9.26□□□□□ -0.93
CLCN5-201ENST00000307367 STK31Q9BXU1 1019 aa9.26□□□□□ -0.93
CLCN5-201ENST00000307367 COG6Q9Y2V7 657 aa9.26□□□□□ -0.93
CLCN5-201ENST00000307367 TNS2Q63HR2 1409 aa9.26□□□□□ -0.93
CLCN5-201ENST00000307367 HEG1Q9ULI3 1381 aa9.25□□□□□ -0.93
CLCN5-201ENST00000307367 ZNF790Q6PG37 636 aa9.25□□□□□ -0.93
CLCN5-201ENST00000307367 BCL9LQ86UU0 1499 aa9.25□□□□□ -0.93
CLCN5-201ENST00000307367 EXOC5O00471 708 aa9.25□□□□□ -0.93
CLCN5-201ENST00000307367 TCERG1O14776 1098 aaKnown RBP9.25□□□□□ -0.93
CLCN5-201ENST00000307367 MVPQ14764 893 aaKnown RBP9.25□□□□□ -0.93
CLCN5-201ENST00000307367 BARGINQ6ZT62 677 aa9.25□□□□□ -0.93
CLCN5-201ENST00000307367 API5Q9BZZ5 524 aaKnown RBP9.25□□□□□ -0.93
CLCN5-201ENST00000307367 TNNQ9UQP3 1299 aa9.25□□□□□ -0.93
CLCN5-201ENST00000307367 PTPRCP08575 1304 aa9.25□□□□□ -0.93
CLCN5-201ENST00000307367 TOGARAM1Q9Y4F4 1720 aa9.25□□□□□ -0.93
CLCN5-201ENST00000307367 KCNQ3O43525 872 aa9.24□□□□□ -0.93
CLCN5-201ENST00000307367 SLC4A2P04920 1241 aa9.24□□□□□ -0.93
CLCN5-201ENST00000307367 VPS72Q15906 364 aa9.24□□□□□ -0.93
CLCN5-201ENST00000307367 HDGFL1Q5TGJ6 251 aa9.24□□□□□ -0.93
CLCN5-201ENST00000307367 PAPPAQ13219 1627 aa9.24□□□□□ -0.93
CLCN5-201ENST00000307367 UBR2Q8IWV8 1755 aa9.24□□□□□ -0.93
CLCN5-201ENST00000307367 TTC5Q8N0Z6 440 aa9.24□□□□□ -0.93
CLCN5-201ENST00000307367 DDX19BQ9UMR2 479 aa9.24□□□□□ -0.93
CLCN5-201ENST00000307367 CCDC9Q9Y3X0 531 aaKnown RBP9.24□□□□□ -0.93
CLCN5-201ENST00000307367 RBM19Q9Y4C8 960 aaKnown RBP9.24□□□□□ -0.93
CLCN5-201ENST00000307367 ITGB4P16144 1822 aa9.24□□□□□ -0.93
CLCN5-201ENST00000307367 GIGYF1O75420 1035 aaPredicted RBP9.23□□□□□ -0.93
CLCN5-201ENST00000307367 ABCC4O15439 1325 aa9.23□□□□□ -0.93
CLCN5-201ENST00000307367 DDB1Q16531 1140 aa9.23□□□□□ -0.93
CLCN5-201ENST00000307367 SLC39A6Q13433 755 aa9.22□□□□□ -0.93
CLCN5-201ENST00000307367 MEX3CQ5U5Q3 659 aaKnown RBP9.22□□□□□ -0.93
CLCN5-201ENST00000307367 TMEM57Q8N5G2 664 aa9.22□□□□□ -0.93
CLCN5-201ENST00000307367 PKNOX2Q96KN3 472 aa9.22□□□□□ -0.93
CLCN5-201ENST00000307367 ITPRIPQ8IWB1 547 aa9.22□□□□□ -0.93
CLCN5-201ENST00000307367 CHMP4BQ9H444 224 aaKnown RBP9.22□□□□□ -0.93
CLCN5-201ENST00000307367 USP21Q9UK80 565 aa9.22□□□□□ -0.93
CLCN5-201ENST00000307367 C5P01031 1676 aa9.22□□□□□ -0.93
CLCN5-201ENST00000307367 KAT6BQ8WYB5 2073 aa9.22□□□□□ -0.93
CLCN5-201ENST00000307367 LAMB4A4D0S4 1761 aa9.22□□□□□ -0.93
CLCN5-201ENST00000307367 RGS12O14924 1447 aa9.22□□□□□ -0.93
CLCN5-201ENST00000307367 DEKP35659 375 aaKnown RBP9.22□□□□□ -0.93
CLCN5-201ENST00000307367 FMNL2Q96PY5 1086 aa9.22□□□□□ -0.93
CLCN5-201ENST00000307367 EIF2S2P20042 333 aaKnown RBP9.21□□□□□ -0.93
CLCN5-201ENST00000307367 FLIIQ13045 1269 aa9.21□□□□□ -0.94
CLCN5-201ENST00000307367 NECTIN2Q92692 538 aa9.21□□□□□ -0.94
CLCN5-201ENST00000307367 TMOD3Q9NYL9 352 aa9.21□□□□□ -0.94
CLCN5-201ENST00000307367 N4BP2Q86UW6 1770 aaPredicted RBP9.2□□□□□ -0.94
CLCN5-201ENST00000307367 SNRPA1P09661 255 aaKnown RBP9.2□□□□□ -0.94
CLCN5-201ENST00000307367 ZNF496Q96IT1 587 aaPredicted RBP9.2□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 20.7 ms