RNA–Protein interactions for RNA: ENST00000305699.15

FANCA-201, Transcript of FA complementation group A, humanhuman

TSL 2

Gene FANCA, Length 1,430 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FANCA-201ENST00000305699 KDM6AO15550 1401 aaPredicted RBP21.12■□□□□ 0.97
FANCA-201ENST00000305699 NPC1L1Q9UHC9 1359 aa21.12■□□□□ 0.97
FANCA-201ENST00000305699 DIAPH1O60610 1272 aaKnown RBP21.11■□□□□ 0.97
FANCA-201ENST00000305699 PHF14O94880 888 aa21.11■□□□□ 0.97
FANCA-201ENST00000305699 HMOX1P09601 288 aa21.11■□□□□ 0.97
FANCA-201ENST00000305699 YY1P25490 414 aa21.11■□□□□ 0.97
FANCA-201ENST00000305699 LINC00116Q8NCU8 138 aa21.11■□□□□ 0.97
FANCA-201ENST00000305699 MAP3K5Q99683 1374 aa21.11■□□□□ 0.97
FANCA-201ENST00000305699 RBM42Q9BTD8 480 aaKnown RBP21.1■□□□□ 0.97
FANCA-201ENST00000305699 ITPK1Q13572 414 aa21.09■□□□□ 0.97
FANCA-201ENST00000305699 UBR3Q6ZT12 1888 aa21.08■□□□□ 0.97
FANCA-201ENST00000305699 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP21.08■□□□□ 0.97
FANCA-201ENST00000305699 GNPATO15228 680 aa21.07■□□□□ 0.96
FANCA-201ENST00000305699 SMIM5Q71RC9 77 aa21.07■□□□□ 0.96
FANCA-201ENST00000305699 AMIGO3Q86WK7 504 aa21.07■□□□□ 0.96
FANCA-201ENST00000305699 SSFA2P28290 1259 aa21.05■□□□□ 0.96
FANCA-201ENST00000305699 AKAP4Q5JQC9 854 aa21.05■□□□□ 0.96
FANCA-201ENST00000305699 NFATC2IPQ8NCF5 419 aa21.05■□□□□ 0.96
FANCA-201ENST00000305699 U2SURPO15042 1029 aaKnown RBP21.04■□□□□ 0.96
FANCA-201ENST00000305699 UTRNP46939 3433 aa21.04■□□□□ 0.96
FANCA-201ENST00000305699 SCN11AQ9UI33 1791 aa21.04■□□□□ 0.96
FANCA-201ENST00000305699 GPR162Q16538 588 aa21.04■□□□□ 0.96
FANCA-201ENST00000305699 PELP1Q8IZL8 1130 aaKnown RBP21.04■□□□□ 0.96
FANCA-201ENST00000305699 PTCD1O75127 700 aaKnown RBP21.03■□□□□ 0.96
FANCA-201ENST00000305699 NLGN2Q8NFZ4 835 aa21.03■□□□□ 0.96
FANCA-201ENST00000305699 SLC4A9Q96Q91 983 aa21.03■□□□□ 0.96
FANCA-201ENST00000305699 COL3A1P02461 1466 aaPredicted RBP21.02■□□□□ 0.96
FANCA-201ENST00000305699 ZNF831Q5JPB2 1677 aa21.01■□□□□ 0.95
FANCA-201ENST00000305699 MTHFSDQ2M296 383 aaKnown RBP21.01■□□□□ 0.95
FANCA-201ENST00000305699 CFAP53Q96M91 514 aa21.01■□□□□ 0.95
FANCA-201ENST00000305699 LGR6Q9HBX8 967 aa21■□□□□ 0.95
FANCA-201ENST00000305699 RTCBQ9Y3I0 505 aaKnown RBP21■□□□□ 0.95
FANCA-201ENST00000305699 COL5A3P25940 1745 aaPredicted RBP20.98■□□□□ 0.95
FANCA-201ENST00000305699 RNMTO43148 476 aaKnown RBP20.98■□□□□ 0.95
FANCA-201ENST00000305699 TRAPPC3LQ5T215 181 aa20.98■□□□□ 0.95
FANCA-201ENST00000305699 SLC52A2Q9HAB3 445 aa20.98■□□□□ 0.95
FANCA-201ENST00000305699 VIRMAQ69YN4 1812 aaKnown RBP20.98■□□□□ 0.95
FANCA-201ENST00000305699 GOLGB1Q14789 3259 aaKnown RBP20.98■□□□□ 0.95
FANCA-201ENST00000305699 CNTNAP4Q9C0A0 1308 aa20.97■□□□□ 0.95
FANCA-201ENST00000305699 RC3H1Q5TC82 1133 aaKnown RBP20.97■□□□□ 0.95
FANCA-201ENST00000305699 CD2APQ9Y5K6 639 aa20.95■□□□□ 0.95
FANCA-201ENST00000305699 CHD4Q14839 1912 aa20.95■□□□□ 0.94
FANCA-201ENST00000305699 PPP2R1AP30153 589 aa20.95■□□□□ 0.94
FANCA-201ENST00000305699 RPS6KA4O75676 772 aa20.94■□□□□ 0.94
FANCA-201ENST00000305699 ADRA2BP18089 450 aa20.94■□□□□ 0.94
FANCA-201ENST00000305699 NUDCQ9Y266 331 aa20.94■□□□□ 0.94
FANCA-201ENST00000305699 MRC1P22897 1456 aa20.94■□□□□ 0.94
FANCA-201ENST00000305699 TJP1Q07157 1748 aa20.93■□□□□ 0.94
FANCA-201ENST00000305699 RFC4P35249 363 aa20.93■□□□□ 0.94
FANCA-201ENST00000305699 CRKLP46109 303 aaKnown RBP20.93■□□□□ 0.94
FANCA-201ENST00000305699 SLC39A6Q13433 755 aa20.93■□□□□ 0.94
FANCA-201ENST00000305699 GAS2L2Q8NHY3 880 aa20.93■□□□□ 0.94
FANCA-201ENST00000305699 ARHGEF1Q92888 912 aaKnown RBP20.93■□□□□ 0.94
FANCA-201ENST00000305699 MYH14Q7Z406 1995 aaKnown RBP20.93■□□□□ 0.94
FANCA-201ENST00000305699 GNAT3A8MTJ3 354 aa20.91■□□□□ 0.94
FANCA-201ENST00000305699 MMP10P09238 476 aa20.91■□□□□ 0.94
FANCA-201ENST00000305699 PRKAR2BP31323 418 aa20.91■□□□□ 0.94
FANCA-201ENST00000305699 ADAMTS7Q9UKP4 1686 aa20.91■□□□□ 0.94
FANCA-201ENST00000305699 DNAJC10Q8IXB1 793 aa20.9■□□□□ 0.94
FANCA-201ENST00000305699 NLGN1Q8N2Q7 840 aa20.9■□□□□ 0.94
FANCA-201ENST00000305699 CICQ96RK0 1608 aaPredicted RBP20.89■□□□□ 0.94
FANCA-201ENST00000305699 U2AF1L5P0DN76 240 aaPredicted RBP20.89■□□□□ 0.94
FANCA-201ENST00000305699 YBX3P16989 372 aaKnown RBP eCLIP20.89■□□□□ 0.94
FANCA-201ENST00000305699 U2AF1Q01081 240 aaKnown RBP eCLIP20.89■□□□□ 0.94
FANCA-201ENST00000305699 C4AP0C0L4 1744 aa20.88■□□□□ 0.93
FANCA-201ENST00000305699 GRIN3BO60391 1043 aa20.88■□□□□ 0.93
FANCA-201ENST00000305699 TEFQ10587 303 aa20.88■□□□□ 0.93
FANCA-201ENST00000305699 RSPH6AQ9H0K4 717 aa20.88■□□□□ 0.93
FANCA-201ENST00000305699 GYS1P13807 737 aa20.87■□□□□ 0.93
FANCA-201ENST00000305699 TTC5Q8N0Z6 440 aa20.87■□□□□ 0.93
FANCA-201ENST00000305699 INTS5Q6P9B9 1019 aaKnown RBP20.87■□□□□ 0.93
FANCA-201ENST00000305699 PHACTR3Q96KR7 559 aa20.87■□□□□ 0.93
FANCA-201ENST00000305699 CCDC87Q9NVE4 849 aa20.87■□□□□ 0.93
FANCA-201ENST00000305699 KCPQ6ZWJ8 1503 aa20.86■□□□□ 0.93
FANCA-201ENST00000305699 ZNF784Q8NCA9 323 aaPredicted RBP20.86■□□□□ 0.93
FANCA-201ENST00000305699 IL17REQ8NFR9 667 aa20.86■□□□□ 0.93
FANCA-201ENST00000305699 WWC3Q9ULE0 1092 aa20.86■□□□□ 0.93
FANCA-201ENST00000305699 SRP68Q9UHB9 627 aaKnown RBP20.85■□□□□ 0.93
FANCA-201ENST00000305699 CYP19A1P11511 503 aaPredicted RBP20.84■□□□□ 0.93
FANCA-201ENST00000305699 PARP3Q9Y6F1 533 aa20.84■□□□□ 0.93
FANCA-201ENST00000305699 UBR2Q8IWV8 1755 aa20.83■□□□□ 0.93
FANCA-201ENST00000305699 VSIG10Q8N0Z9 540 aa20.83■□□□□ 0.93
FANCA-201ENST00000305699 USP42Q9H9J4 1324 aaKnown RBP20.83■□□□□ 0.92
FANCA-201ENST00000305699 FCHSD2O94868 740 aa20.82■□□□□ 0.92
FANCA-201ENST00000305699 ZPR1O75312 459 aa20.81■□□□□ 0.92
FANCA-201ENST00000305699 SOS1Q07889 1333 aaPredicted RBP20.81■□□□□ 0.92
FANCA-201ENST00000305699 SIPA1L3O60292 1781 aaPredicted RBP20.8■□□□□ 0.92
FANCA-201ENST00000305699 FKBP8Q14318 412 aa20.8■□□□□ 0.92
FANCA-201ENST00000305699 ZNF790Q6PG37 636 aa20.8■□□□□ 0.92
FANCA-201ENST00000305699 RTF1Q92541 710 aaKnown RBP20.8■□□□□ 0.92
FANCA-201ENST00000305699 ZBTB1Q9Y2K1 713 aa20.8■□□□□ 0.92
FANCA-201ENST00000305699 ZNF496Q96IT1 587 aaPredicted RBP20.79■□□□□ 0.92
FANCA-201ENST00000305699 CEMIPQ8WUJ3 1361 aa20.79■□□□□ 0.92
FANCA-201ENST00000305699 BTBD11A6QL63 1104 aa20.78■□□□□ 0.92
FANCA-201ENST00000305699 STARD3NLO95772 234 aa20.78■□□□□ 0.92
FANCA-201ENST00000305699 CANXP27824 592 aaKnown RBP20.78■□□□□ 0.92
FANCA-201ENST00000305699 USPL1Q5W0Q7 1092 aa20.78■□□□□ 0.92
FANCA-201ENST00000305699 KIF13BQ9NQT8 1826 aa20.78■□□□□ 0.92
FANCA-201ENST00000305699 COL15A1P39059 1388 aa20.78■□□□□ 0.92
FANCA-201ENST00000305699 C10orf71Q711Q0 1435 aa20.78■□□□□ 0.92
Retrieved 100 of 20,778 RNA–protein pairs in 46.1 ms