RNA–Protein interactions for RNA: ENST00000305364.8

TRIM35-201, Transcript of tripartite motif containing 35, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRIM35, Length 4,229 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM35-201ENST00000305364 IFFO2Q5TF58 517 aa15.55■□□□□ 0.08
TRIM35-201ENST00000305364 LARP1BQ659C4 914 aaKnown RBP15.55■□□□□ 0.08
TRIM35-201ENST00000305364 SRCIN1Q9C0H9 1055 aa15.55■□□□□ 0.08
TRIM35-201ENST00000305364 CASTP20810 708 aaKnown RBP15.55■□□□□ 0.08
TRIM35-201ENST00000305364 VIRMAQ69YN4 1812 aaKnown RBP15.54■□□□□ 0.08
TRIM35-201ENST00000305364 CNTROBQ8N137 903 aa15.54■□□□□ 0.08
TRIM35-201ENST00000305364 AK9Q5TCS8 1911 aa15.54■□□□□ 0.08
TRIM35-201ENST00000305364 CCDC186Q7Z3E2 898 aa15.54■□□□□ 0.08
TRIM35-201ENST00000305364 PRDM4Q9UKN5 801 aa15.54■□□□□ 0.08
TRIM35-201ENST00000305364 SBNO2Q9Y2G9 1366 aa15.54■□□□□ 0.08
TRIM35-201ENST00000305364 ABCC4O15439 1325 aa15.54■□□□□ 0.08
TRIM35-201ENST00000305364 CYP2E1P05181 493 aaPredicted RBP15.54■□□□□ 0.08
TRIM35-201ENST00000305364 POLKQ9UBT6 870 aa15.54■□□□□ 0.08
TRIM35-201ENST00000305364 MYO5CQ9NQX4 1742 aa15.54■□□□□ 0.08
TRIM35-201ENST00000305364 PTGS1P23219 599 aa15.53■□□□□ 0.08
TRIM35-201ENST00000305364 GPATCH3Q96I76 525 aa15.53■□□□□ 0.08
TRIM35-201ENST00000305364 LIMCH1Q9UPQ0 1083 aa15.53■□□□□ 0.08
TRIM35-201ENST00000305364 JAKMIP1Q96N16 626 aaKnown RBP15.53■□□□□ 0.08
TRIM35-201ENST00000305364 MADDQ8WXG6 1647 aa15.53■□□□□ 0.08
TRIM35-201ENST00000305364 TAF3Q5VWG9 929 aa15.53■□□□□ 0.08
TRIM35-201ENST00000305364 IQGAP3Q86VI3 1631 aa15.53■□□□□ 0.08
TRIM35-201ENST00000305364 ABCA8O94911 1581 aa15.52■□□□□ 0.08
TRIM35-201ENST00000305364 ANAPC15P60006 121 aa15.52■□□□□ 0.08
TRIM35-201ENST00000305364 DNM1Q05193 864 aaKnown RBP15.52■□□□□ 0.08
TRIM35-201ENST00000305364 FILIP1Q7Z7B0 1213 aa15.52■□□□□ 0.08
TRIM35-201ENST00000305364 NME9Q86XW9 330 aa15.52■□□□□ 0.08
TRIM35-201ENST00000305364 PALD1Q9ULE6 856 aa15.52■□□□□ 0.08
TRIM35-201ENST00000305364 CD109Q6YHK3 1445 aa15.52■□□□□ 0.08
TRIM35-201ENST00000305364 UTP14CQ5TAP6 766 aaKnown RBP15.52■□□□□ 0.07
TRIM35-201ENST00000305364 AEBP1Q8IUX7 1158 aa15.52■□□□□ 0.07
TRIM35-201ENST00000305364 CYP46A1Q9Y6A2 500 aa15.52■□□□□ 0.07
TRIM35-201ENST00000305364 EIF2S2P20042 333 aaKnown RBP15.51■□□□□ 0.07
TRIM35-201ENST00000305364 FOSBP53539 338 aa15.51■□□□□ 0.07
TRIM35-201ENST00000305364 PDRG1Q9NUG6 133 aa15.51■□□□□ 0.07
TRIM35-201ENST00000305364 GJB2P29033 226 aa15.51■□□□□ 0.07
TRIM35-201ENST00000305364 CEBPZQ03701 1054 aaKnown RBP15.51■□□□□ 0.07
TRIM35-201ENST00000305364 SPG7Q9UQ90 795 aa15.51■□□□□ 0.07
TRIM35-201ENST00000305364 HOMER1Q86YM7 354 aa15.51■□□□□ 0.07
TRIM35-201ENST00000305364 UNC13BO14795 1591 aa15.5■□□□□ 0.07
TRIM35-201ENST00000305364 CHMLP26374 656 aa15.5■□□□□ 0.07
TRIM35-201ENST00000305364 F13A1P00488 732 aa15.5■□□□□ 0.07
TRIM35-201ENST00000305364 SYT1P21579 422 aa15.5■□□□□ 0.07
TRIM35-201ENST00000305364 SPATA32Q96LK8 384 aa15.5■□□□□ 0.07
TRIM35-201ENST00000305364 UGGT1Q9NYU2 1555 aa15.5■□□□□ 0.07
TRIM35-201ENST00000305364 STK3Q13188 491 aa15.49■□□□□ 0.07
TRIM35-201ENST00000305364 ATP2B3Q16720 1220 aa15.49■□□□□ 0.07
TRIM35-201ENST00000305364 TFIP11Q9UBB9 837 aaKnown RBP15.49■□□□□ 0.07
TRIM35-201ENST00000305364 CLIP2Q9UDT6 1046 aa15.49■□□□□ 0.07
TRIM35-201ENST00000305364 NOL12Q9UGY1 213 aaKnown RBP eCLIP15.49■□□□□ 0.07
TRIM35-201ENST00000305364 V9GYY5 206 aaPredicted RBP15.49■□□□□ 0.07
TRIM35-201ENST00000305364 PTPRCP08575 1304 aa15.49■□□□□ 0.07
TRIM35-201ENST00000305364 MSH6P52701 1360 aa15.49■□□□□ 0.07
TRIM35-201ENST00000305364 PDCP20941 246 aa15.49■□□□□ 0.07
TRIM35-201ENST00000305364 PUS7Q96PZ0 661 aaKnown RBP15.49■□□□□ 0.07
TRIM35-201ENST00000305364 TRPM2O94759 1503 aa15.49■□□□□ 0.07
TRIM35-201ENST00000305364 IFIT2P09913 472 aaKnown RBP15.49■□□□□ 0.07
TRIM35-201ENST00000305364 WAPLQ7Z5K2 1190 aa15.48■□□□□ 0.07
TRIM35-201ENST00000305364 FAM200AQ8TCP9 573 aa15.48■□□□□ 0.07
TRIM35-201ENST00000305364 TRERF1Q96PN7 1200 aa15.48■□□□□ 0.07
TRIM35-201ENST00000305364 TRMT1Q9NXH9 659 aaKnown RBP15.48■□□□□ 0.07
TRIM35-201ENST00000305364 PYCARDQ9ULZ3 195 aa15.48■□□□□ 0.07
TRIM35-201ENST00000305364 IQSEC2Q5JU85 1478 aa15.48■□□□□ 0.07
TRIM35-201ENST00000305364 AMPHP49418 695 aa15.48■□□□□ 0.07
TRIM35-201ENST00000305364 PTPN14Q15678 1187 aa15.48■□□□□ 0.07
TRIM35-201ENST00000305364 GORABQ5T7V8 394 aa15.48■□□□□ 0.07
TRIM35-201ENST00000305364 LUZP1Q86V48 1076 aa15.48■□□□□ 0.07
TRIM35-201ENST00000305364 FEZ1Q99689 392 aa15.48■□□□□ 0.07
TRIM35-201ENST00000305364 OGFRQ9NZT2 677 aa15.48■□□□□ 0.07
TRIM35-201ENST00000305364 LRRFIP2Q9Y608 721 aaKnown RBP15.48■□□□□ 0.07
TRIM35-201ENST00000305364 PRPF40BQ6NWY9 871 aaKnown RBP15.48■□□□□ 0.07
TRIM35-201ENST00000305364 BRPF1P55201 1214 aaPredicted RBP15.47■□□□□ 0.07
TRIM35-201ENST00000305364 CCDC30Q5VVM6 783 aa15.47■□□□□ 0.07
TRIM35-201ENST00000305364 LTV1Q96GA3 475 aaPredicted RBP15.47■□□□□ 0.07
TRIM35-201ENST00000305364 AK2P54819 239 aa15.47■□□□□ 0.07
TRIM35-201ENST00000305364 PREX2Q70Z35 1606 aa15.47■□□□□ 0.07
TRIM35-201ENST00000305364 CPA1P15085 419 aa15.47■□□□□ 0.07
TRIM35-201ENST00000305364 ZNF165P49910 485 aa15.46■□□□□ 0.07
TRIM35-201ENST00000305364 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP15.46■□□□□ 0.07
TRIM35-201ENST00000305364 SRGAP3O43295 1099 aa15.46■□□□□ 0.07
TRIM35-201ENST00000305364 ZSCAN20P17040 1043 aaPredicted RBP15.46■□□□□ 0.07
TRIM35-201ENST00000305364 ANO6Q4KMQ2 910 aa15.46■□□□□ 0.07
TRIM35-201ENST00000305364 NECAB1Q8N987 351 aa15.46■□□□□ 0.07
TRIM35-201ENST00000305364 ADGRL1O94910 1474 aa15.46■□□□□ 0.07
TRIM35-201ENST00000305364 GNL2Q13823 731 aaKnown RBP15.46■□□□□ 0.06
TRIM35-201ENST00000305364 IDI1Q13907 227 aa15.46■□□□□ 0.06
TRIM35-201ENST00000305364 TEX35Q5T0J7 233 aa15.46■□□□□ 0.06
TRIM35-201ENST00000305364 ZSCAN31Q96LW9 406 aaPredicted RBP15.46■□□□□ 0.06
TRIM35-201ENST00000305364 ZRANB1Q9UGI0 708 aa15.46■□□□□ 0.06
TRIM35-201ENST00000305364 SF3A1Q15459 793 aaKnown RBP15.45■□□□□ 0.06
TRIM35-201ENST00000305364 RNF20Q5VTR2 975 aa15.45■□□□□ 0.06
TRIM35-201ENST00000305364 CEP135Q66GS9 1140 aa15.45■□□□□ 0.06
TRIM35-201ENST00000305364 CCDC73Q6ZRK6 1079 aa15.45■□□□□ 0.06
TRIM35-201ENST00000305364 CLASRPQ8N2M8 674 aaKnown RBP15.45■□□□□ 0.06
TRIM35-201ENST00000305364 TPM4P67936 248 aa15.45■□□□□ 0.06
TRIM35-201ENST00000305364 NGDNQ8NEJ9 315 aaKnown RBP15.45■□□□□ 0.06
TRIM35-201ENST00000305364 PAXBP1Q9Y5B6 917 aa15.45■□□□□ 0.06
TRIM35-201ENST00000305364 TYRO3Q06418 890 aa15.44■□□□□ 0.06
TRIM35-201ENST00000305364 FMNL2Q96PY5 1086 aa15.44■□□□□ 0.06
TRIM35-201ENST00000305364 DACT1Q9NYF0 836 aa15.44■□□□□ 0.06
TRIM35-201ENST00000305364 KRT222Q8N1A0 295 aa15.44■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 16.1 ms