RNA–Protein interactions for RNA: ENST00000304623.12

CTNND2-201, Transcript of catenin delta 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CTNND2, Length 5,481 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNND2-201ENST00000304623 NKTRP30414 1462 aaKnown RBP23.18■■□□□ 1.3
CTNND2-201ENST00000304623 AQRO60306 1485 aaKnown RBP eCLIP23.18■■□□□ 1.3
CTNND2-201ENST00000304623 URI1O94763 535 aaPredicted RBP23.17■■□□□ 1.3
CTNND2-201ENST00000304623 RAI14Q9P0K7 980 aa23.17■■□□□ 1.3
CTNND2-201ENST00000304623 HMGB1P09429 215 aaKnown RBP23.17■■□□□ 1.3
CTNND2-201ENST00000304623 PROSER2Q86WR7 435 aaPredicted RBP23.17■■□□□ 1.3
CTNND2-201ENST00000304623 TNPO1Q92973 898 aaKnown RBP23.17■■□□□ 1.3
CTNND2-201ENST00000304623 TBC1D2Q9BYX2 928 aa23.17■■□□□ 1.3
CTNND2-201ENST00000304623 GNAT3A8MTJ3 354 aa23.16■■□□□ 1.3
CTNND2-201ENST00000304623 KIF4BQ2VIQ3 1234 aa23.16■■□□□ 1.3
CTNND2-201ENST00000304623 SSFA2P28290 1259 aa23.16■■□□□ 1.3
CTNND2-201ENST00000304623 STRN4Q9NRL3 753 aa23.16■■□□□ 1.3
CTNND2-201ENST00000304623 DDX19AQ9NUU7 478 aaKnown RBP23.16■■□□□ 1.3
CTNND2-201ENST00000304623 RRS1Q15050 365 aaKnown RBP23.15■■□□□ 1.3
CTNND2-201ENST00000304623 FKBP15Q5T1M5 1219 aa23.15■■□□□ 1.3
CTNND2-201ENST00000304623 DUSP27Q5VZP5 1158 aa23.15■■□□□ 1.3
CTNND2-201ENST00000304623 PHAXQ9H814 394 aaKnown RBP23.15■■□□□ 1.3
CTNND2-201ENST00000304623 LRP2BPQ9P2M1 347 aa23.15■■□□□ 1.3
CTNND2-201ENST00000304623 SSH1Q8WYL5 1049 aa23.15■■□□□ 1.3
CTNND2-201ENST00000304623 IDH1O75874 414 aaKnown RBP23.15■■□□□ 1.3
CTNND2-201ENST00000304623 CBX1P83916 185 aa23.15■■□□□ 1.3
CTNND2-201ENST00000304623 LIMCH1Q9UPQ0 1083 aa23.15■■□□□ 1.3
CTNND2-201ENST00000304623 GRIN2BQ13224 1484 aa23.15■■□□□ 1.3
CTNND2-201ENST00000304623 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP23.15■■□□□ 1.3
CTNND2-201ENST00000304623 DESP17661 470 aa23.15■■□□□ 1.3
CTNND2-201ENST00000304623 XPCQ01831 940 aaPredicted RBP23.15■■□□□ 1.3
CTNND2-201ENST00000304623 AKAP2Q9Y2D5 859 aa23.15■■□□□ 1.3
CTNND2-201ENST00000304623 CCDC196A0A1B0GTZ2 297 aa23.14■■□□□ 1.3
CTNND2-201ENST00000304623 PPP1R12BO60237 982 aaPredicted RBP23.14■■□□□ 1.3
CTNND2-201ENST00000304623 TNNT1P13805 278 aa23.14■■□□□ 1.3
CTNND2-201ENST00000304623 CETN2P41208 172 aa23.14■■□□□ 1.3
CTNND2-201ENST00000304623 DAPK1P53355 1430 aa23.14■■□□□ 1.29
CTNND2-201ENST00000304623 GSDMDP57764 484 aa23.14■■□□□ 1.29
CTNND2-201ENST00000304623 TOM1L2Q6ZVM7 507 aa23.14■■□□□ 1.29
CTNND2-201ENST00000304623 CALCOCO1Q9P1Z2 691 aa23.14■■□□□ 1.29
CTNND2-201ENST00000304623 C8orf76Q96K31 380 aa23.13■■□□□ 1.29
CTNND2-201ENST00000304623 SLC26A8Q96RN1 970 aa23.13■■□□□ 1.29
CTNND2-201ENST00000304623 TROQ12816 1431 aaPredicted RBP23.13■■□□□ 1.29
CTNND2-201ENST00000304623 SMARCA5O60264 1052 aaPredicted RBP23.12■■□□□ 1.29
CTNND2-201ENST00000304623 THEMISQ8N1K5 641 aaPredicted RBP23.12■■□□□ 1.29
CTNND2-201ENST00000304623 DDX54Q8TDD1 881 aaKnown RBP23.12■■□□□ 1.29
CTNND2-201ENST00000304623 USP25Q9UHP3 1055 aa23.12■■□□□ 1.29
CTNND2-201ENST00000304623 POTEB2H3BUK9 544 aa23.12■■□□□ 1.29
CTNND2-201ENST00000304623 POTEJP0CG39 1038 aa23.11■■□□□ 1.29
CTNND2-201ENST00000304623 ZNF76P36508 570 aa23.11■■□□□ 1.29
CTNND2-201ENST00000304623 C20orf194Q5TEA3 1177 aa23.11■■□□□ 1.29
CTNND2-201ENST00000304623 KLHL34Q8N239 644 aa23.11■■□□□ 1.29
CTNND2-201ENST00000304623 DHX29Q7Z478 1369 aaKnown RBP23.11■■□□□ 1.29
CTNND2-201ENST00000304623 LRPPRCP42704 1394 aaKnown RBP23.11■■□□□ 1.29
CTNND2-201ENST00000304623 IGHMBP2P38935 993 aaKnown RBP23.11■■□□□ 1.29
CTNND2-201ENST00000304623 GIMAP7Q8NHV1 300 aa23.1■■□□□ 1.29
CTNND2-201ENST00000304623 TSG101Q99816 390 aa23.1■■□□□ 1.29
CTNND2-201ENST00000304623 FAM107BQ9H098 131 aa23.1■■□□□ 1.29
CTNND2-201ENST00000304623 TIAM1Q13009 1591 aa23.1■■□□□ 1.29
CTNND2-201ENST00000304623 LARP1Q6PKG0 1096 aaKnown RBP23.1■■□□□ 1.29
CTNND2-201ENST00000304623 VPS36Q86VN1 386 aa23.1■■□□□ 1.29
CTNND2-201ENST00000304623 FGFR1OPO95684 399 aaKnown RBP23.09■■□□□ 1.29
CTNND2-201ENST00000304623 MAP2K1Q02750 393 aaPredicted RBP23.09■■□□□ 1.29
CTNND2-201ENST00000304623 UVSSAQ2YD98 709 aa23.09■■□□□ 1.29
CTNND2-201ENST00000304623 CCDC91Q7Z6B0 441 aa23.09■■□□□ 1.29
CTNND2-201ENST00000304623 DYDC1Q8WWB3 177 aa23.09■■□□□ 1.29
CTNND2-201ENST00000304623 ZNF287Q9HBT7 754 aa23.09■■□□□ 1.29
CTNND2-201ENST00000304623 USO1O60763 962 aaKnown RBP23.09■■□□□ 1.29
CTNND2-201ENST00000304623 PAFAH1B1P43034 410 aa23.09■■□□□ 1.29
CTNND2-201ENST00000304623 KLHL10Q6JEL2 608 aa23.09■■□□□ 1.29
CTNND2-201ENST00000304623 CACNA2D4Q7Z3S7 1137 aa23.08■■□□□ 1.29
CTNND2-201ENST00000304623 LUZP1Q86V48 1076 aa23.08■■□□□ 1.28
CTNND2-201ENST00000304623 METTL24Q5JXM2 366 aa23.08■■□□□ 1.28
CTNND2-201ENST00000304623 MICALCLQ6ZW33 695 aa23.08■■□□□ 1.28
CTNND2-201ENST00000304623 BOLA2Q9H3K6 86 aa23.08■■□□□ 1.28
CTNND2-201ENST00000304623 GOLGA6L9A6NEM1 432 aa23.07■■□□□ 1.28
CTNND2-201ENST00000304623 YEATS4O95619 227 aa23.07■■□□□ 1.28
CTNND2-201ENST00000304623 CAVIN2O95810 425 aa23.07■■□□□ 1.28
CTNND2-201ENST00000304623 STX1AQ16623 288 aa23.06■■□□□ 1.28
CTNND2-201ENST00000304623 PIBF1Q8WXW3 757 aa23.06■■□□□ 1.28
CTNND2-201ENST00000304623 IFIT1P09914 478 aaKnown RBP23.06■■□□□ 1.28
CTNND2-201ENST00000304623 CKAP2LQ8IYA6 745 aa23.06■■□□□ 1.28
CTNND2-201ENST00000304623 HECW1Q76N89 1606 aa23.06■■□□□ 1.28
CTNND2-201ENST00000304623 C16orf45Q96MC5 204 aaPredicted RBP23.05■■□□□ 1.28
CTNND2-201ENST00000304623 SEC63Q9UGP8 760 aaKnown RBP23.05■■□□□ 1.28
CTNND2-201ENST00000304623 CCDC61Q9Y6R9 512 aa23.05■■□□□ 1.28
CTNND2-201ENST00000304623 SSR1P43307 286 aaKnown RBP23.05■■□□□ 1.28
CTNND2-201ENST00000304623 BMP2KLQ5H9B9 411 aa23.05■■□□□ 1.28
CTNND2-201ENST00000304623 PRDM10Q9NQV6 1147 aa23.05■■□□□ 1.28
CTNND2-201ENST00000304623 FSIP1Q8NA03 581 aa23.05■■□□□ 1.28
CTNND2-201ENST00000304623 CNNM3Q8NE01 707 aa23.05■■□□□ 1.28
CTNND2-201ENST00000304623 THUMPD2Q9BTF0 503 aaKnown RBP23.05■■□□□ 1.28
CTNND2-201ENST00000304623 PRG4Q92954 1404 aaPredicted RBP23.05■■□□□ 1.28
CTNND2-201ENST00000304623 USP5P45974 858 aa23.05■■□□□ 1.28
CTNND2-201ENST00000304623 ADCY5O95622 1261 aa23.04■■□□□ 1.28
CTNND2-201ENST00000304623 MCM10Q7L590 875 aa23.04■■□□□ 1.28
CTNND2-201ENST00000304623 KLHL40Q2TBA0 621 aa23.04■■□□□ 1.28
CTNND2-201ENST00000304623 NAPBQ9H115 298 aa23.04■■□□□ 1.28
CTNND2-201ENST00000304623 NUP88Q99567 741 aaPredicted RBP23.04■■□□□ 1.28
CTNND2-201ENST00000304623 DYNC1I1O14576 645 aa23.03■■□□□ 1.28
CTNND2-201ENST00000304623 BAG4O95429 457 aaKnown RBP23.03■■□□□ 1.28
CTNND2-201ENST00000304623 RBM5P52756 815 aaKnown RBP eCLIP23.03■■□□□ 1.28
CTNND2-201ENST00000304623 IFFO1Q0D2I5 559 aa23.03■■□□□ 1.28
CTNND2-201ENST00000304623 PRIMPOLQ96LW4 560 aa23.03■■□□□ 1.28
CTNND2-201ENST00000304623 RAB34Q9BZG1 259 aa23.03■■□□□ 1.28
Retrieved 100 of 20,778 RNA–protein pairs in 19.3 ms