RNA–Protein interactions for RNA: ENST00000304449.5

NKRF-201, Transcript of NFKB repressing factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NKRF, Length 3,269 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NKRF-201ENST00000304449 RPAP2Q8IXW5 612 aaPredicted RBP9.74□□□□□ -0.85
NKRF-201ENST00000304449 COG3Q96JB2 828 aa9.74□□□□□ -0.85
NKRF-201ENST00000304449 ZNF830Q96NB3 372 aaPredicted RBP9.74□□□□□ -0.85
NKRF-201ENST00000304449 OSBPL3Q9H4L5 887 aa9.74□□□□□ -0.85
NKRF-201ENST00000304449 USP6P35125 1406 aa9.74□□□□□ -0.85
NKRF-201ENST00000304449 NWD1Q149M9 1564 aa9.74□□□□□ -0.85
NKRF-201ENST00000304449 PDE4CQ08493 712 aa9.73□□□□□ -0.85
NKRF-201ENST00000304449 PKP1Q13835 747 aa9.73□□□□□ -0.85
NKRF-201ENST00000304449 ZSCAN23Q3MJ62 389 aa9.73□□□□□ -0.85
NKRF-201ENST00000304449 TXNDC2Q86VQ3 553 aa9.73□□□□□ -0.85
NKRF-201ENST00000304449 IL17RAQ96F46 866 aa9.73□□□□□ -0.85
NKRF-201ENST00000304449 PTPRCP08575 1304 aa9.73□□□□□ -0.85
NKRF-201ENST00000304449 KDRP35968 1356 aa9.73□□□□□ -0.85
NKRF-201ENST00000304449 SYCE3A1L190 88 aa9.73□□□□□ -0.85
NKRF-201ENST00000304449 PLEKHG3A1L390 1219 aa9.73□□□□□ -0.85
NKRF-201ENST00000304449 TTC21BQ7Z4L5 1316 aa9.73□□□□□ -0.85
NKRF-201ENST00000304449 SMAP1Q8IYB5 467 aaPredicted RBP9.73□□□□□ -0.85
NKRF-201ENST00000304449 PIK3C2AO00443 1686 aa9.72□□□□□ -0.85
NKRF-201ENST00000304449 SDSP20132 328 aa9.72□□□□□ -0.85
NKRF-201ENST00000304449 RABEP1Q15276 862 aa9.72□□□□□ -0.85
NKRF-201ENST00000304449 C17orf53Q8N3J3 647 aaPredicted RBP9.72□□□□□ -0.85
NKRF-201ENST00000304449 NOL7Q9UMY1 257 aaKnown RBP9.72□□□□□ -0.85
NKRF-201ENST00000304449 ZDHHC9Q9Y397 364 aa9.72□□□□□ -0.85
NKRF-201ENST00000304449 PTPRUQ92729 1446 aa9.72□□□□□ -0.85
NKRF-201ENST00000304449 PTMSP20962 102 aa9.72□□□□□ -0.85
NKRF-201ENST00000304449 KLHL40Q2TBA0 621 aa9.72□□□□□ -0.85
NKRF-201ENST00000304449 ABCF1Q8NE71 845 aaKnown RBP eCLIP9.72□□□□□ -0.85
NKRF-201ENST00000304449 ARHGEF10O15013 1369 aa9.71□□□□□ -0.85
NKRF-201ENST00000304449 CEP170BQ9Y4F5 1589 aaPredicted RBP9.71□□□□□ -0.85
NKRF-201ENST00000304449 KIF13AQ9H1H9 1805 aa9.71□□□□□ -0.85
NKRF-201ENST00000304449 VGLL3A8MV65 326 aa9.71□□□□□ -0.86
NKRF-201ENST00000304449 MEIS3Q99687 375 aa9.71□□□□□ -0.86
NKRF-201ENST00000304449 EIF2AK3Q9NZJ5 1116 aaKnown RBP9.71□□□□□ -0.86
NKRF-201ENST00000304449 ZKSCAN5Q9Y2L8 839 aa9.71□□□□□ -0.86
NKRF-201ENST00000304449 TMEM2Q9UHN6 1383 aa9.71□□□□□ -0.86
NKRF-201ENST00000304449 CRYBG1Q9Y4K1 1723 aa9.71□□□□□ -0.86
NKRF-201ENST00000304449 DYNC1I1O14576 645 aa9.71□□□□□ -0.86
NKRF-201ENST00000304449 LMBRD1Q9NUN5 540 aa9.71□□□□□ -0.86
NKRF-201ENST00000304449 ZNF445P59923 1031 aa9.7□□□□□ -0.86
NKRF-201ENST00000304449 SULT6B1Q6IMI4 303 aa9.7□□□□□ -0.86
NKRF-201ENST00000304449 RGPD8O14715 1765 aaPredicted RBP9.7□□□□□ -0.86
NKRF-201ENST00000304449 APBB1O00213 710 aa9.7□□□□□ -0.86
NKRF-201ENST00000304449 NOL8Q76FK4 1167 aaKnown RBP9.7□□□□□ -0.86
NKRF-201ENST00000304449 MCM10Q7L590 875 aa9.7□□□□□ -0.86
NKRF-201ENST00000304449 SASS6Q6UVJ0 657 aa9.69□□□□□ -0.86
NKRF-201ENST00000304449 ACEP12821 1306 aa9.69□□□□□ -0.86
NKRF-201ENST00000304449 CACNA1FO60840 1977 aa9.69□□□□□ -0.86
NKRF-201ENST00000304449 HSP90AB2PQ58FF8 381 aa9.69□□□□□ -0.86
NKRF-201ENST00000304449 PPP4R3BQ5MIZ7 849 aa9.69□□□□□ -0.86
NKRF-201ENST00000304449 CCDC94Q9BW85 323 aaPredicted RBP9.69□□□□□ -0.86
NKRF-201ENST00000304449 STAG3Q9UJ98 1225 aa9.69□□□□□ -0.86
NKRF-201ENST00000304449 SMARCA5O60264 1052 aaPredicted RBP9.69□□□□□ -0.86
NKRF-201ENST00000304449 CSPP1Q1MSJ5 1256 aa9.69□□□□□ -0.86
NKRF-201ENST00000304449 MAP3K19Q56UN5 1328 aa9.68□□□□□ -0.86
NKRF-201ENST00000304449 PLEKHG1Q9ULL1 1385 aa9.68□□□□□ -0.86
NKRF-201ENST00000304449 ZSCAN20P17040 1043 aaPredicted RBP9.68□□□□□ -0.86
NKRF-201ENST00000304449 FAM69CQ0P6D2 419 aa9.68□□□□□ -0.86
NKRF-201ENST00000304449 G2E3Q7L622 706 aa9.68□□□□□ -0.86
NKRF-201ENST00000304449 MED1Q15648 1581 aaPredicted RBP9.68□□□□□ -0.86
NKRF-201ENST00000304449 ZBTB22O15209 634 aa9.67□□□□□ -0.86
NKRF-201ENST00000304449 ZNF500O60304 480 aaPredicted RBP9.67□□□□□ -0.86
NKRF-201ENST00000304449 DMTNQ08495 405 aa9.67□□□□□ -0.86
NKRF-201ENST00000304449 MTERF4Q7Z6M4 381 aaKnown RBP9.67□□□□□ -0.86
NKRF-201ENST00000304449 PLCD3Q8N3E9 789 aa9.67□□□□□ -0.86
NKRF-201ENST00000304449 ZGPATQ8N5A5 531 aaKnown RBP9.67□□□□□ -0.86
NKRF-201ENST00000304449 NSFL1CQ9UNZ2 370 aaKnown RBP9.67□□□□□ -0.86
NKRF-201ENST00000304449 IGSF1Q8N6C5 1336 aa9.67□□□□□ -0.86
NKRF-201ENST00000304449 PXDNLA1KZ92 1463 aa9.67□□□□□ -0.86
NKRF-201ENST00000304449 PDE1AP54750 535 aa9.67□□□□□ -0.86
NKRF-201ENST00000304449 MTHFSDQ2M296 383 aaKnown RBP9.67□□□□□ -0.86
NKRF-201ENST00000304449 GPT2Q8TD30 523 aa9.67□□□□□ -0.86
NKRF-201ENST00000304449 CWC22Q9HCG8 908 aaKnown RBP9.67□□□□□ -0.86
NKRF-201ENST00000304449 SLIT1O75093 1534 aa9.66□□□□□ -0.86
NKRF-201ENST00000304449 FOXO3O43524 673 aa9.66□□□□□ -0.86
NKRF-201ENST00000304449 HAP1P54257 671 aaPredicted RBP9.66□□□□□ -0.86
NKRF-201ENST00000304449 PDLIM2Q96JY6 352 aa9.66□□□□□ -0.86
NKRF-201ENST00000304449 CGNQ9P2M7 1197 aaKnown RBP9.66□□□□□ -0.86
NKRF-201ENST00000304449 CCDC39Q9UFE4 941 aa9.66□□□□□ -0.86
NKRF-201ENST00000304449 ARHGAP23Q9P227 1491 aa9.66□□□□□ -0.86
NKRF-201ENST00000304449 TNRQ92752 1358 aa9.66□□□□□ -0.86
NKRF-201ENST00000304449 DIP2AQ14689 1571 aa9.66□□□□□ -0.86
NKRF-201ENST00000304449 TERF1P54274 439 aa9.66□□□□□ -0.86
NKRF-201ENST00000304449 NUCB2P80303 420 aa9.66□□□□□ -0.86
NKRF-201ENST00000304449 KIAA2012Q0VF49 1180 aa9.66□□□□□ -0.86
NKRF-201ENST00000304449 ATP2B3Q16720 1220 aa9.66□□□□□ -0.86
NKRF-201ENST00000304449 TTC12Q9H892 705 aaPredicted RBP9.66□□□□□ -0.86
NKRF-201ENST00000304449 SBNO1A3KN83 1393 aa9.66□□□□□ -0.86
NKRF-201ENST00000304449 SLC4A2P04920 1241 aa9.65□□□□□ -0.86
NKRF-201ENST00000304449 TMEM63CQ9P1W3 806 aa9.65□□□□□ -0.86
NKRF-201ENST00000304449 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP9.65□□□□□ -0.86
NKRF-201ENST00000304449 CUL4AQ13619 759 aa9.65□□□□□ -0.86
NKRF-201ENST00000304449 GDPD2Q9HCC8 539 aa9.65□□□□□ -0.86
NKRF-201ENST00000304449 LTKP29376 864 aa9.65□□□□□ -0.87
NKRF-201ENST00000304449 ZNF771Q7L3S4 317 aaPredicted RBP9.65□□□□□ -0.87
NKRF-201ENST00000304449 STAP2Q9UGK3 403 aa9.65□□□□□ -0.87
NKRF-201ENST00000304449 KDM3BQ7LBC6 1761 aa9.64□□□□□ -0.87
NKRF-201ENST00000304449 ERC2O15083 957 aa9.64□□□□□ -0.87
NKRF-201ENST00000304449 TTC21AQ8NDW8 1320 aa9.64□□□□□ -0.87
NKRF-201ENST00000304449 FLT4P35916 1363 aa9.64□□□□□ -0.87
NKRF-201ENST00000304449 CCT4P50991 539 aaKnown RBP9.64□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 12.2 ms