RNA–Protein interactions for RNA: ENST00000303758.7

HMGN1P35-201, Transcript of high mobility group nucleosome binding domain 1 pseudogene 35, humanhuman

BASIC

Gene HMGN1P35, Length 594 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1P35-201ENST00000303758 SCN11AQ9UI33 1791 aa14.7□□□□□ -0.06
HMGN1P35-201ENST00000303758 UBR3Q6ZT12 1888 aa14.69□□□□□ -0.06
HMGN1P35-201ENST00000303758 KLHL34Q8N239 644 aa14.69□□□□□ -0.06
HMGN1P35-201ENST00000303758 FHDC1Q9C0D6 1143 aaPredicted RBP14.69□□□□□ -0.06
HMGN1P35-201ENST00000303758 LOC102724428A0A0B4J2F2 783 aa14.68□□□□□ -0.06
HMGN1P35-201ENST00000303758 ERVV-2B6SEH9 535 aa14.68□□□□□ -0.06
HMGN1P35-201ENST00000303758 DIAPH1O60610 1272 aaKnown RBP14.68□□□□□ -0.06
HMGN1P35-201ENST00000303758 SIK1P57059 783 aa14.68□□□□□ -0.06
HMGN1P35-201ENST00000303758 SGIP1Q9BQI5 828 aa14.68□□□□□ -0.06
HMGN1P35-201ENST00000303758 ASAP1Q9ULH1 1129 aa14.68□□□□□ -0.06
HMGN1P35-201ENST00000303758 KDM6AO15550 1401 aaPredicted RBP14.67□□□□□ -0.06
HMGN1P35-201ENST00000303758 HMOX1P09601 288 aa14.67□□□□□ -0.06
HMGN1P35-201ENST00000303758 FLAD1Q8NFF5 587 aa14.67□□□□□ -0.06
HMGN1P35-201ENST00000303758 ZNF831Q5JPB2 1677 aa14.67□□□□□ -0.06
HMGN1P35-201ENST00000303758 ATP6V1AP38606 617 aa14.66□□□□□ -0.06
HMGN1P35-201ENST00000303758 CABP4P57796 275 aa14.66□□□□□ -0.06
HMGN1P35-201ENST00000303758 COL23A1Q86Y22 540 aaPredicted RBP14.66□□□□□ -0.06
HMGN1P35-201ENST00000303758 COL5A3P25940 1745 aaPredicted RBP14.66□□□□□ -0.06
HMGN1P35-201ENST00000303758 PHF14O94880 888 aa14.65□□□□□ -0.06
HMGN1P35-201ENST00000303758 SYT17Q9BSW7 474 aa14.65□□□□□ -0.06
HMGN1P35-201ENST00000303758 RBM42Q9BTD8 480 aaKnown RBP14.65□□□□□ -0.06
HMGN1P35-201ENST00000303758 ATG3Q9NT62 314 aa14.65□□□□□ -0.06
HMGN1P35-201ENST00000303758 COL3A1P02461 1466 aaPredicted RBP14.64□□□□□ -0.07
HMGN1P35-201ENST00000303758 U2SURPO15042 1029 aaKnown RBP14.64□□□□□ -0.07
HMGN1P35-201ENST00000303758 MSL1Q68DK7 614 aa14.64□□□□□ -0.07
HMGN1P35-201ENST00000303758 CFAP53Q96M91 514 aa14.64□□□□□ -0.07
HMGN1P35-201ENST00000303758 MAP3K5Q99683 1374 aa14.63□□□□□ -0.07
HMGN1P35-201ENST00000303758 AKAP4Q5JQC9 854 aa14.63□□□□□ -0.07
HMGN1P35-201ENST00000303758 LINC00116Q8NCU8 138 aa14.63□□□□□ -0.07
HMGN1P35-201ENST00000303758 GNPATO15228 680 aa14.62□□□□□ -0.07
HMGN1P35-201ENST00000303758 SSFA2P28290 1259 aa14.62□□□□□ -0.07
HMGN1P35-201ENST00000303758 CACNB1Q02641 598 aaPredicted RBP14.62□□□□□ -0.07
HMGN1P35-201ENST00000303758 ITPK1Q13572 414 aa14.62□□□□□ -0.07
HMGN1P35-201ENST00000303758 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP14.61□□□□□ -0.07
HMGN1P35-201ENST00000303758 TJP1Q07157 1748 aa14.61□□□□□ -0.07
HMGN1P35-201ENST00000303758 YY1P25490 414 aa14.6□□□□□ -0.07
HMGN1P35-201ENST00000303758 NFATC2IPQ8NCF5 419 aa14.6□□□□□ -0.07
HMGN1P35-201ENST00000303758 CICQ96RK0 1608 aaPredicted RBP14.59□□□□□ -0.07
HMGN1P35-201ENST00000303758 ADAMTS7Q9UKP4 1686 aa14.59□□□□□ -0.07
HMGN1P35-201ENST00000303758 MRC1P22897 1456 aa14.59□□□□□ -0.07
HMGN1P35-201ENST00000303758 PTCD1O75127 700 aaKnown RBP14.59□□□□□ -0.07
HMGN1P35-201ENST00000303758 UTRNP46939 3433 aa14.59□□□□□ -0.07
HMGN1P35-201ENST00000303758 CHD4Q14839 1912 aa14.58□□□□□ -0.07
HMGN1P35-201ENST00000303758 C4AP0C0L4 1744 aa14.58□□□□□ -0.07
HMGN1P35-201ENST00000303758 MTHFSDQ2M296 383 aaKnown RBP14.58□□□□□ -0.08
HMGN1P35-201ENST00000303758 SMIM5Q71RC9 77 aa14.58□□□□□ -0.08
HMGN1P35-201ENST00000303758 AMIGO3Q86WK7 504 aa14.58□□□□□ -0.08
HMGN1P35-201ENST00000303758 PELP1Q8IZL8 1130 aaKnown RBP14.58□□□□□ -0.08
HMGN1P35-201ENST00000303758 SLC52A2Q9HAB3 445 aa14.58□□□□□ -0.08
HMGN1P35-201ENST00000303758 NUDCQ9Y266 331 aa14.58□□□□□ -0.08
HMGN1P35-201ENST00000303758 RTCBQ9Y3I0 505 aaKnown RBP14.58□□□□□ -0.08
HMGN1P35-201ENST00000303758 RNMTO43148 476 aaKnown RBP14.57□□□□□ -0.08
HMGN1P35-201ENST00000303758 GPR162Q16538 588 aa14.57□□□□□ -0.08
HMGN1P35-201ENST00000303758 GAS2L2Q8NHY3 880 aa14.57□□□□□ -0.08
HMGN1P35-201ENST00000303758 GOLGB1Q14789 3259 aaKnown RBP14.57□□□□□ -0.08
HMGN1P35-201ENST00000303758 PPP2R1AP30153 589 aa14.56□□□□□ -0.08
HMGN1P35-201ENST00000303758 SLC4A9Q96Q91 983 aa14.56□□□□□ -0.08
HMGN1P35-201ENST00000303758 LGR6Q9HBX8 967 aa14.56□□□□□ -0.08
HMGN1P35-201ENST00000303758 CNTNAP4Q9C0A0 1308 aa14.56□□□□□ -0.08
HMGN1P35-201ENST00000303758 MYH14Q7Z406 1995 aaKnown RBP14.55□□□□□ -0.08
HMGN1P35-201ENST00000303758 TRAPPC3LQ5T215 181 aa14.55□□□□□ -0.08
HMGN1P35-201ENST00000303758 NLGN2Q8NFZ4 835 aa14.55□□□□□ -0.08
HMGN1P35-201ENST00000303758 SIPA1L3O60292 1781 aaPredicted RBP14.55□□□□□ -0.08
HMGN1P35-201ENST00000303758 UBR2Q8IWV8 1755 aa14.55□□□□□ -0.08
HMGN1P35-201ENST00000303758 RC3H1Q5TC82 1133 aaKnown RBP14.54□□□□□ -0.08
HMGN1P35-201ENST00000303758 GNAT3A8MTJ3 354 aa14.53□□□□□ -0.08
HMGN1P35-201ENST00000303758 U2AF1L5P0DN76 240 aaPredicted RBP14.53□□□□□ -0.08
HMGN1P35-201ENST00000303758 PRKAR2BP31323 418 aa14.53□□□□□ -0.08
HMGN1P35-201ENST00000303758 RFC4P35249 363 aa14.53□□□□□ -0.08
HMGN1P35-201ENST00000303758 U2AF1Q01081 240 aaKnown RBP eCLIP14.53□□□□□ -0.08
HMGN1P35-201ENST00000303758 TEFQ10587 303 aa14.53□□□□□ -0.08
HMGN1P35-201ENST00000303758 KCPQ6ZWJ8 1503 aa14.52□□□□□ -0.08
HMGN1P35-201ENST00000303758 RPS6KA4O75676 772 aa14.52□□□□□ -0.09
HMGN1P35-201ENST00000303758 CRKLP46109 303 aaKnown RBP14.52□□□□□ -0.09
HMGN1P35-201ENST00000303758 SLC39A6Q13433 755 aa14.52□□□□□ -0.09
HMGN1P35-201ENST00000303758 TTC5Q8N0Z6 440 aa14.52□□□□□ -0.09
HMGN1P35-201ENST00000303758 CD2APQ9Y5K6 639 aa14.52□□□□□ -0.09
HMGN1P35-201ENST00000303758 RSPH6AQ9H0K4 717 aa14.51□□□□□ -0.09
HMGN1P35-201ENST00000303758 NEFMP07197 916 aa14.5□□□□□ -0.09
HMGN1P35-201ENST00000303758 MMP10P09238 476 aa14.5□□□□□ -0.09
HMGN1P35-201ENST00000303758 DNAJC10Q8IXB1 793 aa14.5□□□□□ -0.09
HMGN1P35-201ENST00000303758 ARHGEF1Q92888 912 aaKnown RBP14.5□□□□□ -0.09
HMGN1P35-201ENST00000303758 C1QBPQ07021 282 aaKnown RBP14.49□□□□□ -0.09
HMGN1P35-201ENST00000303758 NLGN1Q8N2Q7 840 aa14.49□□□□□ -0.09
HMGN1P35-201ENST00000303758 CCDC87Q9NVE4 849 aa14.49□□□□□ -0.09
HMGN1P35-201ENST00000303758 KIF13BQ9NQT8 1826 aa14.48□□□□□ -0.09
HMGN1P35-201ENST00000303758 RTF1Q92541 710 aaKnown RBP14.48□□□□□ -0.09
HMGN1P35-201ENST00000303758 PHACTR3Q96KR7 559 aa14.48□□□□□ -0.09
HMGN1P35-201ENST00000303758 DLG5Q8TDM6 1919 aa14.47□□□□□ -0.09
HMGN1P35-201ENST00000303758 GRIN3BO60391 1043 aa14.47□□□□□ -0.09
HMGN1P35-201ENST00000303758 FCHSD2O94868 740 aa14.47□□□□□ -0.09
HMGN1P35-201ENST00000303758 GYS1P13807 737 aa14.47□□□□□ -0.09
HMGN1P35-201ENST00000303758 VSIG10Q8N0Z9 540 aa14.47□□□□□ -0.09
HMGN1P35-201ENST00000303758 PARP3Q9Y6F1 533 aa14.47□□□□□ -0.09
HMGN1P35-201ENST00000303758 N4BP2Q86UW6 1770 aaPredicted RBP14.47□□□□□ -0.09
HMGN1P35-201ENST00000303758 USP42Q9H9J4 1324 aaKnown RBP14.46□□□□□ -0.09
HMGN1P35-201ENST00000303758 IL17REQ8NFR9 667 aa14.46□□□□□ -0.09
HMGN1P35-201ENST00000303758 COL15A1P39059 1388 aa14.46□□□□□ -0.1
HMGN1P35-201ENST00000303758 ZPR1O75312 459 aa14.45□□□□□ -0.1
HMGN1P35-201ENST00000303758 CYP19A1P11511 503 aaPredicted RBP14.45□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 14.8 ms