RNA–Protein interactions for RNA: ENST00000303391.10

MECP2-201, Transcript of methyl-CpG binding protein 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene MECP2, Length 10,505 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MECP2-201ENST00000303391 GPRASP1Q5JY77 1395 aa12.66□□□□□ -0.38
MECP2-201ENST00000303391 HOOK3Q86VS8 718 aa12.66□□□□□ -0.38
MECP2-201ENST00000303391 ADAMTS8Q9UP79 889 aa12.66□□□□□ -0.38
MECP2-201ENST00000303391 BCL11BQ9C0K0 894 aaPredicted RBP12.66□□□□□ -0.38
MECP2-201ENST00000303391 TRAK1Q9UPV9 953 aa12.66□□□□□ -0.38
MECP2-201ENST00000303391 KANK3Q6NY19 840 aa12.65□□□□□ -0.38
MECP2-201ENST00000303391 GNL3LQ9NVN8 582 aaKnown RBP12.65□□□□□ -0.38
MECP2-201ENST00000303391 DAPK1P53355 1430 aa12.65□□□□□ -0.38
MECP2-201ENST00000303391 ADCY5O95622 1261 aa12.65□□□□□ -0.38
MECP2-201ENST00000303391 PAIP2Q9BPZ3 127 aaKnown RBP12.65□□□□□ -0.38
MECP2-201ENST00000303391 FYB1O15117 783 aa12.65□□□□□ -0.38
MECP2-201ENST00000303391 SREK1Q8WXA9 508 aaKnown RBP12.65□□□□□ -0.38
MECP2-201ENST00000303391 SURF6O75683 361 aaKnown RBP12.65□□□□□ -0.38
MECP2-201ENST00000303391 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP12.65□□□□□ -0.39
MECP2-201ENST00000303391 RAB11FIP3O75154 756 aa12.65□□□□□ -0.39
MECP2-201ENST00000303391 GBP6Q6ZN66 633 aa12.65□□□□□ -0.39
MECP2-201ENST00000303391 CCDC69A6NI79 296 aa12.64□□□□□ -0.39
MECP2-201ENST00000303391 KIF3CO14782 793 aa12.64□□□□□ -0.39
MECP2-201ENST00000303391 POTEDQ86YR6 584 aa12.64□□□□□ -0.39
MECP2-201ENST00000303391 U3KPZ7 1027 aaPredicted RBP12.64□□□□□ -0.39
MECP2-201ENST00000303391 TNPO1Q92973 898 aaKnown RBP12.64□□□□□ -0.39
MECP2-201ENST00000303391 TSG101Q99816 390 aa12.64□□□□□ -0.39
MECP2-201ENST00000303391 TUBB2AQ13885 445 aa12.63□□□□□ -0.39
MECP2-201ENST00000303391 TUBB2BQ9BVA1 445 aa12.63□□□□□ -0.39
MECP2-201ENST00000303391 PPP2R1AP30153 589 aa12.63□□□□□ -0.39
MECP2-201ENST00000303391 TCP11L2Q8N4U5 519 aa12.63□□□□□ -0.39
MECP2-201ENST00000303391 TANGO6Q9C0B7 1094 aa12.63□□□□□ -0.39
MECP2-201ENST00000303391 ZKSCAN5Q9Y2L8 839 aa12.63□□□□□ -0.39
MECP2-201ENST00000303391 LRSAM1Q6UWE0 723 aa12.63□□□□□ -0.39
MECP2-201ENST00000303391 CCDC196A0A1B0GTZ2 297 aa12.63□□□□□ -0.39
MECP2-201ENST00000303391 EIF2S2P20042 333 aaKnown RBP12.63□□□□□ -0.39
MECP2-201ENST00000303391 CCDC121Q6ZUS5 278 aa12.63□□□□□ -0.39
MECP2-201ENST00000303391 LIG1P18858 919 aa12.63□□□□□ -0.39
MECP2-201ENST00000303391 RIC3Q7Z5B4 369 aa12.63□□□□□ -0.39
MECP2-201ENST00000303391 CNKSR2Q8WXI2 1034 aa12.63□□□□□ -0.39
MECP2-201ENST00000303391 NOB1Q9ULX3 412 aaKnown RBP12.63□□□□□ -0.39
MECP2-201ENST00000303391 PLVAPQ9BX97 442 aa12.63□□□□□ -0.39
MECP2-201ENST00000303391 CCDC9Q9Y3X0 531 aaKnown RBP12.63□□□□□ -0.39
MECP2-201ENST00000303391 CTAGE1Q96RT6 745 aa12.62□□□□□ -0.39
MECP2-201ENST00000303391 ANKRD50Q9ULJ7 1429 aa12.62□□□□□ -0.39
MECP2-201ENST00000303391 CLGNO14967 610 aa12.62□□□□□ -0.39
MECP2-201ENST00000303391 RPAP2Q8IXW5 612 aaPredicted RBP12.62□□□□□ -0.39
MECP2-201ENST00000303391 CCDC155Q8N6L0 562 aa12.62□□□□□ -0.39
MECP2-201ENST00000303391 GOLGA1Q92805 767 aa12.62□□□□□ -0.39
MECP2-201ENST00000303391 TMCO5BA8MYB1 307 aa12.62□□□□□ -0.39
MECP2-201ENST00000303391 CEBPZQ03701 1054 aaKnown RBP12.62□□□□□ -0.39
MECP2-201ENST00000303391 NCOA2Q15596 1464 aa12.62□□□□□ -0.39
MECP2-201ENST00000303391 FSD2A1L4K1 749 aa12.62□□□□□ -0.39
MECP2-201ENST00000303391 AIMP1Q12904 312 aaKnown RBP12.62□□□□□ -0.39
MECP2-201ENST00000303391 KIF5BP33176 963 aa12.62□□□□□ -0.39
MECP2-201ENST00000303391 SARNPP82979 210 aaKnown RBP12.62□□□□□ -0.39
MECP2-201ENST00000303391 MAPK8IP2Q13387 824 aaPredicted RBP12.62□□□□□ -0.39
MECP2-201ENST00000303391 ERBINQ96RT1 1412 aa12.62□□□□□ -0.39
MECP2-201ENST00000303391 SH2D4BQ5SQS7 431 aa12.62□□□□□ -0.39
MECP2-201ENST00000303391 CCDC158Q5M9N0 1113 aa12.62□□□□□ -0.39
MECP2-201ENST00000303391 ARFGAP2Q8N6H7 521 aa12.62□□□□□ -0.39
MECP2-201ENST00000303391 CEP83Q9Y592 693 aa12.62□□□□□ -0.39
MECP2-201ENST00000303391 LRPPRCP42704 1394 aaKnown RBP12.61□□□□□ -0.39
MECP2-201ENST00000303391 KIAA1107Q9UPP5 1409 aa12.61□□□□□ -0.39
MECP2-201ENST00000303391 HMGB1P1B2RPK0 211 aaPredicted RBP12.61□□□□□ -0.39
MECP2-201ENST00000303391 CCDC141Q6ZP82 1450 aa12.61□□□□□ -0.39
MECP2-201ENST00000303391 NEUROD6Q96NK8 337 aa12.61□□□□□ -0.39
MECP2-201ENST00000303391 RAI14Q9P0K7 980 aa12.61□□□□□ -0.39
MECP2-201ENST00000303391 MSH5O43196 834 aa12.61□□□□□ -0.39
MECP2-201ENST00000303391 ALDH1L2Q3SY69 923 aa12.61□□□□□ -0.39
MECP2-201ENST00000303391 ZFYP08048 801 aaPredicted RBP12.61□□□□□ -0.39
MECP2-201ENST00000303391 CASTP20810 708 aaKnown RBP12.61□□□□□ -0.39
MECP2-201ENST00000303391 RASAL2Q9UJF2 1139 aa12.61□□□□□ -0.39
MECP2-201ENST00000303391 SPECC1Q5M775 1068 aa12.6□□□□□ -0.39
MECP2-201ENST00000303391 USH1CQ9Y6N9 552 aa12.6□□□□□ -0.39
MECP2-201ENST00000303391 RPGRIP1LQ68CZ1 1315 aa12.6□□□□□ -0.39
MECP2-201ENST00000303391 GSTTP1A0A1W2PQM5 241 aa12.6□□□□□ -0.39
MECP2-201ENST00000303391 SLU7O95391 586 aaKnown RBP12.6□□□□□ -0.39
MECP2-201ENST00000303391 NOLC1Q14978 699 aaKnown RBP eCLIP12.6□□□□□ -0.39
MECP2-201ENST00000303391 NBPF11Q86T75 865 aa12.6□□□□□ -0.39
MECP2-201ENST00000303391 CTAGE9A4FU28 777 aa12.6□□□□□ -0.39
MECP2-201ENST00000303391 PRPHP41219 470 aa12.6□□□□□ -0.39
MECP2-201ENST00000303391 OTUD6BQ8N6M0 293 aa12.6□□□□□ -0.39
MECP2-201ENST00000303391 NUP88Q99567 741 aaPredicted RBP12.6□□□□□ -0.39
MECP2-201ENST00000303391 TWISTNBQ3B726 338 aaPredicted RBP12.6□□□□□ -0.39
MECP2-201ENST00000303391 IFT74Q96LB3 600 aa12.6□□□□□ -0.39
MECP2-201ENST00000303391 MIPOL1Q8TD10 442 aa12.6□□□□□ -0.39
MECP2-201ENST00000303391 JAKMIP1Q96N16 626 aaKnown RBP12.6□□□□□ -0.39
MECP2-201ENST00000303391 MKRN1Q9UHC7 482 aaKnown RBP12.6□□□□□ -0.39
MECP2-201ENST00000303391 LIMCH1Q9UPQ0 1083 aa12.6□□□□□ -0.39
MECP2-201ENST00000303391 RAB34Q9BZG1 259 aa12.59□□□□□ -0.39
MECP2-201ENST00000303391 ZSCAN23Q3MJ62 389 aa12.59□□□□□ -0.39
MECP2-201ENST00000303391 ZSCAN16Q9H4T2 348 aaPredicted RBP12.59□□□□□ -0.39
MECP2-201ENST00000303391 CCDC172P0C7W6 258 aa12.59□□□□□ -0.39
MECP2-201ENST00000303391 CAPN2P17655 700 aa12.59□□□□□ -0.39
MECP2-201ENST00000303391 TBC1D32Q96NH3 1257 aa12.59□□□□□ -0.39
MECP2-201ENST00000303391 TBC1D2Q9BYX2 928 aa12.59□□□□□ -0.39
MECP2-201ENST00000303391 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP12.59□□□□□ -0.392e-7■■■□□ 15.8
MECP2-201ENST00000303391 LTV1Q96GA3 475 aaPredicted RBP12.59□□□□□ -0.39
MECP2-201ENST00000303391 CCDC6Q16204 474 aa12.58□□□□□ -0.4
MECP2-201ENST00000303391 HDXQ7Z353 690 aa12.58□□□□□ -0.4
MECP2-201ENST00000303391 CCDC113Q9H0I3 377 aa12.58□□□□□ -0.4
MECP2-201ENST00000303391 HNRNPMP52272 730 aaKnown RBP eCLIP12.58□□□□□ -0.43e-7■■■■□ 24.6
MECP2-201ENST00000303391 NOL3O60936 208 aaKnown RBP12.58□□□□□ -0.4
MECP2-201ENST00000303391 BMP2KLQ5H9B9 411 aa12.58□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 20 ms