RNA–Protein interactions for RNA: ENST00000303383.7

SHCBP1-201, Transcript of SHC binding and spindle associated 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SHCBP1, Length 3,461 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHCBP1-201ENST00000303383 EIF4A1P60842 406 aaKnown RBP18.26■□□□□ 0.51
SHCBP1-201ENST00000303383 G2E3Q7L622 706 aa18.26■□□□□ 0.51
SHCBP1-201ENST00000303383 FLIIQ13045 1269 aa18.25■□□□□ 0.51
SHCBP1-201ENST00000303383 HSP90AB1P08238 724 aaKnown RBP18.25■□□□□ 0.51
SHCBP1-201ENST00000303383 ANP32AP39687 249 aaKnown RBP18.25■□□□□ 0.51
SHCBP1-201ENST00000303383 INTS3Q68E01 1043 aaKnown RBP18.25■□□□□ 0.51
SHCBP1-201ENST00000303383 PHKG2P15735 406 aa18.25■□□□□ 0.51
SHCBP1-201ENST00000303383 LMO7Q8WWI1 1683 aa18.25■□□□□ 0.51
SHCBP1-201ENST00000303383 COL18A1P39060 1754 aa18.24■□□□□ 0.51
SHCBP1-201ENST00000303383 CAMTA1Q9Y6Y1 1673 aa18.24■□□□□ 0.51
SHCBP1-201ENST00000303383 BACH2Q9BYV9 841 aa18.24■□□□□ 0.51
SHCBP1-201ENST00000303383 F6X3S4 739 aa18.24■□□□□ 0.51
SHCBP1-201ENST00000303383 KCNQ3O43525 872 aa18.24■□□□□ 0.51
SHCBP1-201ENST00000303383 CCT4P50991 539 aaKnown RBP18.24■□□□□ 0.51
SHCBP1-201ENST00000303383 NPM2Q86SE8 214 aaKnown RBP18.24■□□□□ 0.51
SHCBP1-201ENST00000303383 HOXB7P09629 217 aa18.23■□□□□ 0.51
SHCBP1-201ENST00000303383 MEGF6O75095 1541 aa18.23■□□□□ 0.51
SHCBP1-201ENST00000303383 FAM208AQ9UK61 1670 aaKnown RBP18.23■□□□□ 0.51
SHCBP1-201ENST00000303383 FAM161AQ3B820 660 aa18.22■□□□□ 0.51
SHCBP1-201ENST00000303383 USP35Q9P2H5 1018 aa18.22■□□□□ 0.51
SHCBP1-201ENST00000303383 ZBTB47Q9UFB7 747 aaPredicted RBP18.22■□□□□ 0.51
SHCBP1-201ENST00000303383 OVOS2A0A0G2JMS6 1433 aa18.22■□□□□ 0.51
SHCBP1-201ENST00000303383 CRYBG1Q9Y4K1 1723 aa18.22■□□□□ 0.51
SHCBP1-201ENST00000303383 TTC5Q8N0Z6 440 aa18.21■□□□□ 0.51
SHCBP1-201ENST00000303383 DCAF5Q96JK2 942 aa18.21■□□□□ 0.51
SHCBP1-201ENST00000303383 NHSL1Q5SYE7 1610 aa18.21■□□□□ 0.51
SHCBP1-201ENST00000303383 ZCRB1Q8TBF4 217 aaKnown RBP18.21■□□□□ 0.51
SHCBP1-201ENST00000303383 SLC52A2Q9HAB3 445 aa18.21■□□□□ 0.51
SHCBP1-201ENST00000303383 NFATC2IPQ8NCF5 419 aa18.2■□□□□ 0.5
SHCBP1-201ENST00000303383 IL2RBP14784 551 aa18.2■□□□□ 0.5
SHCBP1-201ENST00000303383 CABP4P57796 275 aa18.2■□□□□ 0.5
SHCBP1-201ENST00000303383 CARD10Q9BWT7 1032 aa18.19■□□□□ 0.5
SHCBP1-201ENST00000303383 LARP1Q6PKG0 1096 aaKnown RBP18.19■□□□□ 0.5
SHCBP1-201ENST00000303383 CHPF2Q9P2E5 772 aa18.19■□□□□ 0.5
SHCBP1-201ENST00000303383 PIP4K2BP78356 416 aa18.19■□□□□ 0.5
SHCBP1-201ENST00000303383 BTG4Q9NY30 223 aa18.19■□□□□ 0.5
SHCBP1-201ENST00000303383 COL5A2P05997 1499 aaPredicted RBP18.19■□□□□ 0.5
SHCBP1-201ENST00000303383 CYP27B1O15528 508 aa18.18■□□□□ 0.5
SHCBP1-201ENST00000303383 SLC39A6Q13433 755 aa18.18■□□□□ 0.5
SHCBP1-201ENST00000303383 SMC5Q8IY18 1101 aa18.18■□□□□ 0.5
SHCBP1-201ENST00000303383 GCC1Q96CN9 775 aa18.18■□□□□ 0.5
SHCBP1-201ENST00000303383 PCDH11XQ9BZA7 1347 aa18.18■□□□□ 0.5
SHCBP1-201ENST00000303383 PCDH11YQ9BZA8 1340 aa18.18■□□□□ 0.5
SHCBP1-201ENST00000303383 DDX54Q8TDD1 881 aaKnown RBP18.18■□□□□ 0.5
SHCBP1-201ENST00000303383 DBF4Q9UBU7 674 aaPredicted RBP18.18■□□□□ 0.5
SHCBP1-201ENST00000303383 RGS12O14924 1447 aa18.17■□□□□ 0.5
SHCBP1-201ENST00000303383 TOM1O60784 492 aa18.17■□□□□ 0.5
SHCBP1-201ENST00000303383 ZNF790Q6PG37 636 aa18.17■□□□□ 0.5
SHCBP1-201ENST00000303383 MEIS3Q99687 375 aa18.17■□□□□ 0.5
SHCBP1-201ENST00000303383 PHAXQ9H814 394 aaKnown RBP18.17■□□□□ 0.5
SHCBP1-201ENST00000303383 PLEKHG2Q9H7P9 1386 aa18.17■□□□□ 0.5
SHCBP1-201ENST00000303383 ANKRD45Q5TZF3 282 aa18.17■□□□□ 0.5
SHCBP1-201ENST00000303383 ROBO1Q9Y6N7 1651 aa18.17■□□□□ 0.5
SHCBP1-201ENST00000303383 GIGYF1O75420 1035 aaPredicted RBP18.16■□□□□ 0.5
SHCBP1-201ENST00000303383 CACNA1FO60840 1977 aa18.16■□□□□ 0.5
SHCBP1-201ENST00000303383 RPAP2Q8IXW5 612 aaPredicted RBP18.15■□□□□ 0.5
SHCBP1-201ENST00000303383 LNPKQ9C0E8 428 aa18.15■□□□□ 0.5
SHCBP1-201ENST00000303383 ANXA1P04083 346 aa18.15■□□□□ 0.5
SHCBP1-201ENST00000303383 HMMRO75330 724 aa18.15■□□□□ 0.5
SHCBP1-201ENST00000303383 GNAI3P08754 354 aa18.15■□□□□ 0.5
SHCBP1-201ENST00000303383 KDM3BQ7LBC6 1761 aa18.15■□□□□ 0.5
SHCBP1-201ENST00000303383 KDM6AO15550 1401 aaPredicted RBP18.14■□□□□ 0.5
SHCBP1-201ENST00000303383 VIRMAQ69YN4 1812 aaKnown RBP18.14■□□□□ 0.49
SHCBP1-201ENST00000303383 GNAI2P04899 355 aa18.13■□□□□ 0.49
SHCBP1-201ENST00000303383 CHD1LQ86WJ1 897 aa18.13■□□□□ 0.49
SHCBP1-201ENST00000303383 ABCA3Q99758 1704 aa18.13■□□□□ 0.49
SHCBP1-201ENST00000303383 ADAMTS2O95450 1211 aa18.13■□□□□ 0.49
SHCBP1-201ENST00000303383 NUCB1Q02818 461 aa18.13■□□□□ 0.49
SHCBP1-201ENST00000303383 ANKRD44Q8N8A2 993 aa18.13■□□□□ 0.49
SHCBP1-201ENST00000303383 SRCIN1Q9C0H9 1055 aa18.13■□□□□ 0.49
SHCBP1-201ENST00000303383 FMNL2Q96PY5 1086 aa18.12■□□□□ 0.49
SHCBP1-201ENST00000303383 LTBP4Q8N2S1 1624 aa18.12■□□□□ 0.49
SHCBP1-201ENST00000303383 PI4KAP2A4QPH2 592 aa18.11■□□□□ 0.49
SHCBP1-201ENST00000303383 C8orf34Q49A92 452 aa18.11■□□□□ 0.49
SHCBP1-201ENST00000303383 PI4KAP1Q8N8J0 262 aa18.11■□□□□ 0.49
SHCBP1-201ENST00000303383 HYPKQ9NX55 129 aa18.11■□□□□ 0.49
SHCBP1-201ENST00000303383 DDX58O95786 925 aaKnown RBP18.11■□□□□ 0.49
SHCBP1-201ENST00000303383 SIRT2Q8IXJ6 389 aa18.11■□□□□ 0.49
SHCBP1-201ENST00000303383 DNAAF4Q8WXU2 420 aa18.11■□□□□ 0.49
SHCBP1-201ENST00000303383 PRAMEF22A3QJZ6 481 aa18.11■□□□□ 0.49
SHCBP1-201ENST00000303383 NUTM2BA6NNL0 878 aaPredicted RBP18.11■□□□□ 0.49
SHCBP1-201ENST00000303383 NUTM2EB1AL46 878 aaPredicted RBP18.11■□□□□ 0.49
SHCBP1-201ENST00000303383 CEP85Q6P2H3 762 aa18.11■□□□□ 0.49
SHCBP1-201ENST00000303383 NUTM2AQ8IVF1 878 aaPredicted RBP18.11■□□□□ 0.49
SHCBP1-201ENST00000303383 UBTFL1P0CB47 393 aaPredicted RBP18.1■□□□□ 0.49
SHCBP1-201ENST00000303383 AIMP1Q12904 312 aaKnown RBP18.1■□□□□ 0.49
SHCBP1-201ENST00000303383 ZNF496Q96IT1 587 aaPredicted RBP18.1■□□□□ 0.49
SHCBP1-201ENST00000303383 PARP4Q9UKK3 1724 aaKnown RBP18.1■□□□□ 0.49
SHCBP1-201ENST00000303383 SCN11AQ9UI33 1791 aa18.1■□□□□ 0.49
SHCBP1-201ENST00000303383 SNRPA1P09661 255 aaKnown RBP18.1■□□□□ 0.49
SHCBP1-201ENST00000303383 APBB1O00213 710 aa18.09■□□□□ 0.49
SHCBP1-201ENST00000303383 AHDC1Q5TGY3 1603 aaPredicted RBP18.09■□□□□ 0.49
SHCBP1-201ENST00000303383 UBAP1LF5GYI3 381 aa18.09■□□□□ 0.49
SHCBP1-201ENST00000303383 UPF2Q9HAU5 1272 aaKnown RBP18.08■□□□□ 0.49
SHCBP1-201ENST00000303383 MYL6BP14649 208 aa18.08■□□□□ 0.49
SHCBP1-201ENST00000303383 DDX21Q9NR30 783 aaKnown RBP eCLIP18.08■□□□□ 0.49
SHCBP1-201ENST00000303383 PKD1L3Q7Z443 1732 aa18.08■□□□□ 0.48
SHCBP1-201ENST00000303383 ERVV-2B6SEH9 535 aa18.08■□□□□ 0.48
SHCBP1-201ENST00000303383 DCTPP1Q9H773 170 aa18.07■□□□□ 0.48
SHCBP1-201ENST00000303383 PROSER3Q2NL68 480 aa18.07■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 242.6 ms