RNA–Protein interactions for RNA: ENST00000302787.2

LETM1-201, Transcript of leucine zipper and EF-hand containing transmembrane protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LETM1, Length 5,462 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LETM1-201ENST00000302787 LRRFIP2Q9Y608 721 aaKnown RBP24.73■■□□□ 1.55
LETM1-201ENST00000302787 ZC3H6P61129 1189 aaKnown RBP24.72■■□□□ 1.55
LETM1-201ENST00000302787 SPINK5Q9NQ38 1064 aaPredicted RBP24.72■■□□□ 1.55
LETM1-201ENST00000302787 U3KPZ7 1027 aaPredicted RBP24.72■■□□□ 1.55
LETM1-201ENST00000302787 ADGRL1O94910 1474 aa24.71■■□□□ 1.55
LETM1-201ENST00000302787 PTPRCP08575 1304 aa24.71■■□□□ 1.55
LETM1-201ENST00000302787 RAI14Q9P0K7 980 aa24.71■■□□□ 1.55
LETM1-201ENST00000302787 TBC1D9Q6ZT07 1266 aa24.71■■□□□ 1.55
LETM1-201ENST00000302787 AIDAQ96BJ3 306 aa24.71■■□□□ 1.55
LETM1-201ENST00000302787 LUC7LQ9NQ29 371 aaKnown RBP24.71■■□□□ 1.55
LETM1-201ENST00000302787 BMP2KLQ5H9B9 411 aa24.71■■□□□ 1.55
LETM1-201ENST00000302787 TANGO6Q9C0B7 1094 aa24.71■■□□□ 1.55
LETM1-201ENST00000302787 SCAND2PQ9GZW5 306 aaPredicted RBP24.71■■□□□ 1.55
LETM1-201ENST00000302787 ERLIN1O75477 346 aa24.7■■□□□ 1.54
LETM1-201ENST00000302787 SYCP1Q15431 976 aa24.7■■□□□ 1.54
LETM1-201ENST00000302787 USHBP1Q8N6Y0 703 aa24.7■■□□□ 1.54
LETM1-201ENST00000302787 MYD88Q99836 296 aa24.69■■□□□ 1.54
LETM1-201ENST00000302787 NOS1P29475 1434 aa24.69■■□□□ 1.54
LETM1-201ENST00000302787 CCDC181Q5TID7 509 aa24.69■■□□□ 1.54
LETM1-201ENST00000302787 LRP2BPQ9P2M1 347 aa24.69■■□□□ 1.54
LETM1-201ENST00000302787 GRIN2AQ12879 1464 aa24.69■■□□□ 1.54
LETM1-201ENST00000302787 DNAAF4Q8WXU2 420 aa24.69■■□□□ 1.54
LETM1-201ENST00000302787 ZHX3Q9H4I2 956 aa24.69■■□□□ 1.54
LETM1-201ENST00000302787 LIMCH1Q9UPQ0 1083 aa24.68■■□□□ 1.54
LETM1-201ENST00000302787 WASLO00401 505 aaPredicted RBP24.68■■□□□ 1.54
LETM1-201ENST00000302787 RRP9O43818 475 aaKnown RBP24.68■■□□□ 1.54
LETM1-201ENST00000302787 TBC1D32Q96NH3 1257 aa24.68■■□□□ 1.54
LETM1-201ENST00000302787 AKAP2Q9Y2D5 859 aa24.68■■□□□ 1.54
LETM1-201ENST00000302787 METTL24Q5JXM2 366 aa24.68■■□□□ 1.54
LETM1-201ENST00000302787 TXLNBQ8N3L3 684 aa24.68■■□□□ 1.54
LETM1-201ENST00000302787 RDXP35241 583 aaKnown RBP24.67■■□□□ 1.54
LETM1-201ENST00000302787 CFAP100Q494V2 611 aa24.67■■□□□ 1.54
LETM1-201ENST00000302787 POGZQ7Z3K3 1410 aa24.67■■□□□ 1.54
LETM1-201ENST00000302787 LAMC3Q9Y6N6 1575 aa24.67■■□□□ 1.54
LETM1-201ENST00000302787 CD109Q6YHK3 1445 aa24.67■■□□□ 1.54
LETM1-201ENST00000302787 CCDC8Q9H0W5 538 aaPredicted RBP24.67■■□□□ 1.54
LETM1-201ENST00000302787 AMOTQ4VCS5 1084 aa24.66■■□□□ 1.54
LETM1-201ENST00000302787 CEP131Q9UPN4 1083 aa24.66■■□□□ 1.54
LETM1-201ENST00000302787 DHX29Q7Z478 1369 aaKnown RBP24.66■■□□□ 1.54
LETM1-201ENST00000302787 FLIIQ13045 1269 aa24.65■■□□□ 1.54
LETM1-201ENST00000302787 IGHMBP2P38935 993 aaKnown RBP24.65■■□□□ 1.54
LETM1-201ENST00000302787 EIF3JO75822 258 aaKnown RBP24.65■■□□□ 1.54
LETM1-201ENST00000302787 IFIT1P09914 478 aaKnown RBP24.65■■□□□ 1.54
LETM1-201ENST00000302787 KLHL34Q8N239 644 aa24.65■■□□□ 1.54
LETM1-201ENST00000302787 ANO10Q9NW15 660 aa24.65■■□□□ 1.54
LETM1-201ENST00000302787 IL16Q14005 1332 aa24.65■■□□□ 1.54
LETM1-201ENST00000302787 MBIPQ9NS73 344 aa24.65■■□□□ 1.54
LETM1-201ENST00000302787 MAPKBP1O60336 1514 aa24.65■■□□□ 1.54
LETM1-201ENST00000302787 C14orf93Q9H972 538 aaKnown RBP24.64■■□□□ 1.54
LETM1-201ENST00000302787 ERLIN2O94905 339 aa24.63■■□□□ 1.53
LETM1-201ENST00000302787 STARD3NLO95772 234 aa24.63■■□□□ 1.53
LETM1-201ENST00000302787 PDCL2Q8N4E4 241 aa24.63■■□□□ 1.53
LETM1-201ENST00000302787 TSPYL1Q9H0U9 437 aa24.63■■□□□ 1.53
LETM1-201ENST00000302787 HMGB1P09429 215 aaKnown RBP24.63■■□□□ 1.53
LETM1-201ENST00000302787 PIBF1Q8WXW3 757 aa24.63■■□□□ 1.53
LETM1-201ENST00000302787 IDI1Q13907 227 aa24.62■■□□□ 1.53
LETM1-201ENST00000302787 GOLGA6L10A6NI86 522 aa24.62■■□□□ 1.53
LETM1-201ENST00000302787 EPB41L2O43491 1005 aaKnown RBP24.62■■□□□ 1.53
LETM1-201ENST00000302787 TTC22Q5TAA0 569 aa24.62■■□□□ 1.53
LETM1-201ENST00000302787 SFPQP23246 707 aaKnown RBP eCLIP24.62■■□□□ 1.53
LETM1-201ENST00000302787 MPRIPQ6WCQ1 1025 aa24.62■■□□□ 1.53
LETM1-201ENST00000302787 DBF4Q9UBU7 674 aaPredicted RBP24.61■■□□□ 1.53
LETM1-201ENST00000302787 UTP3Q9NQZ2 479 aaKnown RBP eCLIP24.61■■□□□ 1.531e-6■■■■■ 85.7
LETM1-201ENST00000302787 BMP2KQ9NSY1 1161 aaPredicted RBP24.61■■□□□ 1.53
LETM1-201ENST00000302787 C8orf76Q96K31 380 aa24.61■■□□□ 1.53
LETM1-201ENST00000302787 BIVM-ERCC5R4GMW8 1640 aa24.6■■□□□ 1.53
LETM1-201ENST00000302787 SSBP05455 408 aaKnown RBP eCLIP24.6■■□□□ 1.53
LETM1-201ENST00000302787 PTPN14Q15678 1187 aa24.6■■□□□ 1.53
LETM1-201ENST00000302787 PTCD1O75127 700 aaKnown RBP24.6■■□□□ 1.53
LETM1-201ENST00000302787 ABCF2Q9UG63 623 aa24.6■■□□□ 1.53
LETM1-201ENST00000302787 ANKRD36BQ8N2N9 1353 aa24.6■■□□□ 1.53
LETM1-201ENST00000302787 KIF2AO00139 706 aaPredicted RBP24.6■■□□□ 1.53
LETM1-201ENST00000302787 UBXN4Q92575 508 aa24.6■■□□□ 1.53
LETM1-201ENST00000302787 HYPKQ9NX55 129 aa24.6■■□□□ 1.53
LETM1-201ENST00000302787 HDAC1Q13547 482 aaPredicted RBP24.6■■□□□ 1.53
LETM1-201ENST00000302787 TMEM132AQ24JP5 1023 aa24.6■■□□□ 1.53
LETM1-201ENST00000302787 BAG4O95429 457 aaKnown RBP24.59■■□□□ 1.53
LETM1-201ENST00000302787 CCDC191Q8NCU4 936 aa24.59■■□□□ 1.53
LETM1-201ENST00000302787 EVI5LQ96CN4 794 aa24.59■■□□□ 1.53
LETM1-201ENST00000302787 LARP6Q9BRS8 491 aaKnown RBP24.59■■□□□ 1.53
LETM1-201ENST00000302787 THOC2Q8NI27 1593 aaKnown RBP24.59■■□□□ 1.53
LETM1-201ENST00000302787 ARHGAP29Q52LW3 1261 aa24.59■■□□□ 1.53
LETM1-201ENST00000302787 USP25Q9UHP3 1055 aa24.59■■□□□ 1.53
LETM1-201ENST00000302787 TTC21BQ7Z4L5 1316 aa24.59■■□□□ 1.53
LETM1-201ENST00000302787 IQCEQ6IPM2 695 aa24.59■■□□□ 1.53
LETM1-201ENST00000302787 EIF5P55010 431 aaKnown RBP24.59■■□□□ 1.53
LETM1-201ENST00000302787 GUCY1B3Q02153 619 aa24.59■■□□□ 1.53
LETM1-201ENST00000302787 NUCB1Q02818 461 aa24.59■■□□□ 1.53
LETM1-201ENST00000302787 FBXO31Q5XUX0 539 aaPredicted RBP24.59■■□□□ 1.53
LETM1-201ENST00000302787 RALGAPBQ86X10 1494 aa24.58■■□□□ 1.53
LETM1-201ENST00000302787 FAM83GA6ND36 823 aa24.58■■□□□ 1.53
LETM1-201ENST00000302787 GDPD2Q9HCC8 539 aa24.58■■□□□ 1.53
LETM1-201ENST00000302787 ECHDC1Q9NTX5 307 aa24.58■■□□□ 1.53
LETM1-201ENST00000302787 CKAP2LQ8IYA6 745 aa24.58■■□□□ 1.52
LETM1-201ENST00000302787 CLIP2Q9UDT6 1046 aa24.58■■□□□ 1.52
LETM1-201ENST00000302787 GJB2P29033 226 aa24.57■■□□□ 1.52
LETM1-201ENST00000302787 CTAGE5O15320 804 aa24.56■■□□□ 1.52
LETM1-201ENST00000302787 PDCL3Q9H2J4 239 aa24.56■■□□□ 1.52
LETM1-201ENST00000302787 NUTM2BA6NNL0 878 aaPredicted RBP24.56■■□□□ 1.52
LETM1-201ENST00000302787 NUTM2EB1AL46 878 aaPredicted RBP24.56■■□□□ 1.52
Retrieved 100 of 20,778 RNA–protein pairs in 13.5 ms