RNA–Protein interactions for RNA: ENST00000302500.4

CLCC1-201, Transcript of chloride channel CLIC like 1, humanhuman

TSL 1 (best) BASIC

Gene CLCC1, Length 1,316 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCC1-201ENST00000302500 MTHFSDQ2M296 383 aaKnown RBP15.25■□□□□ 0.03
CLCC1-201ENST00000302500 RSPH6AQ9H0K4 717 aa15.25■□□□□ 0.03
CLCC1-201ENST00000302500 SPON1Q9HCB6 807 aa15.25■□□□□ 0.03
CLCC1-201ENST00000302500 DLG5Q8TDM6 1919 aa15.25■□□□□ 0.03
CLCC1-201ENST00000302500 LOC102724428A0A0B4J2F2 783 aa15.24■□□□□ 0.03
CLCC1-201ENST00000302500 SIK1P57059 783 aa15.24■□□□□ 0.03
CLCC1-201ENST00000302500 AKAP4Q5JQC9 854 aa15.24■□□□□ 0.03
CLCC1-201ENST00000302500 LINC00116Q8NCU8 138 aa15.24■□□□□ 0.03
CLCC1-201ENST00000302500 MTFR1LQ9H019 292 aa15.24■□□□□ 0.03
CLCC1-201ENST00000302500 ZBTB7AO95365 584 aa15.23■□□□□ 0.03
CLCC1-201ENST00000302500 HSP90AB1P08238 724 aaKnown RBP15.23■□□□□ 0.03
CLCC1-201ENST00000302500 SMARCC1Q92922 1105 aaPredicted RBP15.23■□□□□ 0.03
CLCC1-201ENST00000302500 LGR6Q9HBX8 967 aa15.23■□□□□ 0.03
CLCC1-201ENST00000302500 TMOD3Q9NYL9 352 aa15.23■□□□□ 0.03
CLCC1-201ENST00000302500 CEMIPQ8WUJ3 1361 aa15.23■□□□□ 0.03
CLCC1-201ENST00000302500 MAP3K5Q99683 1374 aa15.23■□□□□ 0.03
CLCC1-201ENST00000302500 COL23A1Q86Y22 540 aaPredicted RBP15.22■□□□□ 0.03
CLCC1-201ENST00000302500 PHACTR3Q96KR7 559 aa15.22■□□□□ 0.03
CLCC1-201ENST00000302500 KIAA1551Q9HCM1 1747 aa15.21■□□□□ 0.02
CLCC1-201ENST00000302500 RNMTO43148 476 aaKnown RBP15.2■□□□□ 0.02
CLCC1-201ENST00000302500 SLC16A10Q8TF71 515 aa15.2■□□□□ 0.02
CLCC1-201ENST00000302500 NFATC2IPQ8NCF5 419 aa15.19■□□□□ 0.02
CLCC1-201ENST00000302500 IL17REQ8NFR9 667 aa15.19■□□□□ 0.02
CLCC1-201ENST00000302500 SLC52A2Q9HAB3 445 aa15.19■□□□□ 0.02
CLCC1-201ENST00000302500 KIF13BQ9NQT8 1826 aa15.19■□□□□ 0.02
CLCC1-201ENST00000302500 SMIM5Q71RC9 77 aa15.18■□□□□ 0.02
CLCC1-201ENST00000302500 ATF5Q9Y2D1 282 aaPredicted RBP15.18■□□□□ 0.02
CLCC1-201ENST00000302500 CNGB1Q14028 1251 aaPredicted RBP15.17■□□□□ 0.02
CLCC1-201ENST00000302500 PLEKHF1Q96S99 279 aa15.17■□□□□ 0.02
CLCC1-201ENST00000302500 CNTNAP4Q9C0A0 1308 aa15.17■□□□□ 0.02
CLCC1-201ENST00000302500 C1orf141Q5JVX7 400 aa15.17■□□□□ 0.02
CLCC1-201ENST00000302500 TFCP2L1Q9NZI6 479 aa15.17■□□□□ 0.02
CLCC1-201ENST00000302500 KDM3BQ7LBC6 1761 aa15.16■□□□□ 0.02
CLCC1-201ENST00000302500 FCHSD2O94868 740 aa15.16■□□□□ 0.02
CLCC1-201ENST00000302500 PRKAR2BP31323 418 aa15.16■□□□□ 0.02
CLCC1-201ENST00000302500 CABP4P57796 275 aa15.16■□□□□ 0.02
CLCC1-201ENST00000302500 DDX10Q13206 875 aaKnown RBP15.16■□□□□ 0.02
CLCC1-201ENST00000302500 U2SURPO15042 1029 aaKnown RBP15.15■□□□□ 0.02
CLCC1-201ENST00000302500 SSFA2P28290 1259 aa15.15■□□□□ 0.02
CLCC1-201ENST00000302500 ATP6V1AP38606 617 aa15.15■□□□□ 0.02
CLCC1-201ENST00000302500 RC3H1Q5TC82 1133 aaKnown RBP15.15■□□□□ 0.02
CLCC1-201ENST00000302500 SYT17Q9BSW7 474 aa15.14■□□□□ 0.01
CLCC1-201ENST00000302500 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP15.13■□□□□ 0.01
CLCC1-201ENST00000302500 RALBP1Q15311 655 aa15.13■□□□□ 0.01
CLCC1-201ENST00000302500 GAS2L2Q8NHY3 880 aa15.13■□□□□ 0.01
CLCC1-201ENST00000302500 CFAP53Q96M91 514 aa15.13■□□□□ 0.01
CLCC1-201ENST00000302500 FHDC1Q9C0D6 1143 aaPredicted RBP15.13■□□□□ 0.01
CLCC1-201ENST00000302500 GNAT3A8MTJ3 354 aa15.12■□□□□ 0.01
CLCC1-201ENST00000302500 SLC39A6Q13433 755 aa15.12■□□□□ 0.01
CLCC1-201ENST00000302500 INTS5Q6P9B9 1019 aaKnown RBP15.12■□□□□ 0.01
CLCC1-201ENST00000302500 ARXQ96QS3 562 aa15.12■□□□□ 0.01
CLCC1-201ENST00000302500 BRCA1P38398 1863 aaKnown RBP15.12■□□□□ 0.01
CLCC1-201ENST00000302500 NRXN2Q9P2S2 1712 aa15.11■□□□□ 0.01
CLCC1-201ENST00000302500 FLAD1Q8NFF5 587 aa15.11■□□□□ 0.01
CLCC1-201ENST00000302500 PTCD1O75127 700 aaKnown RBP15.1■□□□□ 0.01
CLCC1-201ENST00000302500 U2AF1L5P0DN76 240 aaPredicted RBP15.1■□□□□ 0.01
CLCC1-201ENST00000302500 U2AF1Q01081 240 aaKnown RBP eCLIP15.1■□□□□ 0.01
CLCC1-201ENST00000302500 PRKRIP1Q9H875 184 aaPredicted RBP15.1■□□□□ 0.01
CLCC1-201ENST00000302500 MYBBP1AQ9BQG0 1328 aaKnown RBP15.09■□□□□ 0.01
CLCC1-201ENST00000302500 LAMB4A4D0S4 1761 aa15.09■□□□□ 0.01
CLCC1-201ENST00000302500 SCN7AQ01118 1682 aa15.09■□□□□ 0.01
CLCC1-201ENST00000302500 GNPATO15228 680 aa15.09■□□□□ 0.01
CLCC1-201ENST00000302500 RPS6KA4O75676 772 aa15.09■□□□□ 0.01
CLCC1-201ENST00000302500 CYP19A1P11511 503 aaPredicted RBP15.09■□□□□ 0.01
CLCC1-201ENST00000302500 HMGB2P26583 209 aaKnown RBP15.09■□□□□ 0.01
CLCC1-201ENST00000302500 CRKLP46109 303 aaKnown RBP15.09■□□□□ 0.01
CLCC1-201ENST00000302500 VSIG10Q8N0Z9 540 aa15.09■□□□□ 0.01
CLCC1-201ENST00000302500 AK7Q96M32 723 aa15.09■□□□□ 0.01
CLCC1-201ENST00000302500 HEG1Q9ULI3 1381 aa15.08■□□□□ 0
CLCC1-201ENST00000302500 DNAJC10Q8IXB1 793 aa15.08■□□□□ 0
CLCC1-201ENST00000302500 RBM42Q9BTD8 480 aaKnown RBP15.08■□□□□ 0
CLCC1-201ENST00000302500 NUDCQ9Y266 331 aa15.08■□□□□ 0
CLCC1-201ENST00000302500 BCORQ6W2J9 1755 aa15.08■□□□□ 0
CLCC1-201ENST00000302500 KCNQ3O43525 872 aa15.07■□□□□ 0
CLCC1-201ENST00000302500 HTATSF1O43719 755 aaKnown RBP15.07■□□□□ 0
CLCC1-201ENST00000302500 ZEB1P37275 1124 aaPredicted RBP15.07■□□□□ 0
CLCC1-201ENST00000302500 MSL1Q68DK7 614 aa15.07■□□□□ 0
CLCC1-201ENST00000302500 ZNF790Q6PG37 636 aa15.07■□□□□ 0
CLCC1-201ENST00000302500 ARHGEF1Q92888 912 aaKnown RBP15.07■□□□□ 0
CLCC1-201ENST00000302500 ZNF496Q96IT1 587 aaPredicted RBP15.07■□□□□ 0
CLCC1-201ENST00000302500 AFDNP55196 1824 aaKnown RBP15.07■□□□□ 0
CLCC1-201ENST00000302500 SOS1Q07889 1333 aaPredicted RBP15.07■□□□□ 0
CLCC1-201ENST00000302500 CHD4Q14839 1912 aa15.06■□□□□ 0
CLCC1-201ENST00000302500 PHF14O94880 888 aa15.06■□□□□ 0
CLCC1-201ENST00000302500 GYS1P13807 737 aa15.06■□□□□ 0
CLCC1-201ENST00000302500 NLGN2Q8NFZ4 835 aa15.06■□□□□ 0
CLCC1-201ENST00000302500 PPP1R1BQ9UD71 204 aaPredicted RBP15.05■□□□□ -0
CLCC1-201ENST00000302500 C10orf71Q711Q0 1435 aa15.04■□□□□ -0
CLCC1-201ENST00000302500 DCTN1Q14203 1278 aa15.04■□□□□ -0
CLCC1-201ENST00000302500 MCM10Q7L590 875 aa15.04■□□□□ -0
CLCC1-201ENST00000302500 RTCBQ9Y3I0 505 aaKnown RBP15.04■□□□□ -0
CLCC1-201ENST00000302500 USP42Q9H9J4 1324 aaKnown RBP15.04■□□□□ -0
CLCC1-201ENST00000302500 BCL2L12Q9HB09 334 aa15.03■□□□□ -0
CLCC1-201ENST00000302500 CCDC87Q9NVE4 849 aa15.03■□□□□ -0
CLCC1-201ENST00000302500 ZBTB1Q9Y2K1 713 aa15.03■□□□□ -0
CLCC1-201ENST00000302500 N4BP2Q86UW6 1770 aaPredicted RBP15.03■□□□□ -0
CLCC1-201ENST00000302500 NFE2L2Q16236 605 aa15.02■□□□□ -0
CLCC1-201ENST00000302500 PXDNLA1KZ92 1463 aa15.01□□□□□ -0.01
CLCC1-201ENST00000302500 DLEC1Q9Y238 1755 aa15.01□□□□□ -0.01
CLCC1-201ENST00000302500 POLD1P28340 1107 aa15.01□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 54.7 ms