RNA–Protein interactions for RNA: ENST00000302278.7

ITGB1-201, Transcript of integrin subunit beta 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene ITGB1, Length 3,640 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGB1-201ENST00000302278 RAPGEF4Q8WZA2 1011 aa9.17□□□□□ -0.94
ITGB1-201ENST00000302278 SYTL4Q96C24 671 aaPredicted RBP9.17□□□□□ -0.94
ITGB1-201ENST00000302278 CNTNAP4Q9C0A0 1308 aa9.17□□□□□ -0.94
ITGB1-201ENST00000302278 ZC3H4Q9UPT8 1303 aaKnown RBP9.17□□□□□ -0.94
ITGB1-201ENST00000302278 RC3H1Q5TC82 1133 aaKnown RBP9.17□□□□□ -0.94
ITGB1-201ENST00000302278 PIGBQ92521 554 aa9.17□□□□□ -0.94
ITGB1-201ENST00000302278 AK7Q96M32 723 aa9.17□□□□□ -0.94
ITGB1-201ENST00000302278 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP9.16□□□□□ -0.94
ITGB1-201ENST00000302278 TMC1Q8TDI8 760 aa9.16□□□□□ -0.94
ITGB1-201ENST00000302278 LOC102724428A0A0B4J2F2 783 aa9.15□□□□□ -0.94
ITGB1-201ENST00000302278 SIK1P57059 783 aa9.15□□□□□ -0.94
ITGB1-201ENST00000302278 SCN7AQ01118 1682 aa9.15□□□□□ -0.94
ITGB1-201ENST00000302278 FER1L6Q2WGJ9 1857 aa9.15□□□□□ -0.94
ITGB1-201ENST00000302278 WASHC2AQ641Q2 1341 aa9.15□□□□□ -0.94
ITGB1-201ENST00000302278 ITPK1Q13572 414 aa9.14□□□□□ -0.95
ITGB1-201ENST00000302278 LTV1Q96GA3 475 aaPredicted RBP9.14□□□□□ -0.95
ITGB1-201ENST00000302278 KCNA3P22001 575 aa9.14□□□□□ -0.95
ITGB1-201ENST00000302278 KLRG1Q96E93 195 aa9.14□□□□□ -0.95
ITGB1-201ENST00000302278 CCDC88AQ3V6T2 1871 aa9.14□□□□□ -0.95
ITGB1-201ENST00000302278 DCAF5Q96JK2 942 aa9.14□□□□□ -0.95
ITGB1-201ENST00000302278 SIPA1L3O60292 1781 aaPredicted RBP9.14□□□□□ -0.95
ITGB1-201ENST00000302278 THSD7BQ9C0I4 1608 aa9.13□□□□□ -0.95
ITGB1-201ENST00000302278 ANKRD31Q8N7Z5 1873 aa9.13□□□□□ -0.95
ITGB1-201ENST00000302278 RRS1Q15050 365 aaKnown RBP9.13□□□□□ -0.95
ITGB1-201ENST00000302278 HSP90AB2PQ58FF8 381 aa9.13□□□□□ -0.95
ITGB1-201ENST00000302278 SPG7Q9UQ90 795 aa9.13□□□□□ -0.95
ITGB1-201ENST00000302278 BCORQ6W2J9 1755 aa9.13□□□□□ -0.95
ITGB1-201ENST00000302278 MSH5O43196 834 aa9.12□□□□□ -0.95
ITGB1-201ENST00000302278 PHKG2P15735 406 aa9.12□□□□□ -0.95
ITGB1-201ENST00000302278 NLGN1Q8N2Q7 840 aa9.12□□□□□ -0.95
ITGB1-201ENST00000302278 USHBP1Q8N6Y0 703 aa9.12□□□□□ -0.95
ITGB1-201ENST00000302278 ATG3Q9NT62 314 aa9.12□□□□□ -0.95
ITGB1-201ENST00000302278 KCPQ6ZWJ8 1503 aa9.12□□□□□ -0.95
ITGB1-201ENST00000302278 ADAMTSL1Q8N6G6 1762 aa9.12□□□□□ -0.95
ITGB1-201ENST00000302278 MPRIPQ6WCQ1 1025 aa9.12□□□□□ -0.95
ITGB1-201ENST00000302278 ERVV-2B6SEH9 535 aa9.11□□□□□ -0.95
ITGB1-201ENST00000302278 FBLN1P23142 703 aa9.11□□□□□ -0.95
ITGB1-201ENST00000302278 COL11A2P13942 1736 aaPredicted RBP9.11□□□□□ -0.95
ITGB1-201ENST00000302278 ST20-MTHFSA0A0A6YYL1 179 aa9.11□□□□□ -0.95
ITGB1-201ENST00000302278 MMP10P09238 476 aa9.11□□□□□ -0.95
ITGB1-201ENST00000302278 GYS1P13807 737 aa9.11□□□□□ -0.95
ITGB1-201ENST00000302278 SLC4A9Q96Q91 983 aa9.11□□□□□ -0.95
ITGB1-201ENST00000302278 PRELPP51888 382 aa9.1□□□□□ -0.95
ITGB1-201ENST00000302278 IFNL2Q8IZJ0 200 aa9.1□□□□□ -0.95
ITGB1-201ENST00000302278 CCDC87Q9NVE4 849 aa9.1□□□□□ -0.95
ITGB1-201ENST00000302278 RPS6KA4O75676 772 aa9.1□□□□□ -0.95
ITGB1-201ENST00000302278 TMOD3Q9NYL9 352 aa9.1□□□□□ -0.95
ITGB1-201ENST00000302278 SCN4AP35499 1836 aa9.09□□□□□ -0.95
ITGB1-201ENST00000302278 GNPATO15228 680 aa9.09□□□□□ -0.95
ITGB1-201ENST00000302278 TMF1P82094 1093 aa9.09□□□□□ -0.95
ITGB1-201ENST00000302278 GGNBP2Q9H3C7 697 aa9.09□□□□□ -0.95
ITGB1-201ENST00000302278 CARD14Q9BXL6 1004 aa9.09□□□□□ -0.95
ITGB1-201ENST00000302278 ASAP1Q9ULH1 1129 aa9.09□□□□□ -0.95
ITGB1-201ENST00000302278 CDCA8Q53HL2 280 aa9.09□□□□□ -0.96
ITGB1-201ENST00000302278 NMRK2Q9NPI5 230 aa9.09□□□□□ -0.96
ITGB1-201ENST00000302278 KDM2BQ8NHM5 1336 aa9.08□□□□□ -0.96
ITGB1-201ENST00000302278 DPEP1P16444 411 aa9.08□□□□□ -0.96
ITGB1-201ENST00000302278 ATP6V1AP38606 617 aa9.08□□□□□ -0.96
ITGB1-201ENST00000302278 ZNF526Q8TF50 670 aaPredicted RBP9.08□□□□□ -0.96
ITGB1-201ENST00000302278 EYA1Q99502 592 aa9.08□□□□□ -0.96
ITGB1-201ENST00000302278 PHF14O94880 888 aa9.08□□□□□ -0.96
ITGB1-201ENST00000302278 TRAPPC3LQ5T215 181 aa9.08□□□□□ -0.96
ITGB1-201ENST00000302278 ARHGEF1Q92888 912 aaKnown RBP9.08□□□□□ -0.96
ITGB1-201ENST00000302278 RTCBQ9Y3I0 505 aaKnown RBP9.08□□□□□ -0.96
ITGB1-201ENST00000302278 USP42Q9H9J4 1324 aaKnown RBP9.08□□□□□ -0.96
ITGB1-201ENST00000302278 HSP90AB1P08238 724 aaKnown RBP9.07□□□□□ -0.96
ITGB1-201ENST00000302278 TM4SF1P30408 202 aa9.07□□□□□ -0.96
ITGB1-201ENST00000302278 NEUROD1Q13562 356 aa9.07□□□□□ -0.96
ITGB1-201ENST00000302278 EMILIN1Q9Y6C2 1016 aa9.07□□□□□ -0.96
ITGB1-201ENST00000302278 A0A0G2JLW4 131 aa9.06□□□□□ -0.96
ITGB1-201ENST00000302278 C9orf131Q5VYM1 1079 aa9.06□□□□□ -0.96
ITGB1-201ENST00000302278 COL13A1Q5TAT6 717 aaPredicted RBP9.06□□□□□ -0.96
ITGB1-201ENST00000302278 SMC1BQ8NDV3 1235 aa9.06□□□□□ -0.96
ITGB1-201ENST00000302278 PIM2Q9P1W9 311 aa9.06□□□□□ -0.96
ITGB1-201ENST00000302278 SMIM5Q71RC9 77 aa9.06□□□□□ -0.96
ITGB1-201ENST00000302278 POLKQ9UBT6 870 aa9.06□□□□□ -0.96
ITGB1-201ENST00000302278 PARP3Q9Y6F1 533 aa9.05□□□□□ -0.96
ITGB1-201ENST00000302278 POLRMTO00411 1230 aaKnown RBP9.05□□□□□ -0.96
ITGB1-201ENST00000302278 DDR1Q08345 913 aa9.05□□□□□ -0.96
ITGB1-201ENST00000302278 BCS1LQ9Y276 419 aa9.05□□□□□ -0.96
ITGB1-201ENST00000302278 EIF4A2Q14240 407 aaKnown RBP9.04□□□□□ -0.96
ITGB1-201ENST00000302278 DALRD3Q5D0E6 543 aaKnown RBP9.04□□□□□ -0.96
ITGB1-201ENST00000302278 ARHGAP27Q6ZUM4 889 aa9.04□□□□□ -0.96
ITGB1-201ENST00000302278 FCHSD2O94868 740 aa9.04□□□□□ -0.96
ITGB1-201ENST00000302278 AMOTQ4VCS5 1084 aa9.03□□□□□ -0.96
ITGB1-201ENST00000302278 CACNA1SQ13698 1873 aa9.03□□□□□ -0.96
ITGB1-201ENST00000302278 LTBP3Q9NS15 1303 aa9.03□□□□□ -0.96
ITGB1-201ENST00000302278 INTS5Q6P9B9 1019 aaKnown RBP9.03□□□□□ -0.96
ITGB1-201ENST00000302278 SOS1Q07889 1333 aaPredicted RBP9.03□□□□□ -0.96
ITGB1-201ENST00000302278 RFC4P35249 363 aa9.02□□□□□ -0.97
ITGB1-201ENST00000302278 GLTPD2A6NH11 291 aa9.02□□□□□ -0.97
ITGB1-201ENST00000302278 C16orf71Q8IYS4 520 aaPredicted RBP9.02□□□□□ -0.97
ITGB1-201ENST00000302278 CRKLP46109 303 aaKnown RBP9.01□□□□□ -0.97
ITGB1-201ENST00000302278 POTECB2RU33 542 aa9.01□□□□□ -0.97
ITGB1-201ENST00000302278 PDZRN3Q9UPQ7 1066 aa9.01□□□□□ -0.97
ITGB1-201ENST00000302278 LMNB1P20700 586 aa9□□□□□ -0.97
ITGB1-201ENST00000302278 FKBP8Q14318 412 aa9□□□□□ -0.97
ITGB1-201ENST00000302278 RRAGCQ9HB90 399 aa9□□□□□ -0.97
ITGB1-201ENST00000302278 RNF181Q9P0P0 153 aa9□□□□□ -0.97
ITGB1-201ENST00000302278 PLEKHO1Q53GL0 409 aaPredicted RBP9□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 13.7 ms