RNA–Protein interactions for RNA: ENST00000301935.9

UBXN1-202, Transcript of UBX domain protein 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene UBXN1, Length 1,153 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBXN1-202ENST00000301935 PIGBQ92521 554 aa20.21■□□□□ 0.83
UBXN1-202ENST00000301935 CFAP53Q96M91 514 aa20.21■□□□□ 0.83
UBXN1-202ENST00000301935 SPG7Q9UQ90 795 aa20.21■□□□□ 0.83
UBXN1-202ENST00000301935 PHF14O94880 888 aa20.19■□□□□ 0.82
UBXN1-202ENST00000301935 EYA1Q99502 592 aa20.19■□□□□ 0.82
UBXN1-202ENST00000301935 ATP10DQ9P241 1426 aa20.19■□□□□ 0.82
UBXN1-202ENST00000301935 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP20.18■□□□□ 0.82
UBXN1-202ENST00000301935 MTHFSP49914 203 aa20.18■□□□□ 0.82
UBXN1-202ENST00000301935 MRS2Q9HD23 443 aa20.18■□□□□ 0.82
UBXN1-202ENST00000301935 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP20.18■□□□□ 0.82
UBXN1-202ENST00000301935 POLKQ9UBT6 870 aa20.18■□□□□ 0.82
UBXN1-202ENST00000301935 LOC102724428A0A0B4J2F2 783 aa20.17■□□□□ 0.82
UBXN1-202ENST00000301935 SSFA2P28290 1259 aa20.17■□□□□ 0.82
UBXN1-202ENST00000301935 SIK1P57059 783 aa20.17■□□□□ 0.82
UBXN1-202ENST00000301935 LINC00116Q8NCU8 138 aa20.17■□□□□ 0.82
UBXN1-202ENST00000301935 TMOD3Q9NYL9 352 aa20.17■□□□□ 0.82
UBXN1-202ENST00000301935 PLEKHG2Q9H7P9 1386 aa20.17■□□□□ 0.82
UBXN1-202ENST00000301935 ADCY9O60503 1353 aa20.16■□□□□ 0.82
UBXN1-202ENST00000301935 PHKG2P15735 406 aa20.15■□□□□ 0.82
UBXN1-202ENST00000301935 SMIM5Q71RC9 77 aa20.15■□□□□ 0.82
UBXN1-202ENST00000301935 IFNL2Q8IZJ0 200 aa20.15■□□□□ 0.82
UBXN1-202ENST00000301935 ZNF831Q5JPB2 1677 aa20.15■□□□□ 0.82
UBXN1-202ENST00000301935 IGSF1Q8N6C5 1336 aa20.14■□□□□ 0.81
UBXN1-202ENST00000301935 COL5A3P25940 1745 aaPredicted RBP20.13■□□□□ 0.81
UBXN1-202ENST00000301935 KDRP35968 1356 aa20.13■□□□□ 0.81
UBXN1-202ENST00000301935 ITPK1Q13572 414 aa20.13■□□□□ 0.81
UBXN1-202ENST00000301935 ASAP1Q9ULH1 1129 aa20.13■□□□□ 0.81
UBXN1-202ENST00000301935 KIF13BQ9NQT8 1826 aa20.13■□□□□ 0.81
UBXN1-202ENST00000301935 GNPATO15228 680 aa20.12■□□□□ 0.81
UBXN1-202ENST00000301935 EIF4A2Q14240 407 aaKnown RBP20.12■□□□□ 0.81
UBXN1-202ENST00000301935 KIAA1551Q9HCM1 1747 aa20.12■□□□□ 0.81
UBXN1-202ENST00000301935 CICQ96RK0 1608 aaPredicted RBP20.12■□□□□ 0.81
UBXN1-202ENST00000301935 ATP6V1AP38606 617 aa20.11■□□□□ 0.81
UBXN1-202ENST00000301935 NUDCQ9Y266 331 aa20.11■□□□□ 0.81
UBXN1-202ENST00000301935 ATG3Q9NT62 314 aa20.1■□□□□ 0.81
UBXN1-202ENST00000301935 GPBP1L1Q9HC44 474 aaPredicted RBP20.09■□□□□ 0.81
UBXN1-202ENST00000301935 CEP350Q5VT06 3117 aa20.08■□□□□ 0.81
UBXN1-202ENST00000301935 DIAPH1O60610 1272 aaKnown RBP20.08■□□□□ 0.81
UBXN1-202ENST00000301935 PNISRQ8TF01 805 aaKnown RBP20.08■□□□□ 0.81
UBXN1-202ENST00000301935 WWC3Q9ULE0 1092 aa20.08■□□□□ 0.81
UBXN1-202ENST00000301935 WDR43Q15061 677 aaKnown RBP eCLIP20.07■□□□□ 0.8
UBXN1-202ENST00000301935 CCDC184Q52MB2 194 aa20.07■□□□□ 0.8
UBXN1-202ENST00000301935 C4AP0C0L4 1744 aa20.07■□□□□ 0.8
UBXN1-202ENST00000301935 PXDNLA1KZ92 1463 aa20.06■□□□□ 0.8
UBXN1-202ENST00000301935 N4BP2Q86UW6 1770 aaPredicted RBP20.06■□□□□ 0.8
UBXN1-202ENST00000301935 KDM6AO15550 1401 aaPredicted RBP20.05■□□□□ 0.8
UBXN1-202ENST00000301935 ERVV-2B6SEH9 535 aa20.04■□□□□ 0.8
UBXN1-202ENST00000301935 MMP10P09238 476 aa20.04■□□□□ 0.8
UBXN1-202ENST00000301935 SLC4A9Q96Q91 983 aa20.04■□□□□ 0.8
UBXN1-202ENST00000301935 C10orf71Q711Q0 1435 aa20.03■□□□□ 0.8
UBXN1-202ENST00000301935 HSP90AB1P08238 724 aaKnown RBP20.03■□□□□ 0.8
UBXN1-202ENST00000301935 ZNF526Q8TF50 670 aaPredicted RBP20.03■□□□□ 0.8
UBXN1-202ENST00000301935 DCAF5Q96JK2 942 aa20.03■□□□□ 0.8
UBXN1-202ENST00000301935 PNNQ9H307 717 aaKnown RBP20.03■□□□□ 0.8
UBXN1-202ENST00000301935 RTCBQ9Y3I0 505 aaKnown RBP20.03■□□□□ 0.8
UBXN1-202ENST00000301935 BRCA1P38398 1863 aaKnown RBP20.03■□□□□ 0.8
UBXN1-202ENST00000301935 COL3A1P02461 1466 aaPredicted RBP20.02■□□□□ 0.8
UBXN1-202ENST00000301935 CNTNAP4Q9C0A0 1308 aa20.02■□□□□ 0.79
UBXN1-202ENST00000301935 MYH14Q7Z406 1995 aaKnown RBP20.01■□□□□ 0.79
UBXN1-202ENST00000301935 ADRA2BP18089 450 aa20.01■□□□□ 0.79
UBXN1-202ENST00000301935 IL13P35225 146 aa20.01■□□□□ 0.79
UBXN1-202ENST00000301935 PLEKHO1Q53GL0 409 aaPredicted RBP20.01■□□□□ 0.79
UBXN1-202ENST00000301935 TRAPPC3LQ5T215 181 aa20.01■□□□□ 0.79
UBXN1-202ENST00000301935 FAM9BQ8IZU0 186 aa20.01■□□□□ 0.79
UBXN1-202ENST00000301935 RBM42Q9BTD8 480 aaKnown RBP20.01■□□□□ 0.79
UBXN1-202ENST00000301935 TJP1Q07157 1748 aa20.01■□□□□ 0.79
UBXN1-202ENST00000301935 RC3H1Q5TC82 1133 aaKnown RBP20■□□□□ 0.79
UBXN1-202ENST00000301935 ZNF530Q6P9A1 599 aaPredicted RBP20■□□□□ 0.79
UBXN1-202ENST00000301935 NLGN1Q8N2Q7 840 aa20■□□□□ 0.79
UBXN1-202ENST00000301935 SCN11AQ9UI33 1791 aa19.99■□□□□ 0.79
UBXN1-202ENST00000301935 AMOTQ4VCS5 1084 aa19.99■□□□□ 0.79
UBXN1-202ENST00000301935 CABP4P57796 275 aa19.98■□□□□ 0.79
UBXN1-202ENST00000301935 TGFB2P61812 414 aa19.98■□□□□ 0.79
UBXN1-202ENST00000301935 ARHGEF1Q92888 912 aaKnown RBP19.98■□□□□ 0.79
UBXN1-202ENST00000301935 U2SURPO15042 1029 aaKnown RBP19.97■□□□□ 0.79
UBXN1-202ENST00000301935 FCHSD2O94868 740 aa19.97■□□□□ 0.79
UBXN1-202ENST00000301935 U2AF1L5P0DN76 240 aaPredicted RBP19.97■□□□□ 0.79
UBXN1-202ENST00000301935 GYS1P13807 737 aa19.97■□□□□ 0.79
UBXN1-202ENST00000301935 HSPA6P17066 643 aa19.97■□□□□ 0.79
UBXN1-202ENST00000301935 U2AF1Q01081 240 aaKnown RBP eCLIP19.97■□□□□ 0.79
UBXN1-202ENST00000301935 AEBP1Q8IUX7 1158 aa19.97■□□□□ 0.79
UBXN1-202ENST00000301935 ADAMTS8Q9UP79 889 aa19.97■□□□□ 0.79
UBXN1-202ENST00000301935 RPS6KA4O75676 772 aa19.96■□□□□ 0.79
UBXN1-202ENST00000301935 CCDC87Q9NVE4 849 aa19.96■□□□□ 0.79
UBXN1-202ENST00000301935 ARFGEF1Q9Y6D6 1849 aa19.96■□□□□ 0.79
UBXN1-202ENST00000301935 KIF3CO14782 793 aa19.95■□□□□ 0.78
UBXN1-202ENST00000301935 RFC4P35249 363 aa19.95■□□□□ 0.78
UBXN1-202ENST00000301935 BCS1LQ9Y276 419 aa19.95■□□□□ 0.78
UBXN1-202ENST00000301935 ADAMTS7Q9UKP4 1686 aa19.94■□□□□ 0.78
UBXN1-202ENST00000301935 C1orf141Q5JVX7 400 aa19.94■□□□□ 0.78
UBXN1-202ENST00000301935 VIRMAQ69YN4 1812 aaKnown RBP19.94■□□□□ 0.78
UBXN1-202ENST00000301935 A0A0G2JLW4 131 aa19.93■□□□□ 0.78
UBXN1-202ENST00000301935 NEFMP07197 916 aa19.93■□□□□ 0.78
UBXN1-202ENST00000301935 PARP3Q9Y6F1 533 aa19.93■□□□□ 0.78
UBXN1-202ENST00000301935 PTCD1O75127 700 aaKnown RBP19.92■□□□□ 0.78
UBXN1-202ENST00000301935 NGEFQ8N5V2 710 aa19.92■□□□□ 0.78
UBXN1-202ENST00000301935 DPEP1P16444 411 aa19.91■□□□□ 0.78
UBXN1-202ENST00000301935 CRKLP46109 303 aaKnown RBP19.91■□□□□ 0.78
UBXN1-202ENST00000301935 SULT6B1Q6IMI4 303 aa19.91■□□□□ 0.78
UBXN1-202ENST00000301935 NFATC2IPQ8NCF5 419 aa19.91■□□□□ 0.78
Retrieved 100 of 20,778 RNA–protein pairs in 10 ms