RNA–Protein interactions for RNA: ENST00000301364.9

TSR1-201, Transcript of TSR1, ribosome maturation factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TSR1, Length 5,188 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSR1-201ENST00000301364 AK7Q96M32 723 aa22.79■■□□□ 1.24
TSR1-201ENST00000301364 RRP12Q5JTH9 1297 aaKnown RBP22.78■■□□□ 1.24
TSR1-201ENST00000301364 SLC3A2P08195 630 aaKnown RBP22.78■■□□□ 1.24
TSR1-201ENST00000301364 RUFY1Q96T51 708 aa22.78■■□□□ 1.24
TSR1-201ENST00000301364 RBM42Q9BTD8 480 aaKnown RBP22.78■■□□□ 1.24
TSR1-201ENST00000301364 KIAA0556O60303 1618 aa22.78■■□□□ 1.24
TSR1-201ENST00000301364 FBXO31Q5XUX0 539 aaPredicted RBP22.78■■□□□ 1.24
TSR1-201ENST00000301364 KDM4AO75164 1064 aa22.77■■□□□ 1.24
TSR1-201ENST00000301364 FKBP4Q02790 459 aaKnown RBP eCLIP22.77■■□□□ 1.24
TSR1-201ENST00000301364 BCL11BQ9C0K0 894 aaPredicted RBP22.77■■□□□ 1.24
TSR1-201ENST00000301364 RNF123Q5XPI4 1314 aa22.77■■□□□ 1.24
TSR1-201ENST00000301364 DENND4BO75064 1496 aaPredicted RBP22.77■■□□□ 1.24
TSR1-201ENST00000301364 COL17A1Q9UMD9 1497 aaPredicted RBP22.77■■□□□ 1.24
TSR1-201ENST00000301364 RAD21O60216 631 aa22.77■■□□□ 1.24
TSR1-201ENST00000301364 CCDC66A2RUB6 948 aa22.77■■□□□ 1.23
TSR1-201ENST00000301364 FERMT3Q86UX7 667 aa22.77■■□□□ 1.23
TSR1-201ENST00000301364 DNMT1P26358 1616 aaKnown RBP22.76■■□□□ 1.23
TSR1-201ENST00000301364 GNL3LQ9NVN8 582 aaKnown RBP22.76■■□□□ 1.23
TSR1-201ENST00000301364 MCM5P33992 734 aa22.76■■□□□ 1.23
TSR1-201ENST00000301364 INSRP06213 1382 aa22.76■■□□□ 1.23
TSR1-201ENST00000301364 DBF4Q9UBU7 674 aaPredicted RBP22.76■■□□□ 1.23
TSR1-201ENST00000301364 U3KPZ7 1027 aaPredicted RBP22.76■■□□□ 1.23
TSR1-201ENST00000301364 NPC1L1Q9UHC9 1359 aa22.75■■□□□ 1.23
TSR1-201ENST00000301364 TEX14Q8IWB6 1497 aa22.75■■□□□ 1.23
TSR1-201ENST00000301364 NAP1L1P55209 391 aaKnown RBP22.75■■□□□ 1.23
TSR1-201ENST00000301364 CCDC69A6NI79 296 aa22.75■■□□□ 1.23
TSR1-201ENST00000301364 SMTNL1A8MU46 457 aa22.74■■□□□ 1.23
TSR1-201ENST00000301364 PDE4CQ08493 712 aa22.74■■□□□ 1.23
TSR1-201ENST00000301364 ANKRD44Q8N8A2 993 aa22.74■■□□□ 1.23
TSR1-201ENST00000301364 IMMTQ16891 758 aaKnown RBP22.73■■□□□ 1.23
TSR1-201ENST00000301364 TOM1L2Q6ZVM7 507 aa22.73■■□□□ 1.23
TSR1-201ENST00000301364 FAM83GA6ND36 823 aa22.73■■□□□ 1.23
TSR1-201ENST00000301364 HMGB1P09429 215 aaKnown RBP22.73■■□□□ 1.23
TSR1-201ENST00000301364 FILIP1Q7Z7B0 1213 aa22.73■■□□□ 1.23
TSR1-201ENST00000301364 BOLA2Q9H3K6 86 aa22.73■■□□□ 1.23
TSR1-201ENST00000301364 ECHDC1Q9NTX5 307 aa22.73■■□□□ 1.23
TSR1-201ENST00000301364 DDX11Q96FC9 970 aa22.73■■□□□ 1.23
TSR1-201ENST00000301364 MRPL50Q8N5N7 158 aaKnown RBP22.73■■□□□ 1.23
TSR1-201ENST00000301364 ADAMTS12P58397 1594 aa22.72■■□□□ 1.23
TSR1-201ENST00000301364 PPFIBP1Q86W92 1011 aa22.72■■□□□ 1.23
TSR1-201ENST00000301364 SMC5Q8IY18 1101 aa22.72■■□□□ 1.23
TSR1-201ENST00000301364 EVI5LQ96CN4 794 aa22.72■■□□□ 1.23
TSR1-201ENST00000301364 MAGEC2Q9UBF1 373 aaPredicted RBP22.72■■□□□ 1.23
TSR1-201ENST00000301364 HYPKQ9NX55 129 aa22.72■■□□□ 1.23
TSR1-201ENST00000301364 RLBP1P12271 317 aa22.71■■□□□ 1.23
TSR1-201ENST00000301364 SDSP20132 328 aa22.71■■□□□ 1.23
TSR1-201ENST00000301364 NOM1Q5C9Z4 860 aaKnown RBP22.71■■□□□ 1.23
TSR1-201ENST00000301364 CWC15Q9P013 229 aaKnown RBP22.71■■□□□ 1.23
TSR1-201ENST00000301364 ADGRL2O95490 1459 aa22.71■■□□□ 1.23
TSR1-201ENST00000301364 CDR1P51861 262 aa22.71■■□□□ 1.23
TSR1-201ENST00000301364 CAGE1Q8TC20 777 aa22.71■■□□□ 1.23
TSR1-201ENST00000301364 CARD14Q9BXL6 1004 aa22.71■■□□□ 1.23
TSR1-201ENST00000301364 KIF2AO00139 706 aaPredicted RBP22.71■■□□□ 1.23
TSR1-201ENST00000301364 PIK3R4Q99570 1358 aa22.7■■□□□ 1.22
TSR1-201ENST00000301364 OFD1O75665 1012 aa22.7■■□□□ 1.22
TSR1-201ENST00000301364 WASF1Q92558 559 aa22.7■■□□□ 1.22
TSR1-201ENST00000301364 CAMK4Q16566 473 aa22.7■■□□□ 1.22
TSR1-201ENST00000301364 STX6O43752 255 aa22.7■■□□□ 1.22
TSR1-201ENST00000301364 FAM177BA6PVY3 158 aa22.69■■□□□ 1.22
TSR1-201ENST00000301364 ANO10Q9NW15 660 aa22.69■■□□□ 1.22
TSR1-201ENST00000301364 TCEAL9Q9UHQ7 104 aa22.69■■□□□ 1.22
TSR1-201ENST00000301364 AMOTL2Q9Y2J4 779 aa22.69■■□□□ 1.22
TSR1-201ENST00000301364 ANAPC15P60006 121 aa22.69■■□□□ 1.22
TSR1-201ENST00000301364 DDX54Q8TDD1 881 aaKnown RBP22.69■■□□□ 1.22
TSR1-201ENST00000301364 MPHOSPH8Q99549 860 aa22.69■■□□□ 1.22
TSR1-201ENST00000301364 AKAP2Q9Y2D5 859 aa22.69■■□□□ 1.22
TSR1-201ENST00000301364 BRPF1P55201 1214 aaPredicted RBP22.69■■□□□ 1.22
TSR1-201ENST00000301364 STRN4Q9NRL3 753 aa22.69■■□□□ 1.22
TSR1-201ENST00000301364 DDX19AQ9NUU7 478 aaKnown RBP22.69■■□□□ 1.22
TSR1-201ENST00000301364 NOL7Q9UMY1 257 aaKnown RBP22.69■■□□□ 1.22
TSR1-201ENST00000301364 CTAGE5O15320 804 aa22.68■■□□□ 1.22
TSR1-201ENST00000301364 UVSSAQ2YD98 709 aa22.68■■□□□ 1.22
TSR1-201ENST00000301364 TTLL5Q6EMB2 1281 aa22.68■■□□□ 1.22
TSR1-201ENST00000301364 PDCL2Q8N4E4 241 aa22.68■■□□□ 1.22
TSR1-201ENST00000301364 ZBTB40Q9NUA8 1239 aa22.68■■□□□ 1.22
TSR1-201ENST00000301364 XRCC6P12956 609 aaKnown RBP eCLIP22.68■■□□□ 1.221e-25■□□□□ 9.5
TSR1-201ENST00000301364 TMX3Q96JJ7 454 aa22.67■■□□□ 1.22
TSR1-201ENST00000301364 ZNHIT6Q9NWK9 470 aaKnown RBP22.67■■□□□ 1.22
TSR1-201ENST00000301364 PPP1R42Q7Z4L9 355 aa22.67■■□□□ 1.22
TSR1-201ENST00000301364 MEIS3Q99687 375 aa22.67■■□□□ 1.22
TSR1-201ENST00000301364 USP25Q9UHP3 1055 aa22.67■■□□□ 1.22
TSR1-201ENST00000301364 PHF8Q9UPP1 1060 aa22.67■■□□□ 1.22
TSR1-201ENST00000301364 A2MP01023 1474 aa22.67■■□□□ 1.22
TSR1-201ENST00000301364 EPS15P42566 896 aa22.67■■□□□ 1.22
TSR1-201ENST00000301364 CCDC8Q9H0W5 538 aaPredicted RBP22.67■■□□□ 1.22
TSR1-201ENST00000301364 PDE1AP54750 535 aa22.66■■□□□ 1.22
TSR1-201ENST00000301364 XPCQ01831 940 aaPredicted RBP22.66■■□□□ 1.22
TSR1-201ENST00000301364 PRDM11Q9NQV5 511 aa22.66■■□□□ 1.22
TSR1-201ENST00000301364 UBE2HP62256 183 aa22.66■■□□□ 1.22
TSR1-201ENST00000301364 STIM1Q13586 685 aa22.66■■□□□ 1.22
TSR1-201ENST00000301364 ZSCAN23Q3MJ62 389 aa22.66■■□□□ 1.22
TSR1-201ENST00000301364 TRAPPC8Q9Y2L5 1435 aa22.66■■□□□ 1.22
TSR1-201ENST00000301364 MYD88Q99836 296 aa22.65■■□□□ 1.22
TSR1-201ENST00000301364 ACEP12821 1306 aa22.65■■□□□ 1.22
TSR1-201ENST00000301364 CLCN1P35523 988 aa22.65■■□□□ 1.22
TSR1-201ENST00000301364 ZC3H6P61129 1189 aaKnown RBP22.65■■□□□ 1.22
TSR1-201ENST00000301364 USHBP1Q8N6Y0 703 aa22.65■■□□□ 1.22
TSR1-201ENST00000301364 TNNQ9UQP3 1299 aa22.65■■□□□ 1.22
TSR1-201ENST00000301364 ZMYM4Q5VZL5 1548 aa22.65■■□□□ 1.22
TSR1-201ENST00000301364 KDM2BQ8NHM5 1336 aa22.65■■□□□ 1.22
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms