RNA–Protein interactions for RNA: ENST00000300213.8

CCNDBP1-201, Transcript of cyclin D1 binding protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CCNDBP1, Length 3,660 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCNDBP1-201ENST00000300213 STK3Q13188 491 aa17.54■□□□□ 0.4
CCNDBP1-201ENST00000300213 NOS1P29475 1434 aa17.54■□□□□ 0.4
CCNDBP1-201ENST00000300213 TCEANC2Q96MN5 208 aa17.53■□□□□ 0.4
CCNDBP1-201ENST00000300213 ZNF215Q9UL58 517 aaPredicted RBP17.53■□□□□ 0.4
CCNDBP1-201ENST00000300213 SPTLC3Q9NUV7 552 aa17.53■□□□□ 0.4
CCNDBP1-201ENST00000300213 GJB2P29033 226 aa17.53■□□□□ 0.4
CCNDBP1-201ENST00000300213 PTPN14Q15678 1187 aa17.53■□□□□ 0.4
CCNDBP1-201ENST00000300213 LRRCC1Q9C099 1032 aa17.53■□□□□ 0.4
CCNDBP1-201ENST00000300213 STAG3Q9UJ98 1225 aa17.53■□□□□ 0.4
CCNDBP1-201ENST00000300213 ZSCAN21Q9Y5A6 473 aaPredicted RBP17.53■□□□□ 0.4
CCNDBP1-201ENST00000300213 GRIN2AQ12879 1464 aa17.53■□□□□ 0.4
CCNDBP1-201ENST00000300213 ABCC10Q5T3U5 1492 aa17.53■□□□□ 0.4
CCNDBP1-201ENST00000300213 ARHGAP45Q92619 1136 aa17.52■□□□□ 0.4
CCNDBP1-201ENST00000300213 CTNNA3Q9UI47 895 aa17.52■□□□□ 0.4
CCNDBP1-201ENST00000300213 DNAJC25Q9H1X3 360 aa17.52■□□□□ 0.4
CCNDBP1-201ENST00000300213 FMNL2Q96PY5 1086 aa17.52■□□□□ 0.39
CCNDBP1-201ENST00000300213 SMTNL1A8MU46 457 aa17.51■□□□□ 0.39
CCNDBP1-201ENST00000300213 F13A1P00488 732 aa17.51■□□□□ 0.39
CCNDBP1-201ENST00000300213 LARP1BQ659C4 914 aaKnown RBP17.51■□□□□ 0.39
CCNDBP1-201ENST00000300213 UNC5CLQ8IV45 518 aa17.51■□□□□ 0.39
CCNDBP1-201ENST00000300213 DACT1Q9NYF0 836 aa17.51■□□□□ 0.39
CCNDBP1-201ENST00000300213 PLXNC1O60486 1568 aa17.51■□□□□ 0.39
CCNDBP1-201ENST00000300213 ADAMTS12P58397 1594 aa17.51■□□□□ 0.39
CCNDBP1-201ENST00000300213 AK2P54819 239 aa17.51■□□□□ 0.39
CCNDBP1-201ENST00000300213 ARID5BQ14865 1188 aa17.51■□□□□ 0.39
CCNDBP1-201ENST00000300213 HOMER1Q86YM7 354 aa17.51■□□□□ 0.39
CCNDBP1-201ENST00000300213 PPFIA3O75145 1194 aa17.51■□□□□ 0.39
CCNDBP1-201ENST00000300213 TYRO3Q06418 890 aa17.51■□□□□ 0.39
CCNDBP1-201ENST00000300213 AEBP2Q6ZN18 517 aaPredicted RBP17.5■□□□□ 0.39
CCNDBP1-201ENST00000300213 FAM177A1Q8N128 213 aaPredicted RBP17.5■□□□□ 0.39
CCNDBP1-201ENST00000300213 A0A087WWV3 80 aa17.5■□□□□ 0.39
CCNDBP1-201ENST00000300213 NUTM2FA1L443 756 aa17.5■□□□□ 0.39
CCNDBP1-201ENST00000300213 FAM200AQ8TCP9 573 aa17.5■□□□□ 0.39
CCNDBP1-201ENST00000300213 ANKRD7Q92527 254 aa17.5■□□□□ 0.39
CCNDBP1-201ENST00000300213 CHMLP26374 656 aa17.5■□□□□ 0.39
CCNDBP1-201ENST00000300213 ZNF165P49910 485 aa17.5■□□□□ 0.39
CCNDBP1-201ENST00000300213 CCAR2Q8N163 923 aaKnown RBP17.5■□□□□ 0.39
CCNDBP1-201ENST00000300213 PRAM1Q96QH2 718 aa17.5■□□□□ 0.39
CCNDBP1-201ENST00000300213 NOL10Q9BSC4 688 aaKnown RBP17.5■□□□□ 0.39
CCNDBP1-201ENST00000300213 SYNJ2O15056 1496 aa17.5■□□□□ 0.39
CCNDBP1-201ENST00000300213 GNL2Q13823 731 aaKnown RBP17.49■□□□□ 0.39
CCNDBP1-201ENST00000300213 SKIDA1Q1XH10 827 aa17.49■□□□□ 0.39
CCNDBP1-201ENST00000300213 JAKMIP1Q96N16 626 aaKnown RBP17.49■□□□□ 0.39
CCNDBP1-201ENST00000300213 KDM5AP29375 1690 aaKnown RBP17.49■□□□□ 0.39
CCNDBP1-201ENST00000300213 GABPB1Q06547 395 aaPredicted RBP17.49■□□□□ 0.39
CCNDBP1-201ENST00000300213 TERF2Q15554 542 aa17.49■□□□□ 0.39
CCNDBP1-201ENST00000300213 LIG1P18858 919 aa17.49■□□□□ 0.39
CCNDBP1-201ENST00000300213 INTS4Q96HW7 963 aaKnown RBP17.49■□□□□ 0.39
CCNDBP1-201ENST00000300213 ABCC4O15439 1325 aa17.48■□□□□ 0.39
CCNDBP1-201ENST00000300213 SURF6O75683 361 aaKnown RBP17.48■□□□□ 0.39
CCNDBP1-201ENST00000300213 ZRANB1Q9UGI0 708 aa17.48■□□□□ 0.39
CCNDBP1-201ENST00000300213 SLFN14P0C7P3 912 aa17.48■□□□□ 0.39
CCNDBP1-201ENST00000300213 ZRSR1Q15695 479 aaKnown RBP17.48■□□□□ 0.39
CCNDBP1-201ENST00000300213 KIF18AQ8NI77 898 aa17.48■□□□□ 0.39
CCNDBP1-201ENST00000300213 CALCOCO1Q9P1Z2 691 aa17.48■□□□□ 0.39
CCNDBP1-201ENST00000300213 IFT140Q96RY7 1462 aa17.48■□□□□ 0.39
CCNDBP1-201ENST00000300213 IPO4Q8TEX9 1081 aaKnown RBP17.48■□□□□ 0.39
CCNDBP1-201ENST00000300213 DDX41Q9UJV9 622 aaKnown RBP17.48■□□□□ 0.39
CCNDBP1-201ENST00000300213 CROCC2H7BZ55 1655 aa17.47■□□□□ 0.39
CCNDBP1-201ENST00000300213 CDC42BPAQ5VT25 1732 aa17.47■□□□□ 0.39
CCNDBP1-201ENST00000300213 LIMCH1Q9UPQ0 1083 aa17.47■□□□□ 0.39
CCNDBP1-201ENST00000300213 IQSEC2Q5JU85 1478 aa17.47■□□□□ 0.39
CCNDBP1-201ENST00000300213 MSH6P52701 1360 aa17.47■□□□□ 0.39
CCNDBP1-201ENST00000300213 SKILP12757 684 aa17.47■□□□□ 0.39
CCNDBP1-201ENST00000300213 KRT85P78386 507 aa17.47■□□□□ 0.39
CCNDBP1-201ENST00000300213 CUL4AQ13619 759 aa17.47■□□□□ 0.39
CCNDBP1-201ENST00000300213 ZSCAN25Q6NSZ9 544 aa17.47■□□□□ 0.39
CCNDBP1-201ENST00000300213 CBX8Q9HC52 389 aa17.47■□□□□ 0.39
CCNDBP1-201ENST00000300213 USP16Q9Y5T5 823 aa17.47■□□□□ 0.39
CCNDBP1-201ENST00000300213 ANKRD36BQ8N2N9 1353 aa17.47■□□□□ 0.39
CCNDBP1-201ENST00000300213 GNAI2P04899 355 aa17.46■□□□□ 0.39
CCNDBP1-201ENST00000300213 CACTINQ8WUQ7 758 aaKnown RBP17.46■□□□□ 0.39
CCNDBP1-201ENST00000300213 HTATSF1O43719 755 aaKnown RBP17.46■□□□□ 0.39
CCNDBP1-201ENST00000300213 LMOD3Q0VAK6 560 aa17.46■□□□□ 0.39
CCNDBP1-201ENST00000300213 PRPF40BQ6NWY9 871 aaKnown RBP17.46■□□□□ 0.39
CCNDBP1-201ENST00000300213 G2E3Q7L622 706 aa17.46■□□□□ 0.39
CCNDBP1-201ENST00000300213 SPATA32Q96LK8 384 aa17.46■□□□□ 0.39
CCNDBP1-201ENST00000300213 NPM1P06748 294 aaKnown RBP eCLIP17.46■□□□□ 0.39
CCNDBP1-201ENST00000300213 KMT5BQ4FZB7 885 aa17.46■□□□□ 0.39
CCNDBP1-201ENST00000300213 STK31Q9BXU1 1019 aa17.46■□□□□ 0.39
CCNDBP1-201ENST00000300213 A0A1W2PP64 1363 aa17.46■□□□□ 0.38
CCNDBP1-201ENST00000300213 USP27XA6NNY8 438 aa17.45■□□□□ 0.38
CCNDBP1-201ENST00000300213 SULT6B1Q6IMI4 303 aa17.45■□□□□ 0.38
CCNDBP1-201ENST00000300213 PAXBP1Q9Y5B6 917 aa17.45■□□□□ 0.38
CCNDBP1-201ENST00000300213 ZNF397Q8NF99 534 aaPredicted RBP17.45■□□□□ 0.38
CCNDBP1-201ENST00000300213 ERCC4Q92889 916 aaPredicted RBP17.45■□□□□ 0.38
CCNDBP1-201ENST00000300213 UGGT1Q9NYU2 1555 aa17.45■□□□□ 0.38
CCNDBP1-201ENST00000300213 NEK11Q8NG66 645 aa17.45■□□□□ 0.38
CCNDBP1-201ENST00000300213 FBXO38Q6PIJ6 1188 aa17.44■□□□□ 0.38
CCNDBP1-201ENST00000300213 C14orf93Q9H972 538 aaKnown RBP17.44■□□□□ 0.38
CCNDBP1-201ENST00000300213 PDRG1Q9NUG6 133 aa17.44■□□□□ 0.38
CCNDBP1-201ENST00000300213 ERCC6LQ2NKX8 1250 aa17.44■□□□□ 0.38
CCNDBP1-201ENST00000300213 DNAJC2Q99543 621 aaKnown RBP17.44■□□□□ 0.38
CCNDBP1-201ENST00000300213 POLKQ9UBT6 870 aa17.44■□□□□ 0.38
CCNDBP1-201ENST00000300213 LARGE1O95461 756 aa17.44■□□□□ 0.38
CCNDBP1-201ENST00000300213 IL25Q9H293 177 aa17.44■□□□□ 0.38
CCNDBP1-201ENST00000300213 RASEFQ8IZ41 740 aa17.43■□□□□ 0.38
CCNDBP1-201ENST00000300213 TARBP1Q13395 1621 aaKnown RBP17.43■□□□□ 0.38
CCNDBP1-201ENST00000300213 MYO5CQ9NQX4 1742 aa17.43■□□□□ 0.38
CCNDBP1-201ENST00000300213 TRAPPC8Q9Y2L5 1435 aa17.43■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 101.4 ms