RNA–Protein interactions for RNA: ENST00000298786.4

FAM35A-202, Transcript of Protein FAM35A, humanhuman

TSL 5 BASIC

Gene FAM35A, Length 3,614 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FAM35A-202ENST00000298786 ERBB3P21860 1342 aa6.66□□□□□ -1.34
FAM35A-202ENST00000298786 AXIN2Q9Y2T1 843 aa6.65□□□□□ -1.34
FAM35A-202ENST00000298786 A0A1W2PPC1 479 aa6.65□□□□□ -1.35
FAM35A-202ENST00000298786 CCDC85CA6NKD9 419 aa6.65□□□□□ -1.35
FAM35A-202ENST00000298786 PKN2Q16513 984 aaKnown RBP6.65□□□□□ -1.35
FAM35A-202ENST00000298786 DDX60Q8IY21 1712 aaKnown RBP6.65□□□□□ -1.35
FAM35A-202ENST00000298786 CACNA1SQ13698 1873 aa6.64□□□□□ -1.35
FAM35A-202ENST00000298786 LMNB1P20700 586 aa6.64□□□□□ -1.35
FAM35A-202ENST00000298786 PRAM1Q96QH2 718 aa6.64□□□□□ -1.35
FAM35A-202ENST00000298786 FOXD4L1Q9NU39 408 aa6.64□□□□□ -1.35
FAM35A-202ENST00000298786 ACEP12821 1306 aa6.64□□□□□ -1.35
FAM35A-202ENST00000298786 COL2A1P02458 1487 aaPredicted RBP6.64□□□□□ -1.35
FAM35A-202ENST00000298786 CASP8AP2Q9UKL3 1982 aa6.64□□□□□ -1.35
FAM35A-202ENST00000298786 IL2RBP14784 551 aa6.64□□□□□ -1.35
FAM35A-202ENST00000298786 CFHR5Q9BXR6 569 aa6.64□□□□□ -1.35
FAM35A-202ENST00000298786 RTL1A6NKG5 1358 aa6.63□□□□□ -1.35
FAM35A-202ENST00000298786 ERBB4Q15303 1308 aa6.63□□□□□ -1.35
FAM35A-202ENST00000298786 ZC3H6P61129 1189 aaKnown RBP6.63□□□□□ -1.35
FAM35A-202ENST00000298786 RC3H1Q5TC82 1133 aaKnown RBP6.63□□□□□ -1.35
FAM35A-202ENST00000298786 NUDT16Q96DE0 195 aaKnown RBP6.63□□□□□ -1.35
FAM35A-202ENST00000298786 PDZRN3Q9UPQ7 1066 aa6.63□□□□□ -1.35
FAM35A-202ENST00000298786 ECE1P42892 770 aa6.63□□□□□ -1.35
FAM35A-202ENST00000298786 TLL2Q9Y6L7 1015 aa6.63□□□□□ -1.35
FAM35A-202ENST00000298786 HOXD11P31277 338 aaPredicted RBP6.62□□□□□ -1.35
FAM35A-202ENST00000298786 CCDC61Q9Y6R9 512 aa6.62□□□□□ -1.35
FAM35A-202ENST00000298786 HIRIP3Q9BW71 556 aaPredicted RBP6.62□□□□□ -1.35
FAM35A-202ENST00000298786 NKX1-1Q15270 411 aaPredicted RBP6.62□□□□□ -1.35
FAM35A-202ENST00000298786 REM2Q8IYK8 340 aaPredicted RBP6.62□□□□□ -1.35
FAM35A-202ENST00000298786 PSME4Q14997 1843 aa6.61□□□□□ -1.35
FAM35A-202ENST00000298786 CNTNAP4Q9C0A0 1308 aa6.61□□□□□ -1.35
FAM35A-202ENST00000298786 TOM1L2Q6ZVM7 507 aa6.61□□□□□ -1.35
FAM35A-202ENST00000298786 CCNL1Q9UK58 526 aaPredicted RBP6.61□□□□□ -1.35
FAM35A-202ENST00000298786 DEFB115Q30KQ5 88 aa6.61□□□□□ -1.35
FAM35A-202ENST00000298786 CCDC87Q9NVE4 849 aa6.61□□□□□ -1.35
FAM35A-202ENST00000298786 PIM2Q9P1W9 311 aa6.61□□□□□ -1.35
FAM35A-202ENST00000298786 MRC1P22897 1456 aa6.61□□□□□ -1.35
FAM35A-202ENST00000298786 OTUD5Q96G74 571 aa6.61□□□□□ -1.35
FAM35A-202ENST00000298786 USP47Q96K76 1375 aa6.6□□□□□ -1.35
FAM35A-202ENST00000298786 FMR1Q06787 632 aaKnown RBP eCLIP6.6□□□□□ -1.35
FAM35A-202ENST00000298786 KIF24Q5T7B8 1368 aa6.6□□□□□ -1.35
FAM35A-202ENST00000298786 DPEP1P16444 411 aa6.6□□□□□ -1.35
FAM35A-202ENST00000298786 SMARCC1Q92922 1105 aaPredicted RBP6.6□□□□□ -1.35
FAM35A-202ENST00000298786 RNF181Q9P0P0 153 aa6.6□□□□□ -1.35
FAM35A-202ENST00000298786 PGAP2Q9UHJ9 254 aa6.6□□□□□ -1.35
FAM35A-202ENST00000298786 NLGN1Q8N2Q7 840 aa6.59□□□□□ -1.35
FAM35A-202ENST00000298786 NGDNQ8NEJ9 315 aaKnown RBP6.59□□□□□ -1.35
FAM35A-202ENST00000298786 KDM2AQ9Y2K7 1162 aa6.59□□□□□ -1.35
FAM35A-202ENST00000298786 PALLDQ8WX93 1383 aa6.59□□□□□ -1.35
FAM35A-202ENST00000298786 MKRN1Q9UHC7 482 aaKnown RBP6.59□□□□□ -1.35
FAM35A-202ENST00000298786 PDE4DIPQ5VU43 2346 aa6.59□□□□□ -1.35
FAM35A-202ENST00000298786 IQCA1LA6NCM1 817 aa6.58□□□□□ -1.36
FAM35A-202ENST00000298786 DALRD3Q5D0E6 543 aaKnown RBP6.58□□□□□ -1.36
FAM35A-202ENST00000298786 ARHGAP27Q6ZUM4 889 aa6.58□□□□□ -1.36
FAM35A-202ENST00000298786 AMIGO3Q86WK7 504 aa6.58□□□□□ -1.36
FAM35A-202ENST00000298786 PRDM6Q9NQX0 595 aa6.58□□□□□ -1.36
FAM35A-202ENST00000298786 IGSF5Q9NSI5 407 aa6.58□□□□□ -1.36
FAM35A-202ENST00000298786 PLA2G5P39877 138 aa6.58□□□□□ -1.36
FAM35A-202ENST00000298786 LMOD2Q6P5Q4 547 aa6.58□□□□□ -1.36
FAM35A-202ENST00000298786 SLX4Q8IY92 1834 aa6.58□□□□□ -1.36
FAM35A-202ENST00000298786 KIF20BQ96Q89 1820 aa6.58□□□□□ -1.36
FAM35A-202ENST00000298786 ZNF609O15014 1411 aa6.58□□□□□ -1.36
FAM35A-202ENST00000298786 CHIC2Q9UKJ5 165 aa6.57□□□□□ -1.36
FAM35A-202ENST00000298786 LRRC37AA6NMS7 1700 aa6.57□□□□□ -1.36
FAM35A-202ENST00000298786 CAPN2P17655 700 aa6.57□□□□□ -1.36
FAM35A-202ENST00000298786 USP35Q9P2H5 1018 aa6.57□□□□□ -1.36
FAM35A-202ENST00000298786 TMEM132EQ6IEE7 984 aa6.57□□□□□ -1.36
FAM35A-202ENST00000298786 ABTB2Q8N961 1025 aa6.57□□□□□ -1.36
FAM35A-202ENST00000298786 TAF1DQ9H5J8 278 aaPredicted RBP6.57□□□□□ -1.36
FAM35A-202ENST00000298786 NFKBIEO00221 500 aa6.56□□□□□ -1.36
FAM35A-202ENST00000298786 NUTM2FA1L443 756 aa6.56□□□□□ -1.36
FAM35A-202ENST00000298786 SIPA1L3O60292 1781 aaPredicted RBP6.56□□□□□ -1.36
FAM35A-202ENST00000298786 TM4SF1P30408 202 aa6.56□□□□□ -1.36
FAM35A-202ENST00000298786 DGKZQ13574 1117 aa6.56□□□□□ -1.36
FAM35A-202ENST00000298786 SBNO2Q9Y2G9 1366 aa6.56□□□□□ -1.36
FAM35A-202ENST00000298786 FCHSD2O94868 740 aa6.55□□□□□ -1.36
FAM35A-202ENST00000298786 CAPNS2Q96L46 248 aa6.55□□□□□ -1.36
FAM35A-202ENST00000298786 COL3A1P02461 1466 aaPredicted RBP6.55□□□□□ -1.36
FAM35A-202ENST00000298786 RIC1Q4ADV7 1423 aa6.55□□□□□ -1.36
FAM35A-202ENST00000298786 CTU1Q7Z7A3 348 aaKnown RBP6.55□□□□□ -1.36
FAM35A-202ENST00000298786 PNMA8AQ86V59 439 aaPredicted RBP6.55□□□□□ -1.36
FAM35A-202ENST00000298786 RNF216Q9NWF9 866 aaPredicted RBP6.54□□□□□ -1.36
FAM35A-202ENST00000298786 ZNF692Q9BU19 519 aaPredicted RBP6.54□□□□□ -1.36
FAM35A-202ENST00000298786 STK26Q9P289 416 aa6.54□□□□□ -1.36
FAM35A-202ENST00000298786 BCS1LQ9Y276 419 aa6.54□□□□□ -1.36
FAM35A-202ENST00000298786 ALPK3Q96L96 1907 aa6.53□□□□□ -1.36
FAM35A-202ENST00000298786 GYS1P13807 737 aa6.53□□□□□ -1.36
FAM35A-202ENST00000298786 KLHL34Q8N239 644 aa6.53□□□□□ -1.36
FAM35A-202ENST00000298786 ACSBG1Q96GR2 724 aa6.53□□□□□ -1.36
FAM35A-202ENST00000298786 TONSLQ96HA7 1378 aa6.53□□□□□ -1.36
FAM35A-202ENST00000298786 LAMB2P55268 1798 aa6.53□□□□□ -1.36
FAM35A-202ENST00000298786 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP6.52□□□□□ -1.36
FAM35A-202ENST00000298786 A0A0G2JLW4 131 aa6.52□□□□□ -1.36
FAM35A-202ENST00000298786 MMP10P09238 476 aa6.52□□□□□ -1.36
FAM35A-202ENST00000298786 MSL1Q68DK7 614 aa6.52□□□□□ -1.36
FAM35A-202ENST00000298786 INTS3Q68E01 1043 aaKnown RBP6.52□□□□□ -1.36
FAM35A-202ENST00000298786 DPY19L2Q6NUT2 758 aa6.52□□□□□ -1.36
FAM35A-202ENST00000298786 DDX21Q9NR30 783 aaKnown RBP eCLIP6.52□□□□□ -1.36
FAM35A-202ENST00000298786 TTC21BQ7Z4L5 1316 aa6.52□□□□□ -1.37
FAM35A-202ENST00000298786 LINC00116Q8NCU8 138 aa6.52□□□□□ -1.37
FAM35A-202ENST00000298786 HPS5Q9UPZ3 1129 aa6.52□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 16.4 ms