RNA–Protein interactions for RNA: ENST00000296978.3

TMEM200A-201, Transcript of transmembrane protein 200A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TMEM200A, Length 3,512 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM200A-201ENST00000296978 PNMA6EA0A0J9YXQ4 647 aa15.15■□□□□ 0.02
TMEM200A-201ENST00000296978 CPA1P15085 419 aa15.15■□□□□ 0.02
TMEM200A-201ENST00000296978 SLC26A8Q96RN1 970 aa15.15■□□□□ 0.02
TMEM200A-201ENST00000296978 ZDHHC9Q9Y397 364 aa15.15■□□□□ 0.02
TMEM200A-201ENST00000296978 RTL1A6NKG5 1358 aa15.15■□□□□ 0.02
TMEM200A-201ENST00000296978 POGZQ7Z3K3 1410 aa15.15■□□□□ 0.02
TMEM200A-201ENST00000296978 NLRP6P59044 892 aa15.14■□□□□ 0.01
TMEM200A-201ENST00000296978 KIAA1210Q9ULL0 1709 aa15.14■□□□□ 0.01
TMEM200A-201ENST00000296978 CCDC83Q8IWF9 413 aa15.14■□□□□ 0.01
TMEM200A-201ENST00000296978 MROH2AA6NES4 1674 aa15.14■□□□□ 0.01
TMEM200A-201ENST00000296978 ATP6V1DQ9Y5K8 247 aa15.14■□□□□ 0.01
TMEM200A-201ENST00000296978 CHL1O00533 1208 aa15.13■□□□□ 0.01
TMEM200A-201ENST00000296978 FAM135BQ49AJ0 1406 aa15.13■□□□□ 0.01
TMEM200A-201ENST00000296978 ADGRB3O60242 1522 aa15.13■□□□□ 0.01
TMEM200A-201ENST00000296978 ADCY5O95622 1261 aa15.13■□□□□ 0.01
TMEM200A-201ENST00000296978 CASTP20810 708 aaKnown RBP15.13■□□□□ 0.01
TMEM200A-201ENST00000296978 CHMLP26374 656 aa15.13■□□□□ 0.01
TMEM200A-201ENST00000296978 GIMAP6Q6P9H5 292 aa15.13■□□□□ 0.01
TMEM200A-201ENST00000296978 SASS6Q6UVJ0 657 aa15.13■□□□□ 0.01
TMEM200A-201ENST00000296978 MAP7D2Q96T17 732 aa15.13■□□□□ 0.01
TMEM200A-201ENST00000296978 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP15.13■□□□□ 0.01
TMEM200A-201ENST00000296978 ANXA1P04083 346 aa15.13■□□□□ 0.01
TMEM200A-201ENST00000296978 MTHFSDQ2M296 383 aaKnown RBP15.13■□□□□ 0.01
TMEM200A-201ENST00000296978 LRRC7Q96NW7 1537 aa15.12■□□□□ 0.01
TMEM200A-201ENST00000296978 UHRF1BP1LA0JNW5 1464 aa15.12■□□□□ 0.01
TMEM200A-201ENST00000296978 C9orf78Q9NZ63 289 aaPredicted RBP15.12■□□□□ 0.01
TMEM200A-201ENST00000296978 CNTROBQ8N137 903 aa15.12■□□□□ 0.01
TMEM200A-201ENST00000296978 USHBP1Q8N6Y0 703 aa15.12■□□□□ 0.01
TMEM200A-201ENST00000296978 ZSCAN21Q9Y5A6 473 aaPredicted RBP15.12■□□□□ 0.01
TMEM200A-201ENST00000296978 PTCH1Q13635 1447 aa15.12■□□□□ 0.01
TMEM200A-201ENST00000296978 FOSBP53539 338 aa15.12■□□□□ 0.01
TMEM200A-201ENST00000296978 CAMK4Q16566 473 aa15.12■□□□□ 0.01
TMEM200A-201ENST00000296978 YEATS2Q9ULM3 1422 aa15.11■□□□□ 0.01
TMEM200A-201ENST00000296978 UNC5CLQ8IV45 518 aa15.11■□□□□ 0.01
TMEM200A-201ENST00000296978 JAKMIP1Q96N16 626 aaKnown RBP15.11■□□□□ 0.01
TMEM200A-201ENST00000296978 ADGRB1O14514 1584 aa15.11■□□□□ 0.01
TMEM200A-201ENST00000296978 ACEP12821 1306 aa15.11■□□□□ 0.01
TMEM200A-201ENST00000296978 IFIT2P09913 472 aaKnown RBP15.11■□□□□ 0.01
TMEM200A-201ENST00000296978 RBM33Q96EV2 1170 aaKnown RBP15.11■□□□□ 0.01
TMEM200A-201ENST00000296978 HS1BP3Q53T59 392 aa15.1■□□□□ 0.01
TMEM200A-201ENST00000296978 PPP1R42Q7Z4L9 355 aa15.1■□□□□ 0.01
TMEM200A-201ENST00000296978 SETBP1Q9Y6X0 1596 aa15.1■□□□□ 0.01
TMEM200A-201ENST00000296978 ZKSCAN1P17029 563 aaPredicted RBP15.1■□□□□ 0.01
TMEM200A-201ENST00000296978 STK3Q13188 491 aa15.1■□□□□ 0.01
TMEM200A-201ENST00000296978 ZNF592Q92610 1267 aa15.1■□□□□ 0.01
TMEM200A-201ENST00000296978 JARID2Q92833 1246 aaPredicted RBP15.1■□□□□ 0.01
TMEM200A-201ENST00000296978 SRCIN1Q9C0H9 1055 aa15.1■□□□□ 0.01
TMEM200A-201ENST00000296978 BRD1O95696 1058 aa15.09■□□□□ 0.01
TMEM200A-201ENST00000296978 PRPF40BQ6NWY9 871 aaKnown RBP15.09■□□□□ 0.01
TMEM200A-201ENST00000296978 PNPLA6Q8IY17 1366 aa15.09■□□□□ 0.01
TMEM200A-201ENST00000296978 NRXN1Q9ULB1 1477 aa15.09■□□□□ 0.01
TMEM200A-201ENST00000296978 GOLGA6L6A8MZA4 724 aa15.09■□□□□ 0.01
TMEM200A-201ENST00000296978 CCDC183Q5T5S1 534 aa15.09■□□□□ 0.01
TMEM200A-201ENST00000296978 FBXW7Q969H0 707 aa15.09■□□□□ 0.01
TMEM200A-201ENST00000296978 STX6O43752 255 aa15.09■□□□□ 0.01
TMEM200A-201ENST00000296978 HSP90B1P14625 803 aaKnown RBP15.08■□□□□ 0.01
TMEM200A-201ENST00000296978 CBX1P83916 185 aa15.08■□□□□ 0.01
TMEM200A-201ENST00000296978 TEFQ10587 303 aa15.08■□□□□ 0.01
TMEM200A-201ENST00000296978 CLASRPQ8N2M8 674 aaKnown RBP15.08■□□□□ 0.01
TMEM200A-201ENST00000296978 TCEANC2Q96MN5 208 aa15.08■□□□□ 0.01
TMEM200A-201ENST00000296978 TTC21BQ7Z4L5 1316 aa15.08■□□□□ 0
TMEM200A-201ENST00000296978 AIMP1Q12904 312 aaKnown RBP15.08■□□□□ 0
TMEM200A-201ENST00000296978 NECAB1Q8N987 351 aa15.08■□□□□ 0
TMEM200A-201ENST00000296978 RUFY2Q8WXA3 655 aa15.08■□□□□ 0
TMEM200A-201ENST00000296978 GPATCH3Q96I76 525 aa15.08■□□□□ 0
TMEM200A-201ENST00000296978 CYP2E1P05181 493 aaPredicted RBP15.08■□□□□ 0
TMEM200A-201ENST00000296978 BICD2Q8TD16 824 aa15.08■□□□□ 0
TMEM200A-201ENST00000296978 ATP8B2P98198 1209 aa15.07■□□□□ 0
TMEM200A-201ENST00000296978 TAF7Q15545 349 aaPredicted RBP15.07■□□□□ 0
TMEM200A-201ENST00000296978 IBTKQ9P2D0 1353 aaPredicted RBP15.07■□□□□ 0
TMEM200A-201ENST00000296978 DYNC1I1O14576 645 aa15.07■□□□□ 0
TMEM200A-201ENST00000296978 MCM5P33992 734 aa15.07■□□□□ 0
TMEM200A-201ENST00000296978 CEBPZQ03701 1054 aaKnown RBP15.07■□□□□ 0
TMEM200A-201ENST00000296978 NOLC1Q14978 699 aaKnown RBP eCLIP15.07■□□□□ 0
TMEM200A-201ENST00000296978 ZHX1Q9UKY1 873 aaPredicted RBP15.07■□□□□ 0
TMEM200A-201ENST00000296978 INO80Q9ULG1 1556 aaPredicted RBP15.07■□□□□ 0
TMEM200A-201ENST00000296978 ZNF500O60304 480 aaPredicted RBP15.06■□□□□ 0
TMEM200A-201ENST00000296978 DNM1Q05193 864 aaKnown RBP15.06■□□□□ 0
TMEM200A-201ENST00000296978 CLEC17AQ6ZS10 378 aa15.06■□□□□ 0
TMEM200A-201ENST00000296978 CKAP2LQ8IYA6 745 aa15.06■□□□□ 0
TMEM200A-201ENST00000296978 FAM184AQ8NB25 1140 aa15.06■□□□□ 0
TMEM200A-201ENST00000296978 SIL1Q9H173 461 aa15.06■□□□□ 0
TMEM200A-201ENST00000296978 PHAXQ9H814 394 aaKnown RBP15.06■□□□□ 0
TMEM200A-201ENST00000296978 PDRG1Q9NUG6 133 aa15.06■□□□□ 0
TMEM200A-201ENST00000296978 LIMCH1Q9UPQ0 1083 aa15.06■□□□□ 0
TMEM200A-201ENST00000296978 AK2P54819 239 aa15.06■□□□□ 0
TMEM200A-201ENST00000296978 LARP1BQ659C4 914 aaKnown RBP15.06■□□□□ 0
TMEM200A-201ENST00000296978 GNAT3A8MTJ3 354 aa15.06■□□□□ 0
TMEM200A-201ENST00000296978 CYP46A1Q9Y6A2 500 aa15.06■□□□□ 0
TMEM200A-201ENST00000296978 ZSCAN22P10073 491 aaPredicted RBP15.05■□□□□ 0
TMEM200A-201ENST00000296978 SYT1P21579 422 aa15.05■□□□□ 0
TMEM200A-201ENST00000296978 GJB2P29033 226 aa15.05■□□□□ 0
TMEM200A-201ENST00000296978 RHPN1Q8TCX5 695 aa15.05■□□□□ 0
TMEM200A-201ENST00000296978 TRIM5Q9C035 493 aa15.05■□□□□ 0
TMEM200A-201ENST00000296978 TFIP11Q9UBB9 837 aaKnown RBP15.05■□□□□ 0
TMEM200A-201ENST00000296978 ABCC3O15438 1527 aa15.05■□□□□ 0
TMEM200A-201ENST00000296978 CFAP74Q9C0B2 1584 aa15.05■□□□□ 0
TMEM200A-201ENST00000296978 MTERF4Q7Z6M4 381 aaKnown RBP15.05■□□□□ -0
TMEM200A-201ENST00000296978 MAP3K19Q56UN5 1328 aa15.05■□□□□ -0
TMEM200A-201ENST00000296978 PIK3R4Q99570 1358 aa15.05■□□□□ -0
Retrieved 100 of 20,778 RNA–protein pairs in 24.6 ms