RNA–Protein interactions for RNA: ENST00000296930.9

NPM1-201, Transcript of nucleophosmin 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NPM1, Length 1,758 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPM1-201ENST00000296930 ATP6V1AP38606 617 aa22.15■■□□□ 1.14
NPM1-201ENST00000296930 CHD4Q14839 1912 aa22.14■■□□□ 1.14
NPM1-201ENST00000296930 KDM6AO15550 1401 aaPredicted RBP22.14■■□□□ 1.13
NPM1-201ENST00000296930 CC2D1BQ5T0F9 858 aaKnown RBP22.14■■□□□ 1.13
NPM1-201ENST00000296930 MSL1Q68DK7 614 aa22.14■■□□□ 1.13
NPM1-201ENST00000296930 LINC00116Q8NCU8 138 aa22.14■■□□□ 1.13
NPM1-201ENST00000296930 ZNF831Q5JPB2 1677 aa22.13■■□□□ 1.13
NPM1-201ENST00000296930 NPC1L1Q9UHC9 1359 aa22.13■■□□□ 1.13
NPM1-201ENST00000296930 UTRNP46939 3433 aa22.12■■□□□ 1.13
NPM1-201ENST00000296930 SSFA2P28290 1259 aa22.12■■□□□ 1.13
NPM1-201ENST00000296930 CABP4P57796 275 aa22.12■■□□□ 1.13
NPM1-201ENST00000296930 ITPK1Q13572 414 aa22.12■■□□□ 1.13
NPM1-201ENST00000296930 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP22.12■■□□□ 1.13
NPM1-201ENST00000296930 AMIGO3Q86WK7 504 aa22.12■■□□□ 1.13
NPM1-201ENST00000296930 PHF14O94880 888 aa22.11■■□□□ 1.13
NPM1-201ENST00000296930 GPR162Q16538 588 aa22.1■■□□□ 1.13
NPM1-201ENST00000296930 DIEXFQ68CQ4 756 aaKnown RBP22.1■■□□□ 1.13
NPM1-201ENST00000296930 SCN11AQ9UI33 1791 aa22.09■■□□□ 1.13
NPM1-201ENST00000296930 GNPATO15228 680 aa22.09■■□□□ 1.13
NPM1-201ENST00000296930 NLGN2Q8NFZ4 835 aa22.09■■□□□ 1.13
NPM1-201ENST00000296930 RBM42Q9BTD8 480 aaKnown RBP22.09■■□□□ 1.13
NPM1-201ENST00000296930 DIAPH1O60610 1272 aaKnown RBP22.08■■□□□ 1.13
NPM1-201ENST00000296930 SMIM5Q71RC9 77 aa22.07■■□□□ 1.12
NPM1-201ENST00000296930 AKAP4Q5JQC9 854 aa22.07■■□□□ 1.12
NPM1-201ENST00000296930 COL5A3P25940 1745 aaPredicted RBP22.06■■□□□ 1.12
NPM1-201ENST00000296930 HMOX1P09601 288 aa22.06■■□□□ 1.12
NPM1-201ENST00000296930 NFATC2IPQ8NCF5 419 aa22.06■■□□□ 1.12
NPM1-201ENST00000296930 SLC4A9Q96Q91 983 aa22.06■■□□□ 1.12
NPM1-201ENST00000296930 DDX10Q13206 875 aaKnown RBP22.05■■□□□ 1.12
NPM1-201ENST00000296930 CD2APQ9Y5K6 639 aa22.05■■□□□ 1.12
NPM1-201ENST00000296930 PELP1Q8IZL8 1130 aaKnown RBP22.04■■□□□ 1.12
NPM1-201ENST00000296930 GOLGB1Q14789 3259 aaKnown RBP22.04■■□□□ 1.12
NPM1-201ENST00000296930 VIRMAQ69YN4 1812 aaKnown RBP22.04■■□□□ 1.12
NPM1-201ENST00000296930 CNGB1Q14028 1251 aaPredicted RBP22.04■■□□□ 1.12
NPM1-201ENST00000296930 RC3H1Q5TC82 1133 aaKnown RBP22.04■■□□□ 1.12
NPM1-201ENST00000296930 RTCBQ9Y3I0 505 aaKnown RBP22.04■■□□□ 1.12
NPM1-201ENST00000296930 CNTNAP4Q9C0A0 1308 aa22.03■■□□□ 1.12
NPM1-201ENST00000296930 PTCD1O75127 700 aaKnown RBP22.02■■□□□ 1.11
NPM1-201ENST00000296930 TRAPPC3LQ5T215 181 aa22.02■■□□□ 1.11
NPM1-201ENST00000296930 COL3A1P02461 1466 aaPredicted RBP22.01■■□□□ 1.11
NPM1-201ENST00000296930 ADRA2BP18089 450 aa22.01■■□□□ 1.11
NPM1-201ENST00000296930 MYH14Q7Z406 1995 aaKnown RBP22.01■■□□□ 1.11
NPM1-201ENST00000296930 SLC52A2Q9HAB3 445 aa21.99■■□□□ 1.11
NPM1-201ENST00000296930 CICQ96RK0 1608 aaPredicted RBP21.99■■□□□ 1.11
NPM1-201ENST00000296930 GRIN3BO60391 1043 aa21.99■■□□□ 1.11
NPM1-201ENST00000296930 RPS6KA4O75676 772 aa21.99■■□□□ 1.11
NPM1-201ENST00000296930 MTHFSDQ2M296 383 aaKnown RBP21.99■■□□□ 1.11
NPM1-201ENST00000296930 ZNF784Q8NCA9 323 aaPredicted RBP21.99■■□□□ 1.11
NPM1-201ENST00000296930 LGR6Q9HBX8 967 aa21.99■■□□□ 1.11
NPM1-201ENST00000296930 RNMTO43148 476 aaKnown RBP21.98■■□□□ 1.11
NPM1-201ENST00000296930 MRC1P22897 1456 aa21.98■■□□□ 1.11
NPM1-201ENST00000296930 ADAMTS7Q9UKP4 1686 aa21.97■■□□□ 1.11
NPM1-201ENST00000296930 U2SURPO15042 1029 aaKnown RBP21.97■■□□□ 1.11
NPM1-201ENST00000296930 TJP1Q07157 1748 aa21.97■■□□□ 1.11
NPM1-201ENST00000296930 YBX3P16989 372 aaKnown RBP eCLIP21.97■■□□□ 1.111e-48■□□□□ 10.1
NPM1-201ENST00000296930 ARHGEF1Q92888 912 aaKnown RBP21.97■■□□□ 1.11
NPM1-201ENST00000296930 NLGN1Q8N2Q7 840 aa21.96■■□□□ 1.11
NPM1-201ENST00000296930 RFC4P35249 363 aa21.95■■□□□ 1.1
NPM1-201ENST00000296930 CRKLP46109 303 aaKnown RBP21.95■■□□□ 1.1
NPM1-201ENST00000296930 CFAP53Q96M91 514 aa21.95■■□□□ 1.1
NPM1-201ENST00000296930 MMP10P09238 476 aa21.94■■□□□ 1.1
NPM1-201ENST00000296930 C4AP0C0L4 1744 aa21.94■■□□□ 1.1
NPM1-201ENST00000296930 GYS1P13807 737 aa21.92■■□□□ 1.1
NPM1-201ENST00000296930 GAS2L2Q8NHY3 880 aa21.92■■□□□ 1.1
NPM1-201ENST00000296930 KIF13BQ9NQT8 1826 aa21.91■■□□□ 1.1
NPM1-201ENST00000296930 SLC39A6Q13433 755 aa21.9■■□□□ 1.1
NPM1-201ENST00000296930 DNAJC10Q8IXB1 793 aa21.89■■□□□ 1.1
NPM1-201ENST00000296930 NUDCQ9Y266 331 aa21.89■■□□□ 1.1
NPM1-201ENST00000296930 KCPQ6ZWJ8 1503 aa21.89■■□□□ 1.09
NPM1-201ENST00000296930 GNAT3A8MTJ3 354 aa21.89■■□□□ 1.09
NPM1-201ENST00000296930 INTS5Q6P9B9 1019 aaKnown RBP21.89■■□□□ 1.09
NPM1-201ENST00000296930 UBR2Q8IWV8 1755 aa21.88■■□□□ 1.09
NPM1-201ENST00000296930 PPP2R1AP30153 589 aa21.88■■□□□ 1.09
NPM1-201ENST00000296930 CCDC87Q9NVE4 849 aa21.88■■□□□ 1.09
NPM1-201ENST00000296930 VSIG10Q8N0Z9 540 aa21.87■■□□□ 1.09
NPM1-201ENST00000296930 PARP3Q9Y6F1 533 aa21.87■■□□□ 1.09
NPM1-201ENST00000296930 USP42Q9H9J4 1324 aaKnown RBP21.86■■□□□ 1.09
NPM1-201ENST00000296930 CYP19A1P11511 503 aaPredicted RBP21.86■■□□□ 1.09
NPM1-201ENST00000296930 TEFQ10587 303 aa21.86■■□□□ 1.09
NPM1-201ENST00000296930 C10orf71Q711Q0 1435 aa21.85■■□□□ 1.09
NPM1-201ENST00000296930 PRKAR2BP31323 418 aa21.85■■□□□ 1.09
NPM1-201ENST00000296930 TGFB2P61812 414 aa21.85■■□□□ 1.09
NPM1-201ENST00000296930 TTC5Q8N0Z6 440 aa21.85■■□□□ 1.09
NPM1-201ENST00000296930 IL17REQ8NFR9 667 aa21.85■■□□□ 1.09
NPM1-201ENST00000296930 RSPH6AQ9H0K4 717 aa21.85■■□□□ 1.09
NPM1-201ENST00000296930 SIPA1L3O60292 1781 aaPredicted RBP21.85■■□□□ 1.09
NPM1-201ENST00000296930 SRP68Q9UHB9 627 aaKnown RBP21.84■■□□□ 1.09
NPM1-201ENST00000296930 PXDNLA1KZ92 1463 aa21.84■■□□□ 1.09
NPM1-201ENST00000296930 KIAA1551Q9HCM1 1747 aa21.84■■□□□ 1.09
NPM1-201ENST00000296930 N4BP2Q86UW6 1770 aaPredicted RBP21.84■■□□□ 1.09
NPM1-201ENST00000296930 SOS1Q07889 1333 aaPredicted RBP21.84■■□□□ 1.09
NPM1-201ENST00000296930 PHACTR3Q96KR7 559 aa21.83■■□□□ 1.09
NPM1-201ENST00000296930 WWC3Q9ULE0 1092 aa21.83■■□□□ 1.09
NPM1-201ENST00000296930 ZPR1O75312 459 aa21.82■■□□□ 1.08
NPM1-201ENST00000296930 U2AF1L5P0DN76 240 aaPredicted RBP21.82■■□□□ 1.08
NPM1-201ENST00000296930 U2AF1Q01081 240 aaKnown RBP eCLIP21.82■■□□□ 1.08
NPM1-201ENST00000296930 FKBP8Q14318 412 aa21.82■■□□□ 1.08
NPM1-201ENST00000296930 MIER1Q8N108 512 aa21.82■■□□□ 1.08
NPM1-201ENST00000296930 CEMIPQ8WUJ3 1361 aa21.81■■□□□ 1.08
NPM1-201ENST00000296930 FCHSD2O94868 740 aa21.8■■□□□ 1.08
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms