RNA–Protein interactions for RNA: ENST00000296615.10

RNF180-201, Transcript of ring finger protein 180, humanhuman

TSL 1 (best) BASIC

Gene RNF180, Length 1,727 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF180-201ENST00000296615 DCAF5Q96JK2 942 aa27.44■■□□□ 1.98
RNF180-201ENST00000296615 KDM2BQ8NHM5 1336 aa27.43■■□□□ 1.98
RNF180-201ENST00000296615 PARP4Q9UKK3 1724 aaKnown RBP27.43■■□□□ 1.98
RNF180-201ENST00000296615 ITPRIPQ8IWB1 547 aa27.43■■□□□ 1.98
RNF180-201ENST00000296615 CCDC30Q5VVM6 783 aa27.42■■□□□ 1.98
RNF180-201ENST00000296615 CENPQQ7L2Z9 268 aaPredicted RBP27.42■■□□□ 1.98
RNF180-201ENST00000296615 ABCC4O15439 1325 aa27.42■■□□□ 1.98
RNF180-201ENST00000296615 KDM3BQ7LBC6 1761 aa27.42■■□□□ 1.98
RNF180-201ENST00000296615 SLC4A2P04920 1241 aa27.41■■□□□ 1.98
RNF180-201ENST00000296615 HOXB7P09629 217 aa27.41■■□□□ 1.98
RNF180-201ENST00000296615 KCNQ3O43525 872 aa27.41■■□□□ 1.98
RNF180-201ENST00000296615 SLC52A2Q9HAB3 445 aa27.41■■□□□ 1.98
RNF180-201ENST00000296615 PTPRCP08575 1304 aa27.4■■□□□ 1.98
RNF180-201ENST00000296615 PCDH11XQ9BZA7 1347 aa27.4■■□□□ 1.98
RNF180-201ENST00000296615 PCDH11YQ9BZA8 1340 aa27.4■■□□□ 1.98
RNF180-201ENST00000296615 STK31Q9BXU1 1019 aa27.4■■□□□ 1.98
RNF180-201ENST00000296615 CERKQ8TCT0 537 aa27.39■■□□□ 1.98
RNF180-201ENST00000296615 CHMP4AQ9BY43 222 aa27.38■■□□□ 1.97
RNF180-201ENST00000296615 ADAMTS2O95450 1211 aa27.37■■□□□ 1.97
RNF180-201ENST00000296615 SIPA1L3O60292 1781 aaPredicted RBP27.37■■□□□ 1.97
RNF180-201ENST00000296615 SCN11AQ9UI33 1791 aa27.37■■□□□ 1.97
RNF180-201ENST00000296615 MRC1P22897 1456 aa27.36■■□□□ 1.97
RNF180-201ENST00000296615 PCDHB15Q9Y5E8 787 aa27.36■■□□□ 1.97
RNF180-201ENST00000296615 HEG1Q9ULI3 1381 aa27.35■■□□□ 1.97
RNF180-201ENST00000296615 VIRMAQ69YN4 1812 aaKnown RBP27.35■■□□□ 1.97
RNF180-201ENST00000296615 NKX1-1Q15270 411 aaPredicted RBP27.35■■□□□ 1.97
RNF180-201ENST00000296615 HDGFL1Q5TGJ6 251 aa27.35■■□□□ 1.97
RNF180-201ENST00000296615 NFATC2IPQ8NCF5 419 aa27.35■■□□□ 1.97
RNF180-201ENST00000296615 CHMP4BQ9H444 224 aaKnown RBP27.35■■□□□ 1.97
RNF180-201ENST00000296615 USP35Q9P2H5 1018 aa27.35■■□□□ 1.97
RNF180-201ENST00000296615 RGS12O14924 1447 aa27.35■■□□□ 1.97
RNF180-201ENST00000296615 ZBTB40Q9NUA8 1239 aa27.34■■□□□ 1.97
RNF180-201ENST00000296615 NUTM2BA6NNL0 878 aaPredicted RBP27.33■■□□□ 1.97
RNF180-201ENST00000296615 NUTM2EB1AL46 878 aaPredicted RBP27.33■■□□□ 1.97
RNF180-201ENST00000296615 NUTM2AQ8IVF1 878 aaPredicted RBP27.33■■□□□ 1.97
RNF180-201ENST00000296615 IGHDP01880 384 aa27.33■■□□□ 1.96
RNF180-201ENST00000296615 G2E3Q7L622 706 aa27.33■■□□□ 1.96
RNF180-201ENST00000296615 INTS3Q68E01 1043 aaKnown RBP27.32■■□□□ 1.96
RNF180-201ENST00000296615 ZNF790Q6PG37 636 aa27.32■■□□□ 1.96
RNF180-201ENST00000296615 DISP2A7MBM2 1401 aa27.31■■□□□ 1.96
RNF180-201ENST00000296615 JCADQ9P266 1359 aa27.31■■□□□ 1.96
RNF180-201ENST00000296615 ZBTB7BO15156 539 aaPredicted RBP27.31■■□□□ 1.96
RNF180-201ENST00000296615 GIGYF1O75420 1035 aaPredicted RBP27.31■■□□□ 1.96
RNF180-201ENST00000296615 NECTIN2Q92692 538 aa27.31■■□□□ 1.96
RNF180-201ENST00000296615 CABP4P57796 275 aa27.3■■□□□ 1.96
RNF180-201ENST00000296615 ERVV-2B6SEH9 535 aa27.29■■□□□ 1.96
RNF180-201ENST00000296615 DDX54Q8TDD1 881 aaKnown RBP27.29■■□□□ 1.96
RNF180-201ENST00000296615 PLCH1Q4KWH8 1693 aa27.29■■□□□ 1.96
RNF180-201ENST00000296615 EIF2S2P20042 333 aaKnown RBP27.28■■□□□ 1.96
RNF180-201ENST00000296615 FLIIQ13045 1269 aa27.28■■□□□ 1.96
RNF180-201ENST00000296615 SLC39A6Q13433 755 aa27.27■■□□□ 1.96
RNF180-201ENST00000296615 RWDD1Q9H446 243 aaPredicted RBP27.27■■□□□ 1.96
RNF180-201ENST00000296615 TSHZ2Q9NRE2 1034 aa27.26■■□□□ 1.95
RNF180-201ENST00000296615 SHANK3Q9BYB0 1731 aa27.26■■□□□ 1.95
RNF180-201ENST00000296615 SLIT2O94813 1529 aa27.25■■□□□ 1.95
RNF180-201ENST00000296615 NRAPQ86VF7 1730 aa27.24■■□□□ 1.95
RNF180-201ENST00000296615 THRAP3Q9Y2W1 955 aaKnown RBP27.24■■□□□ 1.95
RNF180-201ENST00000296615 SPATA31A1Q5TZJ5 1347 aa27.23■■□□□ 1.95
RNF180-201ENST00000296615 FKBP5Q13451 457 aaPredicted RBP27.23■■□□□ 1.95
RNF180-201ENST00000296615 HDAC1Q13547 482 aaPredicted RBP27.23■■□□□ 1.95
RNF180-201ENST00000296615 TTC5Q8N0Z6 440 aa27.23■■□□□ 1.95
RNF180-201ENST00000296615 CDCA7Q9BWT1 371 aaPredicted RBP27.23■■□□□ 1.95
RNF180-201ENST00000296615 CHPF2Q9P2E5 772 aa27.23■■□□□ 1.95
RNF180-201ENST00000296615 DBF4Q9UBU7 674 aaPredicted RBP27.22■■□□□ 1.95
RNF180-201ENST00000296615 CCT4P50991 539 aaKnown RBP27.21■■□□□ 1.95
RNF180-201ENST00000296615 ZNF496Q96IT1 587 aaPredicted RBP27.21■■□□□ 1.95
RNF180-201ENST00000296615 NWD2Q9ULI1 1742 aa27.2■■□□□ 1.94
RNF180-201ENST00000296615 PRAMEF22A3QJZ6 481 aa27.2■■□□□ 1.94
RNF180-201ENST00000296615 F6X3S4 739 aa27.2■■□□□ 1.94
RNF180-201ENST00000296615 FMNL2Q96PY5 1086 aa27.2■■□□□ 1.94
RNF180-201ENST00000296615 PHAXQ9H814 394 aaKnown RBP27.2■■□□□ 1.94
RNF180-201ENST00000296615 CACNA1FO60840 1977 aa27.19■■□□□ 1.94
RNF180-201ENST00000296615 EXOC5O00471 708 aa27.19■■□□□ 1.94
RNF180-201ENST00000296615 SPATA31A5Q5VU36 1347 aa27.19■■□□□ 1.94
RNF180-201ENST00000296615 SPATA31A6Q5VVP1 1343 aa27.19■■□□□ 1.94
RNF180-201ENST00000296615 SPATA31A7Q8IWB4 1347 aa27.19■■□□□ 1.94
RNF180-201ENST00000296615 SNRPA1P09661 255 aaKnown RBP27.18■■□□□ 1.94
RNF180-201ENST00000296615 SLC4A10Q6U841 1118 aa27.18■■□□□ 1.94
RNF180-201ENST00000296615 UNC5CLQ8IV45 518 aa27.16■■□□□ 1.94
RNF180-201ENST00000296615 TNS2Q63HR2 1409 aa27.15■■□□□ 1.94
RNF180-201ENST00000296615 DDX21Q9NR30 783 aaKnown RBP eCLIP27.15■■□□□ 1.94
RNF180-201ENST00000296615 HYPKQ9NX55 129 aa27.15■■□□□ 1.94
RNF180-201ENST00000296615 PXDNLA1KZ92 1463 aa27.15■■□□□ 1.94
RNF180-201ENST00000296615 BARGINQ6ZT62 677 aa27.14■■□□□ 1.94
RNF180-201ENST00000296615 SKAP1Q86WV1 359 aa27.14■■□□□ 1.94
RNF180-201ENST00000296615 NGLY1Q96IV0 654 aa27.14■■□□□ 1.94
RNF180-201ENST00000296615 ANXA1P04083 346 aa27.13■■□□□ 1.93
RNF180-201ENST00000296615 C8orf37Q96NL8 207 aa27.13■■□□□ 1.93
RNF180-201ENST00000296615 C1orf115Q9H7X2 142 aa27.13■■□□□ 1.93
RNF180-201ENST00000296615 WNK3Q9BYP7 1800 aa27.13■■□□□ 1.93
RNF180-201ENST00000296615 PROSER3Q2NL68 480 aa27.13■■□□□ 1.93
RNF180-201ENST00000296615 TMOD3Q9NYL9 352 aa27.13■■□□□ 1.93
RNF180-201ENST00000296615 PDIA6Q15084 440 aa27.12■■□□□ 1.93
RNF180-201ENST00000296615 FNBP4Q8N3X1 1017 aaPredicted RBP27.11■■□□□ 1.93
RNF180-201ENST00000296615 MEIS3Q99687 375 aa27.11■■□□□ 1.93
RNF180-201ENST00000296615 CCDC9Q9Y3X0 531 aaKnown RBP27.11■■□□□ 1.93
RNF180-201ENST00000296615 HSPA1LP34931 641 aa27.1■■□□□ 1.93
RNF180-201ENST00000296615 USP16Q9Y5T5 823 aa27.1■■□□□ 1.93
RNF180-201ENST00000296615 TOGARAM1Q9Y4F4 1720 aa27.1■■□□□ 1.93
RNF180-201ENST00000296615 BCL9LQ86UU0 1499 aa27.1■■□□□ 1.93
Retrieved 100 of 20,778 RNA–protein pairs in 63.2 ms