RNA–Protein interactions for RNA: ENST00000296315.7

ARHGEF3-201, Transcript of Rho guanine nucleotide exchange factor 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ARHGEF3, Length 3,602 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGEF3-201ENST00000296315 RPAP2Q8IXW5 612 aaPredicted RBP12.39□□□□□ -0.43
ARHGEF3-201ENST00000296315 DUOX2Q9NRD8 1548 aa12.39□□□□□ -0.43
ARHGEF3-201ENST00000296315 STX6O43752 255 aa12.39□□□□□ -0.43
ARHGEF3-201ENST00000296315 SYT1P21579 422 aa12.39□□□□□ -0.43
ARHGEF3-201ENST00000296315 STK3Q13188 491 aa12.39□□□□□ -0.43
ARHGEF3-201ENST00000296315 POLKQ9UBT6 870 aa12.39□□□□□ -0.43
ARHGEF3-201ENST00000296315 MSH6P52701 1360 aa12.39□□□□□ -0.43
ARHGEF3-201ENST00000296315 ANKRD36BQ8N2N9 1353 aa12.39□□□□□ -0.43
ARHGEF3-201ENST00000296315 A0A087WWV3 80 aa12.38□□□□□ -0.43
ARHGEF3-201ENST00000296315 SULT6B1Q6IMI4 303 aa12.38□□□□□ -0.43
ARHGEF3-201ENST00000296315 NME9Q86XW9 330 aa12.38□□□□□ -0.43
ARHGEF3-201ENST00000296315 ST7Q9NRC1 585 aa12.38□□□□□ -0.43
ARHGEF3-201ENST00000296315 MCM2P49736 904 aa12.38□□□□□ -0.43
ARHGEF3-201ENST00000296315 KIAA1524Q8TCG1 905 aa12.38□□□□□ -0.43
ARHGEF3-201ENST00000296315 ARHGAP45Q92619 1136 aa12.38□□□□□ -0.43
ARHGEF3-201ENST00000296315 CDK19Q9BWU1 502 aa12.38□□□□□ -0.43
ARHGEF3-201ENST00000296315 ABCC4O15439 1325 aa12.38□□□□□ -0.43
ARHGEF3-201ENST00000296315 CCDC192P0DO97 292 aa12.38□□□□□ -0.43
ARHGEF3-201ENST00000296315 BICD2Q8TD16 824 aa12.38□□□□□ -0.43
ARHGEF3-201ENST00000296315 ARHGEF5Q12774 1597 aa12.37□□□□□ -0.43
ARHGEF3-201ENST00000296315 ZSCAN22P10073 491 aaPredicted RBP12.37□□□□□ -0.43
ARHGEF3-201ENST00000296315 CASTP20810 708 aaKnown RBP12.37□□□□□ -0.43
ARHGEF3-201ENST00000296315 LRRCC1Q9C099 1032 aa12.37□□□□□ -0.43
ARHGEF3-201ENST00000296315 PLCH2O75038 1416 aa12.37□□□□□ -0.43
ARHGEF3-201ENST00000296315 IL25Q9H293 177 aa12.37□□□□□ -0.43
ARHGEF3-201ENST00000296315 VGFO15240 615 aaPredicted RBP12.37□□□□□ -0.43
ARHGEF3-201ENST00000296315 AK2P54819 239 aa12.37□□□□□ -0.43
ARHGEF3-201ENST00000296315 UBE2HP62256 183 aa12.37□□□□□ -0.43
ARHGEF3-201ENST00000296315 WAPLQ7Z5K2 1190 aa12.37□□□□□ -0.43
ARHGEF3-201ENST00000296315 CERS3Q8IU89 383 aa12.37□□□□□ -0.43
ARHGEF3-201ENST00000296315 CHMLP26374 656 aa12.36□□□□□ -0.43
ARHGEF3-201ENST00000296315 GJB2P29033 226 aa12.36□□□□□ -0.43
ARHGEF3-201ENST00000296315 NCBP1Q09161 790 aaKnown RBP12.36□□□□□ -0.43
ARHGEF3-201ENST00000296315 UVSSAQ2YD98 709 aa12.36□□□□□ -0.43
ARHGEF3-201ENST00000296315 CHD1O14646 1710 aa12.36□□□□□ -0.43
ARHGEF3-201ENST00000296315 NCKAP5LQ9HCH0 1330 aa12.36□□□□□ -0.43
ARHGEF3-201ENST00000296315 SURF6O75683 361 aaKnown RBP12.36□□□□□ -0.43
ARHGEF3-201ENST00000296315 ARID5BQ14865 1188 aa12.36□□□□□ -0.43
ARHGEF3-201ENST00000296315 ANO6Q4KMQ2 910 aa12.36□□□□□ -0.43
ARHGEF3-201ENST00000296315 MYOM1P52179 1685 aa12.36□□□□□ -0.43
ARHGEF3-201ENST00000296315 TNMDQ9H2S6 317 aa12.35□□□□□ -0.43
ARHGEF3-201ENST00000296315 LAMC1P11047 1609 aa12.35□□□□□ -0.43
ARHGEF3-201ENST00000296315 PNMA6EA0A0J9YXQ4 647 aa12.35□□□□□ -0.43
ARHGEF3-201ENST00000296315 LMOD3Q0VAK6 560 aa12.35□□□□□ -0.43
ARHGEF3-201ENST00000296315 JAKMIP1Q96N16 626 aaKnown RBP12.35□□□□□ -0.43
ARHGEF3-201ENST00000296315 NUP62CLQ9H1M0 184 aa12.35□□□□□ -0.43
ARHGEF3-201ENST00000296315 ATP6V1DQ9Y5K8 247 aa12.35□□□□□ -0.43
ARHGEF3-201ENST00000296315 POLR3GO15318 223 aaPredicted RBP12.35□□□□□ -0.43
ARHGEF3-201ENST00000296315 LARGE1O95461 756 aa12.35□□□□□ -0.43
ARHGEF3-201ENST00000296315 F13A1P00488 732 aa12.35□□□□□ -0.43
ARHGEF3-201ENST00000296315 GTF3C6Q969F1 213 aa12.35□□□□□ -0.43
ARHGEF3-201ENST00000296315 STK31Q9BXU1 1019 aa12.35□□□□□ -0.43
ARHGEF3-201ENST00000296315 TSPYL4Q9UJ04 414 aa12.35□□□□□ -0.43
ARHGEF3-201ENST00000296315 GNAI2P04899 355 aa12.34□□□□□ -0.43
ARHGEF3-201ENST00000296315 LIG1P18858 919 aa12.34□□□□□ -0.43
ARHGEF3-201ENST00000296315 DNAJC25Q9H1X3 360 aa12.34□□□□□ -0.43
ARHGEF3-201ENST00000296315 OGFRQ9NZT2 677 aa12.34□□□□□ -0.43
ARHGEF3-201ENST00000296315 FANCAO15360 1455 aa12.34□□□□□ -0.43
ARHGEF3-201ENST00000296315 DACT1Q9NYF0 836 aa12.34□□□□□ -0.43
ARHGEF3-201ENST00000296315 MAP3K11Q16584 847 aa12.34□□□□□ -0.43
ARHGEF3-201ENST00000296315 FBXO31Q5XUX0 539 aaPredicted RBP12.34□□□□□ -0.43
ARHGEF3-201ENST00000296315 LARP1BQ659C4 914 aaKnown RBP12.34□□□□□ -0.43
ARHGEF3-201ENST00000296315 ERCC4Q92889 916 aaPredicted RBP12.34□□□□□ -0.43
ARHGEF3-201ENST00000296315 FMNL2Q96PY5 1086 aa12.34□□□□□ -0.43
ARHGEF3-201ENST00000296315 CLIP2Q9UDT6 1046 aa12.34□□□□□ -0.43
ARHGEF3-201ENST00000296315 LRRFIP2Q9Y608 721 aaKnown RBP12.34□□□□□ -0.43
ARHGEF3-201ENST00000296315 CFAP74Q9C0B2 1584 aa12.33□□□□□ -0.43
ARHGEF3-201ENST00000296315 CEP152O94986 1710 aa12.33□□□□□ -0.44
ARHGEF3-201ENST00000296315 IQGAP1P46940 1657 aa12.33□□□□□ -0.44
ARHGEF3-201ENST00000296315 GOLGA6L19H0YKK7 550 aa12.33□□□□□ -0.44
ARHGEF3-201ENST00000296315 PRPF40BQ6NWY9 871 aaKnown RBP12.33□□□□□ -0.44
ARHGEF3-201ENST00000296315 RASEFQ8IZ41 740 aa12.33□□□□□ -0.44
ARHGEF3-201ENST00000296315 CCDC9Q9Y3X0 531 aaKnown RBP12.33□□□□□ -0.44
ARHGEF3-201ENST00000296315 CLTCL1P53675 1640 aa12.33□□□□□ -0.44
ARHGEF3-201ENST00000296315 FOXO3O43524 673 aa12.33□□□□□ -0.44
ARHGEF3-201ENST00000296315 GTF2F1P35269 517 aaKnown RBP eCLIP12.33□□□□□ -0.44
ARHGEF3-201ENST00000296315 ZSCAN21Q9Y5A6 473 aaPredicted RBP12.33□□□□□ -0.44
ARHGEF3-201ENST00000296315 ADGRL1O94910 1474 aa12.33□□□□□ -0.44
ARHGEF3-201ENST00000296315 TYRO3Q06418 890 aa12.32□□□□□ -0.44
ARHGEF3-201ENST00000296315 ELF2Q15723 593 aa12.32□□□□□ -0.44
ARHGEF3-201ENST00000296315 TMEM51Q9NW97 253 aa12.32□□□□□ -0.44
ARHGEF3-201ENST00000296315 ZNF215Q9UL58 517 aaPredicted RBP12.32□□□□□ -0.44
ARHGEF3-201ENST00000296315 BECN2A8MW95 431 aa12.32□□□□□ -0.44
ARHGEF3-201ENST00000296315 EIF2S2P20042 333 aaKnown RBP12.32□□□□□ -0.44
ARHGEF3-201ENST00000296315 TNNT3P45378 269 aaPredicted RBP12.32□□□□□ -0.44
ARHGEF3-201ENST00000296315 CUL4AQ13619 759 aa12.32□□□□□ -0.44
ARHGEF3-201ENST00000296315 CEP135Q66GS9 1140 aa12.32□□□□□ -0.44
ARHGEF3-201ENST00000296315 DDX11Q96FC9 970 aa12.32□□□□□ -0.44
ARHGEF3-201ENST00000296315 CDC42BPBQ9Y5S2 1711 aa12.32□□□□□ -0.44
ARHGEF3-201ENST00000296315 IQGAP3Q86VI3 1631 aa12.32□□□□□ -0.44
ARHGEF3-201ENST00000296315 FAM177A1Q8N128 213 aaPredicted RBP12.31□□□□□ -0.44
ARHGEF3-201ENST00000296315 COG3Q96JB2 828 aa12.31□□□□□ -0.44
ARHGEF3-201ENST00000296315 TMX1Q9H3N1 280 aa12.31□□□□□ -0.44
ARHGEF3-201ENST00000296315 RNF17Q9BXT8 1623 aaKnown RBP12.31□□□□□ -0.44
ARHGEF3-201ENST00000296315 RTL1A6NKG5 1358 aa12.31□□□□□ -0.44
ARHGEF3-201ENST00000296315 SPTLC3Q9NUV7 552 aa12.31□□□□□ -0.44
ARHGEF3-201ENST00000296315 INTS4Q96HW7 963 aaKnown RBP12.31□□□□□ -0.44
ARHGEF3-201ENST00000296315 CBX8Q9HC52 389 aa12.31□□□□□ -0.44
ARHGEF3-201ENST00000296315 LIMCH1Q9UPQ0 1083 aa12.31□□□□□ -0.44
ARHGEF3-201ENST00000296315 UNC13BO14795 1591 aa12.31□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 12.6 ms