RNA–Protein interactions for RNA: ENST00000296302.11

PBRM1-201, Transcript of polybromo 1, humanhuman

TSL 1 (best) BASIC

Gene PBRM1, Length 5,145 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PBRM1-201ENST00000296302 RBM33Q96EV2 1170 aaKnown RBP12.89□□□□□ -0.35
PBRM1-201ENST00000296302 PLCD4Q9BRC7 762 aa12.89□□□□□ -0.35
PBRM1-201ENST00000296302 PRG4Q92954 1404 aaPredicted RBP12.89□□□□□ -0.35
PBRM1-201ENST00000296302 ABTB2Q8N961 1025 aa12.89□□□□□ -0.35
PBRM1-201ENST00000296302 AQRO60306 1485 aaKnown RBP eCLIP12.89□□□□□ -0.351e-6■■■□□ 17.7
PBRM1-201ENST00000296302 GOLGA6L9A6NEM1 432 aa12.88□□□□□ -0.35
PBRM1-201ENST00000296302 KIF4BQ2VIQ3 1234 aa12.88□□□□□ -0.35
PBRM1-201ENST00000296302 GIMAP7Q8NHV1 300 aa12.88□□□□□ -0.35
PBRM1-201ENST00000296302 HDAC1Q13547 482 aaPredicted RBP12.88□□□□□ -0.35
PBRM1-201ENST00000296302 IMMTQ16891 758 aaKnown RBP12.88□□□□□ -0.35
PBRM1-201ENST00000296302 CCDC57Q2TAC2 916 aa12.88□□□□□ -0.35
PBRM1-201ENST00000296302 SNX21Q969T3 373 aa12.88□□□□□ -0.35
PBRM1-201ENST00000296302 STX6O43752 255 aa12.88□□□□□ -0.35
PBRM1-201ENST00000296302 EIF5P55010 431 aaKnown RBP12.88□□□□□ -0.35
PBRM1-201ENST00000296302 ZKSCAN5Q9Y2L8 839 aa12.88□□□□□ -0.35
PBRM1-201ENST00000296302 TANGO6Q9C0B7 1094 aa12.88□□□□□ -0.35
PBRM1-201ENST00000296302 U3KPZ7 1027 aaPredicted RBP12.88□□□□□ -0.35
PBRM1-201ENST00000296302 STX1AQ16623 288 aa12.87□□□□□ -0.35
PBRM1-201ENST00000296302 CKAP2LQ8IYA6 745 aa12.87□□□□□ -0.35
PBRM1-201ENST00000296302 TAF4BQ92750 862 aa12.87□□□□□ -0.35
PBRM1-201ENST00000296302 SYTL4Q96C24 671 aaPredicted RBP12.87□□□□□ -0.35
PBRM1-201ENST00000296302 INCENPQ9NQS7 918 aa12.87□□□□□ -0.35
PBRM1-201ENST00000296302 CNNM1Q9NRU3 951 aa12.87□□□□□ -0.35
PBRM1-201ENST00000296302 POLR3GO15318 223 aaPredicted RBP12.87□□□□□ -0.35
PBRM1-201ENST00000296302 HMGB1P09429 215 aaKnown RBP12.87□□□□□ -0.35
PBRM1-201ENST00000296302 KIF6Q6ZMV9 814 aa12.87□□□□□ -0.35
PBRM1-201ENST00000296302 RPRD2Q5VT52 1461 aaKnown RBP12.87□□□□□ -0.35
PBRM1-201ENST00000296302 CCDC171Q6TFL3 1326 aa12.87□□□□□ -0.35
PBRM1-201ENST00000296302 KRT222Q8N1A0 295 aa12.87□□□□□ -0.35
PBRM1-201ENST00000296302 SLC52A1Q9NWF4 448 aa12.87□□□□□ -0.35
PBRM1-201ENST00000296302 CCDC141Q6ZP82 1450 aa12.87□□□□□ -0.35
PBRM1-201ENST00000296302 GTF2F1P35269 517 aaKnown RBP eCLIP12.87□□□□□ -0.35
PBRM1-201ENST00000296302 NOLC1Q14978 699 aaKnown RBP eCLIP12.87□□□□□ -0.35
PBRM1-201ENST00000296302 C8orf34Q49A92 452 aa12.87□□□□□ -0.35
PBRM1-201ENST00000296302 ZNF397Q8NF99 534 aaPredicted RBP12.87□□□□□ -0.35
PBRM1-201ENST00000296302 GNL3LQ9NVN8 582 aaKnown RBP12.87□□□□□ -0.35
PBRM1-201ENST00000296302 TRMT1Q9NXH9 659 aaKnown RBP12.87□□□□□ -0.35
PBRM1-201ENST00000296302 RBM27Q9P2N5 1060 aaKnown RBP12.87□□□□□ -0.35
PBRM1-201ENST00000296302 RTEL1-TNFRSF6BF6WH68 1400 aa12.87□□□□□ -0.35
PBRM1-201ENST00000296302 NEFHP12036 1026 aa12.86□□□□□ -0.35
PBRM1-201ENST00000296302 ZNF165P49910 485 aa12.86□□□□□ -0.35
PBRM1-201ENST00000296302 TIGD1Q96MW7 591 aa12.86□□□□□ -0.35
PBRM1-201ENST00000296302 MTMR7Q9Y216 660 aa12.86□□□□□ -0.35
PBRM1-201ENST00000296302 SNW1Q13573 536 aaKnown RBP12.86□□□□□ -0.35
PBRM1-201ENST00000296302 CEP135Q66GS9 1140 aa12.86□□□□□ -0.35
PBRM1-201ENST00000296302 PANK2Q9BZ23 570 aa12.86□□□□□ -0.35
PBRM1-201ENST00000296302 ZNF530Q6P9A1 599 aaPredicted RBP12.86□□□□□ -0.35
PBRM1-201ENST00000296302 NUP133Q8WUM0 1156 aa12.86□□□□□ -0.35
PBRM1-201ENST00000296302 SPDYE4A6NLX3 237 aa12.85□□□□□ -0.35
PBRM1-201ENST00000296302 GDPD2Q9HCC8 539 aa12.85□□□□□ -0.35
PBRM1-201ENST00000296302 CEP126Q9P2H0 1117 aa12.85□□□□□ -0.35
PBRM1-201ENST00000296302 MAPK8IP2Q13387 824 aaPredicted RBP12.85□□□□□ -0.35
PBRM1-201ENST00000296302 SEPT7Q16181 437 aaKnown RBP12.85□□□□□ -0.35
PBRM1-201ENST00000296302 MICALCLQ6ZW33 695 aa12.85□□□□□ -0.35
PBRM1-201ENST00000296302 TAX1BP1Q86VP1 789 aa12.85□□□□□ -0.35
PBRM1-201ENST00000296302 CCDC150Q8NCX0 1101 aa12.85□□□□□ -0.35
PBRM1-201ENST00000296302 SPA17Q15506 151 aa12.85□□□□□ -0.35
PBRM1-201ENST00000296302 ENOX2Q16206 610 aaKnown RBP12.85□□□□□ -0.35
PBRM1-201ENST00000296302 TTC22Q5TAA0 569 aa12.85□□□□□ -0.35
PBRM1-201ENST00000296302 ANKRD18AQ8IVF6 992 aa12.85□□□□□ -0.35
PBRM1-201ENST00000296302 FKBP4Q02790 459 aaKnown RBP eCLIP12.84□□□□□ -0.35
PBRM1-201ENST00000296302 NUCB1Q02818 461 aa12.84□□□□□ -0.35
PBRM1-201ENST00000296302 UBAC1Q9BSL1 405 aa12.84□□□□□ -0.35
PBRM1-201ENST00000296302 BMP2KQ9NSY1 1161 aaPredicted RBP12.84□□□□□ -0.35
PBRM1-201ENST00000296302 PTPRCP08575 1304 aa12.84□□□□□ -0.35
PBRM1-201ENST00000296302 IL16Q14005 1332 aa12.84□□□□□ -0.35
PBRM1-201ENST00000296302 HCLS1P14317 486 aaPredicted RBP12.84□□□□□ -0.35
PBRM1-201ENST00000296302 C8orf76Q96K31 380 aa12.84□□□□□ -0.35
PBRM1-201ENST00000296302 THUMPD2Q9BTF0 503 aaKnown RBP12.84□□□□□ -0.35
PBRM1-201ENST00000296302 GTPBP4Q9BZE4 634 aaKnown RBP12.84□□□□□ -0.35
PBRM1-201ENST00000296302 GJB2P29033 226 aa12.83□□□□□ -0.35
PBRM1-201ENST00000296302 STK11IPQ8N1F8 1099 aa12.83□□□□□ -0.36
PBRM1-201ENST00000296302 FSIP1Q8NA03 581 aa12.83□□□□□ -0.36
PBRM1-201ENST00000296302 SMARCC1Q92922 1105 aaPredicted RBP12.83□□□□□ -0.36
PBRM1-201ENST00000296302 EPRSP07814 1512 aaKnown RBP12.83□□□□□ -0.36
PBRM1-201ENST00000296302 TATP17735 454 aaPredicted RBP12.83□□□□□ -0.36
PBRM1-201ENST00000296302 SOGA3Q5TF21 947 aa12.83□□□□□ -0.36
PBRM1-201ENST00000296302 PTPN23Q9H3S7 1636 aa12.83□□□□□ -0.36
PBRM1-201ENST00000296302 TMC6Q7Z403 805 aa12.83□□□□□ -0.36
PBRM1-201ENST00000296302 RRS1Q15050 365 aaKnown RBP12.82□□□□□ -0.36
PBRM1-201ENST00000296302 TXNDC2Q86VQ3 553 aa12.82□□□□□ -0.36
PBRM1-201ENST00000296302 TMX3Q96JJ7 454 aa12.82□□□□□ -0.36
PBRM1-201ENST00000296302 GNAT3A8MTJ3 354 aa12.82□□□□□ -0.36
PBRM1-201ENST00000296302 TUBB4AP04350 444 aa12.82□□□□□ -0.36
PBRM1-201ENST00000296302 PCF11O94913 1555 aaKnown RBP12.82□□□□□ -0.36
PBRM1-201ENST00000296302 UTP3Q9NQZ2 479 aaKnown RBP eCLIP12.82□□□□□ -0.363e-10■■■■■ 153.8
PBRM1-201ENST00000296302 ZSCAN22P10073 491 aaPredicted RBP12.81□□□□□ -0.36
PBRM1-201ENST00000296302 SMC5Q8IY18 1101 aa12.81□□□□□ -0.36
PBRM1-201ENST00000296302 CCDC94Q9BW85 323 aaPredicted RBP12.81□□□□□ -0.36
PBRM1-201ENST00000296302 PHAXQ9H814 394 aaKnown RBP12.81□□□□□ -0.36
PBRM1-201ENST00000296302 NSD2O96028 1365 aa12.81□□□□□ -0.36
PBRM1-201ENST00000296302 TRERF1Q96PN7 1200 aa12.81□□□□□ -0.36
PBRM1-201ENST00000296302 PAFAH1B1P43034 410 aa12.81□□□□□ -0.36
PBRM1-201ENST00000296302 RAB3GAP1Q15042 981 aa12.81□□□□□ -0.36
PBRM1-201ENST00000296302 FAM200AQ8TCP9 573 aa12.81□□□□□ -0.36
PBRM1-201ENST00000296302 ARHGAP45Q92619 1136 aa12.81□□□□□ -0.36
PBRM1-201ENST00000296302 BTBD11A6QL63 1104 aa12.81□□□□□ -0.36
PBRM1-201ENST00000296302 TDO2P48775 406 aa12.81□□□□□ -0.36
PBRM1-201ENST00000296302 IKQ13123 557 aaPredicted RBP12.81□□□□□ -0.36
PBRM1-201ENST00000296302 ABCC5O15440 1437 aa12.81□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 8.3 ms