RNA–Protein interactions for RNA: ENST00000296273.6

RFC4-201, Transcript of replication factor C subunit 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RFC4, Length 1,384 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFC4-201ENST00000296273 PHKG2P15735 406 aa14.57□□□□□ -0.08
RFC4-201ENST00000296273 EYA1Q99502 592 aa14.57□□□□□ -0.08
RFC4-201ENST00000296273 ASAP1Q9ULH1 1129 aa14.56□□□□□ -0.08
RFC4-201ENST00000296273 ITPK1Q13572 414 aa14.55□□□□□ -0.08
RFC4-201ENST00000296273 ZNF526Q8TF50 670 aaPredicted RBP14.55□□□□□ -0.08
RFC4-201ENST00000296273 CICQ96RK0 1608 aaPredicted RBP14.54□□□□□ -0.08
RFC4-201ENST00000296273 TGFB2P61812 414 aa14.54□□□□□ -0.08
RFC4-201ENST00000296273 SMIM5Q71RC9 77 aa14.54□□□□□ -0.08
RFC4-201ENST00000296273 NLGN1Q8N2Q7 840 aa14.54□□□□□ -0.08
RFC4-201ENST00000296273 POLKQ9UBT6 870 aa14.54□□□□□ -0.08
RFC4-201ENST00000296273 RTCBQ9Y3I0 505 aaKnown RBP14.54□□□□□ -0.08
RFC4-201ENST00000296273 HSP90AB1P08238 724 aaKnown RBP14.53□□□□□ -0.08
RFC4-201ENST00000296273 MMP10P09238 476 aa14.53□□□□□ -0.08
RFC4-201ENST00000296273 TRAPPC3LQ5T215 181 aa14.53□□□□□ -0.08
RFC4-201ENST00000296273 ATG3Q9NT62 314 aa14.53□□□□□ -0.08
RFC4-201ENST00000296273 ERVV-2B6SEH9 535 aa14.52□□□□□ -0.08
RFC4-201ENST00000296273 RC3H1Q5TC82 1133 aaKnown RBP14.52□□□□□ -0.08
RFC4-201ENST00000296273 WWC3Q9ULE0 1092 aa14.52□□□□□ -0.08
RFC4-201ENST00000296273 CEP350Q5VT06 3117 aa14.52□□□□□ -0.08
RFC4-201ENST00000296273 ZNF831Q5JPB2 1677 aa14.52□□□□□ -0.09
RFC4-201ENST00000296273 KDRP35968 1356 aa14.51□□□□□ -0.09
RFC4-201ENST00000296273 KIF3CO14782 793 aa14.51□□□□□ -0.09
RFC4-201ENST00000296273 DCAF5Q96JK2 942 aa14.51□□□□□ -0.09
RFC4-201ENST00000296273 PXDNLA1KZ92 1463 aa14.51□□□□□ -0.09
RFC4-201ENST00000296273 KIF13BQ9NQT8 1826 aa14.5□□□□□ -0.09
RFC4-201ENST00000296273 EIF4A2Q14240 407 aaKnown RBP14.5□□□□□ -0.09
RFC4-201ENST00000296273 CCDC87Q9NVE4 849 aa14.5□□□□□ -0.09
RFC4-201ENST00000296273 C10orf71Q711Q0 1435 aa14.49□□□□□ -0.09
RFC4-201ENST00000296273 DIEXFQ68CQ4 756 aaKnown RBP14.49□□□□□ -0.09
RFC4-201ENST00000296273 BCS1LQ9Y276 419 aa14.49□□□□□ -0.09
RFC4-201ENST00000296273 CNTNAP4Q9C0A0 1308 aa14.49□□□□□ -0.09
RFC4-201ENST00000296273 RFC4P35249 363 aa14.48□□□□□ -0.09
RFC4-201ENST00000296273 AMOTQ4VCS5 1084 aa14.48□□□□□ -0.09
RFC4-201ENST00000296273 PLEKHO1Q53GL0 409 aaPredicted RBP14.48□□□□□ -0.09
RFC4-201ENST00000296273 ARHGEF1Q92888 912 aaKnown RBP14.48□□□□□ -0.09
RFC4-201ENST00000296273 RBM42Q9BTD8 480 aaKnown RBP14.48□□□□□ -0.09
RFC4-201ENST00000296273 RPS6KA4O75676 772 aa14.47□□□□□ -0.09
RFC4-201ENST00000296273 TOMM70O94826 608 aa14.47□□□□□ -0.09
RFC4-201ENST00000296273 APLP1P51693 650 aa14.47□□□□□ -0.09
RFC4-201ENST00000296273 SLC4A9Q96Q91 983 aa14.47□□□□□ -0.09
RFC4-201ENST00000296273 PARP3Q9Y6F1 533 aa14.47□□□□□ -0.09
RFC4-201ENST00000296273 KIAA1551Q9HCM1 1747 aa14.47□□□□□ -0.09
RFC4-201ENST00000296273 GYS1P13807 737 aa14.47□□□□□ -0.09
RFC4-201ENST00000296273 CABP4P57796 275 aa14.47□□□□□ -0.09
RFC4-201ENST00000296273 C4AP0C0L4 1744 aa14.46□□□□□ -0.09
RFC4-201ENST00000296273 COL5A3P25940 1745 aaPredicted RBP14.46□□□□□ -0.09
RFC4-201ENST00000296273 A0A0G2JLW4 131 aa14.46□□□□□ -0.1
RFC4-201ENST00000296273 TNNT2P45379 298 aaPredicted RBP14.46□□□□□ -0.1
RFC4-201ENST00000296273 N4BP2Q86UW6 1770 aaPredicted RBP14.45□□□□□ -0.1
RFC4-201ENST00000296273 FCHSD2O94868 740 aa14.45□□□□□ -0.1
RFC4-201ENST00000296273 ARHGAP27Q6ZUM4 889 aa14.45□□□□□ -0.1
RFC4-201ENST00000296273 DPEP1P16444 411 aa14.44□□□□□ -0.1
RFC4-201ENST00000296273 C1orf141Q5JVX7 400 aa14.44□□□□□ -0.1
RFC4-201ENST00000296273 ZNF530Q6P9A1 599 aaPredicted RBP14.44□□□□□ -0.1
RFC4-201ENST00000296273 POLR3GLQ9BT43 218 aa14.44□□□□□ -0.1
RFC4-201ENST00000296273 KDM6AO15550 1401 aaPredicted RBP14.44□□□□□ -0.1
RFC4-201ENST00000296273 MTHFSP49914 203 aa14.43□□□□□ -0.1
RFC4-201ENST00000296273 PIM2Q9P1W9 311 aa14.42□□□□□ -0.1
RFC4-201ENST00000296273 KCNA3P22001 575 aa14.41□□□□□ -0.1
RFC4-201ENST00000296273 CRKLP46109 303 aaKnown RBP14.41□□□□□ -0.1
RFC4-201ENST00000296273 POTEDQ86YR6 584 aa14.41□□□□□ -0.1
RFC4-201ENST00000296273 BRCA1P38398 1863 aaKnown RBP14.41□□□□□ -0.1
RFC4-201ENST00000296273 USP42Q9H9J4 1324 aaKnown RBP14.4□□□□□ -0.1
RFC4-201ENST00000296273 PTCD1O75127 700 aaKnown RBP14.4□□□□□ -0.1
RFC4-201ENST00000296273 C16orf71Q8IYS4 520 aaPredicted RBP14.4□□□□□ -0.1
RFC4-201ENST00000296273 NFATC2IPQ8NCF5 419 aa14.4□□□□□ -0.1
RFC4-201ENST00000296273 RBM46Q8TBY0 533 aaKnown RBP14.4□□□□□ -0.1
RFC4-201ENST00000296273 ARFGEF1Q9Y6D6 1849 aa14.39□□□□□ -0.11
RFC4-201ENST00000296273 DALRD3Q5D0E6 543 aaKnown RBP14.39□□□□□ -0.11
RFC4-201ENST00000296273 C9orf131Q5VYM1 1079 aa14.39□□□□□ -0.11
RFC4-201ENST00000296273 DNAJC5GQ8N7S2 189 aa14.39□□□□□ -0.11
RFC4-201ENST00000296273 PANK3Q9H999 370 aa14.39□□□□□ -0.11
RFC4-201ENST00000296273 NMRK2Q9NPI5 230 aa14.39□□□□□ -0.11
RFC4-201ENST00000296273 KDM2BQ8NHM5 1336 aa14.38□□□□□ -0.11
RFC4-201ENST00000296273 EIF4G2P78344 907 aaKnown RBP eCLIP14.38□□□□□ -0.11
RFC4-201ENST00000296273 MORC1Q86VD1 984 aa14.38□□□□□ -0.11
RFC4-201ENST00000296273 MYH14Q7Z406 1995 aaKnown RBP14.38□□□□□ -0.11
RFC4-201ENST00000296273 FSTL1Q12841 308 aa14.37□□□□□ -0.11
RFC4-201ENST00000296273 FKBP8Q14318 412 aa14.37□□□□□ -0.11
RFC4-201ENST00000296273 AEBP1Q8IUX7 1158 aa14.37□□□□□ -0.11
RFC4-201ENST00000296273 SULT6B1Q6IMI4 303 aa14.36□□□□□ -0.11
RFC4-201ENST00000296273 SRP68Q9UHB9 627 aaKnown RBP14.36□□□□□ -0.11
RFC4-201ENST00000296273 TJP1Q07157 1748 aa14.36□□□□□ -0.11
RFC4-201ENST00000296273 ZPR1O75312 459 aa14.35□□□□□ -0.11
RFC4-201ENST00000296273 TM4SF1P30408 202 aa14.35□□□□□ -0.11
RFC4-201ENST00000296273 DDR1Q08345 913 aa14.35□□□□□ -0.11
RFC4-201ENST00000296273 AKAP4Q5JQC9 854 aa14.35□□□□□ -0.11
RFC4-201ENST00000296273 RNF181Q9P0P0 153 aa14.35□□□□□ -0.11
RFC4-201ENST00000296273 ZC3H4Q9UPT8 1303 aaKnown RBP14.35□□□□□ -0.11
RFC4-201ENST00000296273 POLRMTO00411 1230 aaKnown RBP14.34□□□□□ -0.11
RFC4-201ENST00000296273 INTS5Q6P9B9 1019 aaKnown RBP14.34□□□□□ -0.11
RFC4-201ENST00000296273 WDR90Q96KV7 1748 aa14.34□□□□□ -0.11
RFC4-201ENST00000296273 SCN11AQ9UI33 1791 aa14.34□□□□□ -0.11
RFC4-201ENST00000296273 IL13P35225 146 aa14.34□□□□□ -0.11
RFC4-201ENST00000296273 SLC52A2Q9HAB3 445 aa14.34□□□□□ -0.11
RFC4-201ENST00000296273 KNSTRNQ9Y448 316 aa14.34□□□□□ -0.11
RFC4-201ENST00000296273 KCPQ6ZWJ8 1503 aa14.33□□□□□ -0.11
RFC4-201ENST00000296273 SOS1Q07889 1333 aaPredicted RBP14.33□□□□□ -0.12
RFC4-201ENST00000296273 ADAMTS7Q9UKP4 1686 aa14.33□□□□□ -0.12
RFC4-201ENST00000296273 HSPA5P11021 654 aaKnown RBP14.33□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms