RNA–Protein interactions for RNA: ENST00000295971.11

RBM47-201, Transcript of RNA binding motif protein 47, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene RBM47, Length 4,056 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBM47-201ENST00000295971 LETM1O95202 739 aaPredicted RBP16.09■□□□□ 0.17
RBM47-201ENST00000295971 RIMS2Q9UQ26 1411 aa16.09■□□□□ 0.17
RBM47-201ENST00000295971 CROCC2H7BZ55 1655 aa16.09■□□□□ 0.17
RBM47-201ENST00000295971 NPHP1O15259 732 aa16.09■□□□□ 0.17
RBM47-201ENST00000295971 CCDC73Q6ZRK6 1079 aa16.09■□□□□ 0.17
RBM47-201ENST00000295971 PI4KAP2A4QPH2 592 aa16.08■□□□□ 0.17
RBM47-201ENST00000295971 KRT85P78386 507 aa16.08■□□□□ 0.17
RBM47-201ENST00000295971 PI4KAP1Q8N8J0 262 aa16.08■□□□□ 0.17
RBM47-201ENST00000295971 DNAAF4Q8WXU2 420 aa16.08■□□□□ 0.17
RBM47-201ENST00000295971 HIP1O00291 1037 aa16.08■□□□□ 0.16
RBM47-201ENST00000295971 APPP05067 770 aa16.08■□□□□ 0.16
RBM47-201ENST00000295971 ESYT1Q9BSJ8 1104 aa16.08■□□□□ 0.16
RBM47-201ENST00000295971 UQCRHLA0A096LP55 91 aa16.07■□□□□ 0.16
RBM47-201ENST00000295971 RAB11FIP3O75154 756 aa16.07■□□□□ 0.16
RBM47-201ENST00000295971 UQCRHP07919 91 aa16.07■□□□□ 0.16
RBM47-201ENST00000295971 NCBP3Q53F19 620 aaKnown RBP16.07■□□□□ 0.16
RBM47-201ENST00000295971 BOLA2Q9H3K6 86 aa16.07■□□□□ 0.16
RBM47-201ENST00000295971 WASHC4Q2M389 1173 aa16.07■□□□□ 0.16
RBM47-201ENST00000295971 ERCC6L2Q5T890 1561 aa16.07■□□□□ 0.16
RBM47-201ENST00000295971 IQGAP3Q86VI3 1631 aa16.07■□□□□ 0.16
RBM47-201ENST00000295971 CCDC8Q9H0W5 538 aaPredicted RBP16.06■□□□□ 0.16
RBM47-201ENST00000295971 ANTXR1Q9H6X2 564 aa16.06■□□□□ 0.16
RBM47-201ENST00000295971 CCDC192P0DO97 292 aa16.06■□□□□ 0.16
RBM47-201ENST00000295971 PRKCSHP14314 528 aaPredicted RBP16.06■□□□□ 0.16
RBM47-201ENST00000295971 USP25Q9UHP3 1055 aa16.06■□□□□ 0.16
RBM47-201ENST00000295971 PRIM1P49642 420 aaKnown RBP16.06■□□□□ 0.16
RBM47-201ENST00000295971 SDF4Q9BRK5 362 aa16.06■□□□□ 0.16
RBM47-201ENST00000295971 MSH6P52701 1360 aa16.06■□□□□ 0.16
RBM47-201ENST00000295971 ZC3H6P61129 1189 aaKnown RBP16.05■□□□□ 0.16
RBM47-201ENST00000295971 LIMCH1Q9UPQ0 1083 aa16.05■□□□□ 0.16
RBM47-201ENST00000295971 RHPN1Q8TCX5 695 aa16.05■□□□□ 0.16
RBM47-201ENST00000295971 RRP9O43818 475 aaKnown RBP16.04■□□□□ 0.16
RBM47-201ENST00000295971 TNMDQ9H2S6 317 aa16.04■□□□□ 0.16
RBM47-201ENST00000295971 MYOM2P54296 1465 aa16.04■□□□□ 0.16
RBM47-201ENST00000295971 CAMK4Q16566 473 aa16.04■□□□□ 0.16
RBM47-201ENST00000295971 GSPT1P15170 499 aaKnown RBP16.03■□□□□ 0.16
RBM47-201ENST00000295971 LRRFIP1Q32MZ4 808 aaKnown RBP16.03■□□□□ 0.16
RBM47-201ENST00000295971 DDX11Q96FC9 970 aa16.03■□□□□ 0.16
RBM47-201ENST00000295971 ZSCAN31Q96LW9 406 aaPredicted RBP16.03■□□□□ 0.16
RBM47-201ENST00000295971 PPP6R1Q9UPN7 881 aa16.03■□□□□ 0.16
RBM47-201ENST00000295971 MAP3K19Q56UN5 1328 aa16.03■□□□□ 0.16
RBM47-201ENST00000295971 KDM4AO75164 1064 aa16.03■□□□□ 0.16
RBM47-201ENST00000295971 ATP8B2P98198 1209 aa16.03■□□□□ 0.16
RBM47-201ENST00000295971 CPLX2Q6PUV4 134 aaKnown RBP16.03■□□□□ 0.16
RBM47-201ENST00000295971 EYA1Q99502 592 aa16.03■□□□□ 0.16
RBM47-201ENST00000295971 CHL1O00533 1208 aa16.03■□□□□ 0.16
RBM47-201ENST00000295971 UHRF1BP1LA0JNW5 1464 aa16.02■□□□□ 0.16
RBM47-201ENST00000295971 CREBRFQ8IUR6 639 aa16.02■□□□□ 0.16
RBM47-201ENST00000295971 CHMP4CQ96CF2 233 aa16.02■□□□□ 0.16
RBM47-201ENST00000295971 TRDNQ13061 729 aa16.02■□□□□ 0.16
RBM47-201ENST00000295971 RALYLQ86SE5 291 aaKnown RBP16.02■□□□□ 0.16
RBM47-201ENST00000295971 SPATA32Q96LK8 384 aa16.02■□□□□ 0.16
RBM47-201ENST00000295971 FMNL2Q96PY5 1086 aa16.02■□□□□ 0.16
RBM47-201ENST00000295971 POLR1AO95602 1720 aaPredicted RBP16.02■□□□□ 0.15
RBM47-201ENST00000295971 CDC42BPBQ9Y5S2 1711 aa16.02■□□□□ 0.15
RBM47-201ENST00000295971 ANKRD1Q15327 319 aa16.02■□□□□ 0.15
RBM47-201ENST00000295971 PHF8Q9UPP1 1060 aa16.02■□□□□ 0.15
RBM47-201ENST00000295971 STX6O43752 255 aa16.01■□□□□ 0.15
RBM47-201ENST00000295971 CD2BP2O95400 341 aaKnown RBP16.01■□□□□ 0.15
RBM47-201ENST00000295971 CCDC183Q5T5S1 534 aa16.01■□□□□ 0.15
RBM47-201ENST00000295971 MAP7D2Q96T17 732 aa16.01■□□□□ 0.15
RBM47-201ENST00000295971 NUP62CLQ9H1M0 184 aa16.01■□□□□ 0.15
RBM47-201ENST00000295971 ECHDC1Q9NTX5 307 aa16.01■□□□□ 0.15
RBM47-201ENST00000295971 UNC13BO14795 1591 aa16.01■□□□□ 0.15
RBM47-201ENST00000295971 PLXNC1O60486 1568 aa16.01■□□□□ 0.15
RBM47-201ENST00000295971 KINO60870 393 aaKnown RBP16.01■□□□□ 0.15
RBM47-201ENST00000295971 LRSAM1Q6UWE0 723 aa16.01■□□□□ 0.15
RBM47-201ENST00000295971 CHPF2Q9P2E5 772 aa16.01■□□□□ 0.15
RBM47-201ENST00000295971 DBF4Q9UBU7 674 aaPredicted RBP16.01■□□□□ 0.15
RBM47-201ENST00000295971 HMGN5P82970 282 aaKnown RBP16.01■□□□□ 0.15
RBM47-201ENST00000295971 PIK3R4Q99570 1358 aa16.01■□□□□ 0.15
RBM47-201ENST00000295971 CLTCL1P53675 1640 aa16.01■□□□□ 0.15
RBM47-201ENST00000295971 ABCC4O15439 1325 aa16.01■□□□□ 0.15
RBM47-201ENST00000295971 TATP17735 454 aaPredicted RBP16■□□□□ 0.15
RBM47-201ENST00000295971 SYNE3Q6ZMZ3 975 aa16■□□□□ 0.15
RBM47-201ENST00000295971 POGZQ7Z3K3 1410 aa16■□□□□ 0.15
RBM47-201ENST00000295971 HCLS1P14317 486 aaPredicted RBP16■□□□□ 0.15
RBM47-201ENST00000295971 PROSER2Q86WR7 435 aaPredicted RBP16■□□□□ 0.15
RBM47-201ENST00000295971 TCEANC2Q96MN5 208 aa16■□□□□ 0.15
RBM47-201ENST00000295971 EVA1CP58658 441 aa16■□□□□ 0.15
RBM47-201ENST00000295971 PHF23Q9BUL5 403 aaPredicted RBP16■□□□□ 0.15
RBM47-201ENST00000295971 MAP3K2Q9Y2U5 619 aa16■□□□□ 0.15
RBM47-201ENST00000295971 ATF3P18847 181 aa15.99■□□□□ 0.15
RBM47-201ENST00000295971 CHMLP26374 656 aa15.99■□□□□ 0.15
RBM47-201ENST00000295971 ZMYM3Q14202 1370 aa15.99■□□□□ 0.15
RBM47-201ENST00000295971 ZFYVE16Q7Z3T8 1539 aa15.99■□□□□ 0.15
RBM47-201ENST00000295971 PHAXQ9H814 394 aaKnown RBP15.99■□□□□ 0.15
RBM47-201ENST00000295971 TFIP11Q9UBB9 837 aaKnown RBP15.99■□□□□ 0.15
RBM47-201ENST00000295971 EDC4Q6P2E9 1401 aaKnown RBP15.99■□□□□ 0.15
RBM47-201ENST00000295971 GJB2P29033 226 aa15.99■□□□□ 0.15
RBM47-201ENST00000295971 TNRQ92752 1358 aa15.98■□□□□ 0.15
RBM47-201ENST00000295971 NECAB1Q8N987 351 aa15.98■□□□□ 0.15
RBM47-201ENST00000295971 TPD52L1Q16890 204 aaPredicted RBP15.98■□□□□ 0.15
RBM47-201ENST00000295971 HOMER1Q86YM7 354 aa15.98■□□□□ 0.15
RBM47-201ENST00000295971 SYTL4Q96C24 671 aaPredicted RBP15.98■□□□□ 0.15
RBM47-201ENST00000295971 ME1P48163 572 aa15.98■□□□□ 0.15
RBM47-201ENST00000295971 PKP1Q13835 747 aa15.98■□□□□ 0.15
RBM47-201ENST00000295971 MAP3K11Q16584 847 aa15.98■□□□□ 0.15
RBM47-201ENST00000295971 NFXL1Q6ZNB6 911 aa15.98■□□□□ 0.15
RBM47-201ENST00000295971 USP48Q86UV5 1035 aa15.98■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 48.9 ms