RNA–Protein interactions for RNA: ENST00000291552.8

U2AF1-201, Transcript of U2 small nuclear RNA auxiliary factor 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene U2AF1, Length 962 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
U2AF1-201ENST00000291552 ZNF530Q6P9A1 599 aaPredicted RBP34.44■■■■□ 3.1
U2AF1-201ENST00000291552 FLAD1Q8NFF5 587 aa34.43■■■■□ 3.1
U2AF1-201ENST00000291552 SCN11AQ9UI33 1791 aa34.43■■■■□ 3.1
U2AF1-201ENST00000291552 HMGB2P26583 209 aaKnown RBP34.42■■■■□ 3.1
U2AF1-201ENST00000291552 VIRMAQ69YN4 1812 aaKnown RBP34.41■■■■□ 3.1
U2AF1-201ENST00000291552 SULT6B1Q6IMI4 303 aa34.41■■■■□ 3.1
U2AF1-201ENST00000291552 DCAF5Q96JK2 942 aa34.41■■■■□ 3.1
U2AF1-201ENST00000291552 ERVV-2B6SEH9 535 aa34.4■■■■□ 3.1
U2AF1-201ENST00000291552 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP34.39■■■■□ 3.1
U2AF1-201ENST00000291552 PHF14O94880 888 aa34.39■■■■□ 3.1
U2AF1-201ENST00000291552 AMOTQ4VCS5 1084 aa34.39■■■■□ 3.1
U2AF1-201ENST00000291552 SLC4A9Q96Q91 983 aa34.39■■■■□ 3.1
U2AF1-201ENST00000291552 HSP90AB1P08238 724 aaKnown RBP34.38■■■■□ 3.09
U2AF1-201ENST00000291552 ATP6V1AP38606 617 aa34.37■■■■□ 3.09
U2AF1-201ENST00000291552 MTHFSP49914 203 aa34.36■■■■□ 3.09
U2AF1-201ENST00000291552 MYH14Q7Z406 1995 aaKnown RBP34.36■■■■□ 3.09
U2AF1-201ENST00000291552 SSFA2P28290 1259 aa34.35■■■■□ 3.09
U2AF1-201ENST00000291552 GPR162Q16538 588 aa34.34■■■■□ 3.09
U2AF1-201ENST00000291552 CC2D1BQ5T0F9 858 aaKnown RBP34.34■■■■□ 3.09
U2AF1-201ENST00000291552 GNPATO15228 680 aa34.32■■■■□ 3.08
U2AF1-201ENST00000291552 COL3A1P02461 1466 aaPredicted RBP34.32■■■■□ 3.08
U2AF1-201ENST00000291552 CICQ96RK0 1608 aaPredicted RBP34.31■■■■□ 3.08
U2AF1-201ENST00000291552 TJP1Q07157 1748 aa34.31■■■■□ 3.08
U2AF1-201ENST00000291552 C1orf141Q5JVX7 400 aa34.3■■■■□ 3.08
U2AF1-201ENST00000291552 NPC1L1Q9UHC9 1359 aa34.3■■■■□ 3.08
U2AF1-201ENST00000291552 CABP4P57796 275 aa34.29■■■■□ 3.08
U2AF1-201ENST00000291552 RBM42Q9BTD8 480 aaKnown RBP34.29■■■■□ 3.08
U2AF1-201ENST00000291552 C4AP0C0L4 1744 aa34.29■■■■□ 3.08
U2AF1-201ENST00000291552 PELP1Q8IZL8 1130 aaKnown RBP34.28■■■■□ 3.08
U2AF1-201ENST00000291552 ZNF784Q8NCA9 323 aaPredicted RBP34.28■■■■□ 3.08
U2AF1-201ENST00000291552 ADAMTS7Q9UKP4 1686 aa34.28■■■■□ 3.08
U2AF1-201ENST00000291552 YBX3P16989 372 aaKnown RBP eCLIP34.27■■■■□ 3.08
U2AF1-201ENST00000291552 MRC1P22897 1456 aa34.26■■■■□ 3.07
U2AF1-201ENST00000291552 HMOX1P09601 288 aa34.25■■■■□ 3.07
U2AF1-201ENST00000291552 CD2APQ9Y5K6 639 aa34.25■■■■□ 3.07
U2AF1-201ENST00000291552 NFATC2IPQ8NCF5 419 aa34.23■■■■□ 3.07
U2AF1-201ENST00000291552 CNTNAP4Q9C0A0 1308 aa34.23■■■■□ 3.07
U2AF1-201ENST00000291552 KIF13BQ9NQT8 1826 aa34.21■■■■□ 3.07
U2AF1-201ENST00000291552 AKAP4Q5JQC9 854 aa34.21■■■■□ 3.07
U2AF1-201ENST00000291552 DIAPH1O60610 1272 aaKnown RBP34.2■■■■□ 3.07
U2AF1-201ENST00000291552 RC3H1Q5TC82 1133 aaKnown RBP34.2■■■■□ 3.07
U2AF1-201ENST00000291552 KIAA1551Q9HCM1 1747 aa34.2■■■■□ 3.07
U2AF1-201ENST00000291552 PTCD1O75127 700 aaKnown RBP34.19■■■■□ 3.06
U2AF1-201ENST00000291552 CNGB1Q14028 1251 aaPredicted RBP34.18■■■■□ 3.06
U2AF1-201ENST00000291552 LGR6Q9HBX8 967 aa34.18■■■■□ 3.06
U2AF1-201ENST00000291552 RTCBQ9Y3I0 505 aaKnown RBP34.18■■■■□ 3.06
U2AF1-201ENST00000291552 MTHFSDQ2M296 383 aaKnown RBP34.15■■■■□ 3.06
U2AF1-201ENST00000291552 RPS6KA4O75676 772 aa34.14■■■■□ 3.06
U2AF1-201ENST00000291552 TRAPPC3LQ5T215 181 aa34.14■■■■□ 3.06
U2AF1-201ENST00000291552 SLC52A2Q9HAB3 445 aa34.14■■■■□ 3.06
U2AF1-201ENST00000291552 RNMTO43148 476 aaKnown RBP34.13■■■■□ 3.05
U2AF1-201ENST00000291552 ARHGEF1Q92888 912 aaKnown RBP34.13■■■■□ 3.05
U2AF1-201ENST00000291552 KCPQ6ZWJ8 1503 aa34.13■■■■□ 3.05
U2AF1-201ENST00000291552 UBR2Q8IWV8 1755 aa34.13■■■■□ 3.05
U2AF1-201ENST00000291552 MMP10P09238 476 aa34.12■■■■□ 3.05
U2AF1-201ENST00000291552 ADRA2BP18089 450 aa34.12■■■■□ 3.05
U2AF1-201ENST00000291552 N4BP2Q86UW6 1770 aaPredicted RBP34.11■■■■□ 3.05
U2AF1-201ENST00000291552 GRIN3BO60391 1043 aa34.1■■■■□ 3.05
U2AF1-201ENST00000291552 CRKLP46109 303 aaKnown RBP34.1■■■■□ 3.05
U2AF1-201ENST00000291552 SIPA1L3O60292 1781 aaPredicted RBP34.09■■■■□ 3.05
U2AF1-201ENST00000291552 GYS1P13807 737 aa34.08■■■■□ 3.05
U2AF1-201ENST00000291552 C10orf71Q711Q0 1435 aa34.06■■■■□ 3.04
U2AF1-201ENST00000291552 SLC39A6Q13433 755 aa34.06■■■■□ 3.04
U2AF1-201ENST00000291552 PXDNLA1KZ92 1463 aa34.06■■■■□ 3.04
U2AF1-201ENST00000291552 WWC3Q9ULE0 1092 aa34.05■■■■□ 3.04
U2AF1-201ENST00000291552 BRCA1P38398 1863 aaKnown RBP34.04■■■■□ 3.04
U2AF1-201ENST00000291552 U2SURPO15042 1029 aaKnown RBP34.04■■■■□ 3.04
U2AF1-201ENST00000291552 RFC4P35249 363 aa34.04■■■■□ 3.04
U2AF1-201ENST00000291552 INTS5Q6P9B9 1019 aaKnown RBP34.04■■■■□ 3.04
U2AF1-201ENST00000291552 DNAJC10Q8IXB1 793 aa34.04■■■■□ 3.04
U2AF1-201ENST00000291552 NLGN1Q8N2Q7 840 aa34.04■■■■□ 3.04
U2AF1-201ENST00000291552 SRP68Q9UHB9 627 aaKnown RBP34.02■■■■□ 3.04
U2AF1-201ENST00000291552 USP42Q9H9J4 1324 aaKnown RBP34.01■■■■□ 3.03
U2AF1-201ENST00000291552 CCDC87Q9NVE4 849 aa33.97■■■■□ 3.03
U2AF1-201ENST00000291552 CYP19A1P11511 503 aaPredicted RBP33.96■■■■□ 3.03
U2AF1-201ENST00000291552 SOS1Q07889 1333 aaPredicted RBP33.96■■■■□ 3.03
U2AF1-201ENST00000291552 ADCY9O60503 1353 aa33.96■■■■□ 3.03
U2AF1-201ENST00000291552 FKBP8Q14318 412 aa33.95■■■■□ 3.03
U2AF1-201ENST00000291552 PPP2R1AP30153 589 aa33.94■■■■□ 3.02
U2AF1-201ENST00000291552 IL17REQ8NFR9 667 aa33.94■■■■□ 3.02
U2AF1-201ENST00000291552 GAS2L2Q8NHY3 880 aa33.94■■■■□ 3.02
U2AF1-201ENST00000291552 DDR1Q08345 913 aa33.93■■■■□ 3.02
U2AF1-201ENST00000291552 RSPH6AQ9H0K4 717 aa33.93■■■■□ 3.02
U2AF1-201ENST00000291552 ATP10DQ9P241 1426 aa33.93■■■■□ 3.02
U2AF1-201ENST00000291552 PHACTR3Q96KR7 559 aa33.92■■■■□ 3.02
U2AF1-201ENST00000291552 PARP3Q9Y6F1 533 aa33.92■■■■□ 3.02
U2AF1-201ENST00000291552 AFDNP55196 1824 aaKnown RBP33.92■■■■□ 3.02
U2AF1-201ENST00000291552 GNAT3A8MTJ3 354 aa33.91■■■■□ 3.02
U2AF1-201ENST00000291552 ZBTB1Q9Y2K1 713 aa33.91■■■■□ 3.02
U2AF1-201ENST00000291552 PRKAR2BP31323 418 aa33.9■■■■□ 3.02
U2AF1-201ENST00000291552 TGFB2P61812 414 aa33.9■■■■□ 3.02
U2AF1-201ENST00000291552 CFAP53Q96M91 514 aa33.9■■■■□ 3.02
U2AF1-201ENST00000291552 COL15A1P39059 1388 aa33.89■■■■□ 3.02
U2AF1-201ENST00000291552 CEMIPQ8WUJ3 1361 aa33.89■■■■□ 3.02
U2AF1-201ENST00000291552 ARFGEF1Q9Y6D6 1849 aa33.89■■■■□ 3.02
U2AF1-201ENST00000291552 A0A0G2JLW4 131 aa33.89■■■■□ 3.02
U2AF1-201ENST00000291552 VSIG10Q8N0Z9 540 aa33.89■■■■□ 3.02
U2AF1-201ENST00000291552 DPEP1P16444 411 aa33.87■■■■□ 3.01
U2AF1-201ENST00000291552 C1QTNF8P60827 252 aa33.87■■■■□ 3.01
U2AF1-201ENST00000291552 NRXN2Q9P2S2 1712 aa33.87■■■■□ 3.01
Retrieved 100 of 20,778 RNA–protein pairs in 58.6 ms