RNA–Protein interactions for RNA: ENST00000291527.2

TFF1-201, Transcript of trefoil factor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TFF1, Length 551 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TFF1-201ENST00000291527 C1QTNF8P60827 252 aa12.16□□□□□ -0.46
TFF1-201ENST00000291527 EIF4G2P78344 907 aaKnown RBP eCLIP12.16□□□□□ -0.46
TFF1-201ENST00000291527 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP12.16□□□□□ -0.46
TFF1-201ENST00000291527 KDRP35968 1356 aa12.16□□□□□ -0.46
TFF1-201ENST00000291527 GNPATO15228 680 aa12.15□□□□□ -0.46
TFF1-201ENST00000291527 CLSPNQ9HAW4 1339 aa12.14□□□□□ -0.47
TFF1-201ENST00000291527 RBM42Q9BTD8 480 aaKnown RBP12.14□□□□□ -0.47
TFF1-201ENST00000291527 CD2APQ9Y5K6 639 aa12.14□□□□□ -0.47
TFF1-201ENST00000291527 C4AP0C0L4 1744 aa12.14□□□□□ -0.47
TFF1-201ENST00000291527 KIF13BQ9NQT8 1826 aa12.14□□□□□ -0.47
TFF1-201ENST00000291527 SCN11AQ9UI33 1791 aa12.13□□□□□ -0.47
TFF1-201ENST00000291527 IL13P35225 146 aa12.13□□□□□ -0.47
TFF1-201ENST00000291527 ZNF530Q6P9A1 599 aaPredicted RBP12.13□□□□□ -0.47
TFF1-201ENST00000291527 MORC1Q86VD1 984 aa12.13□□□□□ -0.47
TFF1-201ENST00000291527 CCER1Q8TC90 406 aaPredicted RBP12.13□□□□□ -0.47
TFF1-201ENST00000291527 TJP1Q07157 1748 aa12.13□□□□□ -0.47
TFF1-201ENST00000291527 SENP3-EIF4A1A0A087X0R7 540 aa12.12□□□□□ -0.47
TFF1-201ENST00000291527 SSFA2P28290 1259 aa12.12□□□□□ -0.47
TFF1-201ENST00000291527 AMER1Q5JTC6 1135 aaPredicted RBP12.12□□□□□ -0.47
TFF1-201ENST00000291527 SULT6B1Q6IMI4 303 aa12.12□□□□□ -0.47
TFF1-201ENST00000291527 FLAD1Q8NFF5 587 aa12.12□□□□□ -0.47
TFF1-201ENST00000291527 ARHGEF1Q92888 912 aaKnown RBP12.12□□□□□ -0.47
TFF1-201ENST00000291527 ATP10DQ9P241 1426 aa12.11□□□□□ -0.47
TFF1-201ENST00000291527 ZNF831Q5JPB2 1677 aa12.11□□□□□ -0.47
TFF1-201ENST00000291527 ADAMTS7Q9UKP4 1686 aa12.11□□□□□ -0.47
TFF1-201ENST00000291527 PTCD1O75127 700 aaKnown RBP12.11□□□□□ -0.47
TFF1-201ENST00000291527 MMP10P09238 476 aa12.11□□□□□ -0.47
TFF1-201ENST00000291527 NFATC2IPQ8NCF5 419 aa12.11□□□□□ -0.47
TFF1-201ENST00000291527 ZNF526Q8TF50 670 aaPredicted RBP12.11□□□□□ -0.47
TFF1-201ENST00000291527 LGR6Q9HBX8 967 aa12.11□□□□□ -0.47
TFF1-201ENST00000291527 SRP68Q9UHB9 627 aaKnown RBP12.11□□□□□ -0.47
TFF1-201ENST00000291527 CICQ96RK0 1608 aaPredicted RBP12.11□□□□□ -0.47
TFF1-201ENST00000291527 KIF7Q2M1P5 1343 aa12.11□□□□□ -0.47
TFF1-201ENST00000291527 BRCA1P38398 1863 aaKnown RBP12.1□□□□□ -0.47
TFF1-201ENST00000291527 A0A0G2JLW4 131 aa12.1□□□□□ -0.47
TFF1-201ENST00000291527 ERVV-2B6SEH9 535 aa12.1□□□□□ -0.47
TFF1-201ENST00000291527 GRIN3BO60391 1043 aa12.1□□□□□ -0.47
TFF1-201ENST00000291527 PLEKHO1Q53GL0 409 aaPredicted RBP12.1□□□□□ -0.47
TFF1-201ENST00000291527 PXDNLA1KZ92 1463 aa12.09□□□□□ -0.47
TFF1-201ENST00000291527 ADCY9O60503 1353 aa12.09□□□□□ -0.47
TFF1-201ENST00000291527 GYS1P13807 737 aa12.09□□□□□ -0.47
TFF1-201ENST00000291527 CABP4P57796 275 aa12.09□□□□□ -0.47
TFF1-201ENST00000291527 CNGB1Q14028 1251 aaPredicted RBP12.09□□□□□ -0.47
TFF1-201ENST00000291527 DCAF5Q96JK2 942 aa12.09□□□□□ -0.47
TFF1-201ENST00000291527 PER1O15534 1290 aaPredicted RBP12.08□□□□□ -0.48
TFF1-201ENST00000291527 GIGYF1O75420 1035 aaPredicted RBP12.08□□□□□ -0.48
TFF1-201ENST00000291527 HMOX1P09601 288 aa12.08□□□□□ -0.48
TFF1-201ENST00000291527 MTHFSP49914 203 aa12.08□□□□□ -0.48
TFF1-201ENST00000291527 SLC39A6Q13433 755 aa12.08□□□□□ -0.48
TFF1-201ENST00000291527 RPS6KA4O75676 772 aa12.07□□□□□ -0.48
TFF1-201ENST00000291527 KCNA3P22001 575 aa12.07□□□□□ -0.48
TFF1-201ENST00000291527 CRKLP46109 303 aaKnown RBP12.07□□□□□ -0.48
TFF1-201ENST00000291527 TRAPPC3LQ5T215 181 aa12.07□□□□□ -0.48
TFF1-201ENST00000291527 INTS5Q6P9B9 1019 aaKnown RBP12.07□□□□□ -0.48
TFF1-201ENST00000291527 RTCBQ9Y3I0 505 aaKnown RBP12.07□□□□□ -0.48
TFF1-201ENST00000291527 DPEP1P16444 411 aa12.06□□□□□ -0.48
TFF1-201ENST00000291527 DDR1Q08345 913 aa12.06□□□□□ -0.48
TFF1-201ENST00000291527 FKBP8Q14318 412 aa12.06□□□□□ -0.48
TFF1-201ENST00000291527 CC2D1BQ5T0F9 858 aaKnown RBP12.06□□□□□ -0.48
TFF1-201ENST00000291527 RC3H1Q5TC82 1133 aaKnown RBP12.06□□□□□ -0.48
TFF1-201ENST00000291527 KNSTRNQ9Y448 316 aa12.06□□□□□ -0.48
TFF1-201ENST00000291527 CNTNAP4Q9C0A0 1308 aa12.06□□□□□ -0.48
TFF1-201ENST00000291527 AFDNP55196 1824 aaKnown RBP12.05□□□□□ -0.48
TFF1-201ENST00000291527 AMOTQ4VCS5 1084 aa12.05□□□□□ -0.48
TFF1-201ENST00000291527 DNAJC10Q8IXB1 793 aa12.05□□□□□ -0.48
TFF1-201ENST00000291527 C10orf71Q711Q0 1435 aa12.04□□□□□ -0.48
TFF1-201ENST00000291527 RNMTO43148 476 aaKnown RBP12.04□□□□□ -0.48
TFF1-201ENST00000291527 HSP90AB1P08238 724 aaKnown RBP12.04□□□□□ -0.48
TFF1-201ENST00000291527 MTHFSDQ2M296 383 aaKnown RBP12.04□□□□□ -0.48
TFF1-201ENST00000291527 KCPQ6ZWJ8 1503 aa12.04□□□□□ -0.48
TFF1-201ENST00000291527 RFC4P35249 363 aa12.03□□□□□ -0.48
TFF1-201ENST00000291527 C1orf141Q5JVX7 400 aa12.03□□□□□ -0.48
TFF1-201ENST00000291527 BCS1LQ9Y276 419 aa12.03□□□□□ -0.48
TFF1-201ENST00000291527 SBF1O95248 1867 aa12.03□□□□□ -0.48
TFF1-201ENST00000291527 COL3A1P02461 1466 aaPredicted RBP12.02□□□□□ -0.48
TFF1-201ENST00000291527 KIF3CO14782 793 aa12.02□□□□□ -0.49
TFF1-201ENST00000291527 CHRNA5P30532 468 aa12.02□□□□□ -0.49
TFF1-201ENST00000291527 AKAP4Q5JQC9 854 aa12.02□□□□□ -0.49
TFF1-201ENST00000291527 NLGN1Q8N2Q7 840 aa12.02□□□□□ -0.49
TFF1-201ENST00000291527 SLC52A2Q9HAB3 445 aa12.02□□□□□ -0.49
TFF1-201ENST00000291527 PLEKHG2Q9H7P9 1386 aa12.02□□□□□ -0.49
TFF1-201ENST00000291527 ARFGEF1Q9Y6D6 1849 aa12.02□□□□□ -0.49
TFF1-201ENST00000291527 UBR2Q8IWV8 1755 aa12.01□□□□□ -0.49
TFF1-201ENST00000291527 CYP19A1P11511 503 aaPredicted RBP12.01□□□□□ -0.49
TFF1-201ENST00000291527 TM4SF1P30408 202 aa12.01□□□□□ -0.49
TFF1-201ENST00000291527 BCL2L12Q9HB09 334 aa12.01□□□□□ -0.49
TFF1-201ENST00000291527 GPBP1L1Q9HC44 474 aaPredicted RBP12.01□□□□□ -0.49
TFF1-201ENST00000291527 USP42Q9H9J4 1324 aaKnown RBP12.01□□□□□ -0.49
TFF1-201ENST00000291527 MRC1P22897 1456 aa12.01□□□□□ -0.49
TFF1-201ENST00000291527 PCNTO95613 3336 aa12.01□□□□□ -0.49
TFF1-201ENST00000291527 SIPA1L3O60292 1781 aaPredicted RBP12□□□□□ -0.49
TFF1-201ENST00000291527 CCDC88AQ3V6T2 1871 aa12□□□□□ -0.49
TFF1-201ENST00000291527 POLRMTO00411 1230 aaKnown RBP12□□□□□ -0.49
TFF1-201ENST00000291527 ADRA2BP18089 450 aa12□□□□□ -0.49
TFF1-201ENST00000291527 TGFB2P61812 414 aa12□□□□□ -0.49
TFF1-201ENST00000291527 USPL1Q5W0Q7 1092 aa12□□□□□ -0.49
TFF1-201ENST00000291527 ARHGAP27Q6ZUM4 889 aa12□□□□□ -0.49
TFF1-201ENST00000291527 PARP3Q9Y6F1 533 aa12□□□□□ -0.49
TFF1-201ENST00000291527 FCHSD2O94868 740 aa11.99□□□□□ -0.49
TFF1-201ENST00000291527 PRELPP51888 382 aa11.99□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 11.7 ms