RNA–Protein interactions for RNA: ENST00000291300.8

HIF3A-203, Transcript of hypoxia inducible factor 3 subunit alpha, humanhuman

TSL 5

Gene HIF3A, Length 2,101 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HIF3A-203ENST00000291300 ABCC6O95255 1503 aa21.11■□□□□ 0.97
HIF3A-203ENST00000291300 CCDC30Q5VVM6 783 aa21.11■□□□□ 0.97
HIF3A-203ENST00000291300 ADAMTS7Q9UKP4 1686 aa21.11■□□□□ 0.97
HIF3A-203ENST00000291300 KDM6AO15550 1401 aaPredicted RBP21.11■□□□□ 0.97
HIF3A-203ENST00000291300 STK31Q9BXU1 1019 aa21.11■□□□□ 0.97
HIF3A-203ENST00000291300 TATP17735 454 aaPredicted RBP21.1■□□□□ 0.97
HIF3A-203ENST00000291300 EIF2S2P20042 333 aaKnown RBP21.1■□□□□ 0.97
HIF3A-203ENST00000291300 FLIIQ13045 1269 aa21.1■□□□□ 0.97
HIF3A-203ENST00000291300 SLC4A10Q6U841 1118 aa21.1■□□□□ 0.97
HIF3A-203ENST00000291300 MEIS3Q99687 375 aa21.1■□□□□ 0.97
HIF3A-203ENST00000291300 HDGFL1Q5TGJ6 251 aa21.1■□□□□ 0.97
HIF3A-203ENST00000291300 PHAXQ9H814 394 aaKnown RBP21.1■□□□□ 0.97
HIF3A-203ENST00000291300 PRAMEF22A3QJZ6 481 aa21.09■□□□□ 0.97
HIF3A-203ENST00000291300 PHKG2P15735 406 aa21.08■□□□□ 0.97
HIF3A-203ENST00000291300 CYP27B1O15528 508 aa21.07■□□□□ 0.96
HIF3A-203ENST00000291300 OVOS2A0A0G2JMS6 1433 aa21.07■□□□□ 0.96
HIF3A-203ENST00000291300 SCN11AQ9UI33 1791 aa21.07■□□□□ 0.96
HIF3A-203ENST00000291300 COL5A2P05997 1499 aaPredicted RBP21.07■□□□□ 0.96
HIF3A-203ENST00000291300 ANXA1P04083 346 aa21.07■□□□□ 0.96
HIF3A-203ENST00000291300 FKBP5Q13451 457 aaPredicted RBP21.07■□□□□ 0.96
HIF3A-203ENST00000291300 ATP10DQ9P241 1426 aa21.07■□□□□ 0.96
HIF3A-203ENST00000291300 CACNA1FO60840 1977 aa21.06■□□□□ 0.96
HIF3A-203ENST00000291300 CHPF2Q9P2E5 772 aa21.05■□□□□ 0.96
HIF3A-203ENST00000291300 SOS1Q07889 1333 aaPredicted RBP21.05■□□□□ 0.96
HIF3A-203ENST00000291300 WDR17Q8IZU2 1322 aa21.05■□□□□ 0.96
HIF3A-203ENST00000291300 NUCB1Q02818 461 aa21.05■□□□□ 0.96
HIF3A-203ENST00000291300 SLC39A6Q13433 755 aa21.05■□□□□ 0.96
HIF3A-203ENST00000291300 LNPKQ9C0E8 428 aa21.05■□□□□ 0.96
HIF3A-203ENST00000291300 CHMP4BQ9H444 224 aaKnown RBP21.05■□□□□ 0.96
HIF3A-203ENST00000291300 SPG7Q9UQ90 795 aa21.05■□□□□ 0.96
HIF3A-203ENST00000291300 PKD1L3Q7Z443 1732 aa21.05■□□□□ 0.96
HIF3A-203ENST00000291300 ROBO1Q9Y6N7 1651 aa21.04■□□□□ 0.96
HIF3A-203ENST00000291300 SEC24BO95487 1268 aa21.04■□□□□ 0.96
HIF3A-203ENST00000291300 TOM1L2Q6ZVM7 507 aa21.04■□□□□ 0.96
HIF3A-203ENST00000291300 HEG1Q9ULI3 1381 aa21.03■□□□□ 0.96
HIF3A-203ENST00000291300 NFATC2IPQ8NCF5 419 aa21.03■□□□□ 0.96
HIF3A-203ENST00000291300 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP21.03■□□□□ 0.96
HIF3A-203ENST00000291300 LTBP4Q8N2S1 1624 aa21.02■□□□□ 0.96
HIF3A-203ENST00000291300 GIGYF1O75420 1035 aaPredicted RBP21.02■□□□□ 0.96
HIF3A-203ENST00000291300 ANP32AP39687 249 aaKnown RBP21.02■□□□□ 0.96
HIF3A-203ENST00000291300 STRN4Q9NRL3 753 aa21.02■□□□□ 0.96
HIF3A-203ENST00000291300 LARP1Q6PKG0 1096 aaKnown RBP21.02■□□□□ 0.96
HIF3A-203ENST00000291300 IFNL2Q8IZJ0 200 aa21.02■□□□□ 0.96
HIF3A-203ENST00000291300 SLC52A2Q9HAB3 445 aa21.02■□□□□ 0.96
HIF3A-203ENST00000291300 PROSER3Q2NL68 480 aa21.01■□□□□ 0.95
HIF3A-203ENST00000291300 CEP85Q6P2H3 762 aa21.01■□□□□ 0.95
HIF3A-203ENST00000291300 CCT4P50991 539 aaKnown RBP21.01■□□□□ 0.95
HIF3A-203ENST00000291300 ANKRD45Q5TZF3 282 aa21.01■□□□□ 0.95
HIF3A-203ENST00000291300 CHD1LQ86WJ1 897 aa21.01■□□□□ 0.95
HIF3A-203ENST00000291300 HOXB7P09629 217 aa21■□□□□ 0.95
HIF3A-203ENST00000291300 ANKRD44Q8N8A2 993 aa21■□□□□ 0.95
HIF3A-203ENST00000291300 GCC1Q96CN9 775 aa20.98■□□□□ 0.95
HIF3A-203ENST00000291300 IPO9Q96P70 1041 aaKnown RBP20.98■□□□□ 0.95
HIF3A-203ENST00000291300 C5P01031 1676 aa20.98■□□□□ 0.95
HIF3A-203ENST00000291300 ZNF790Q6PG37 636 aa20.98■□□□□ 0.95
HIF3A-203ENST00000291300 N4BP2Q86UW6 1770 aaPredicted RBP20.97■□□□□ 0.95
HIF3A-203ENST00000291300 PARP4Q9UKK3 1724 aaKnown RBP20.96■□□□□ 0.95
HIF3A-203ENST00000291300 DCAF5Q96JK2 942 aa20.96■□□□□ 0.95
HIF3A-203ENST00000291300 DCTPP1Q9H773 170 aa20.96■□□□□ 0.95
HIF3A-203ENST00000291300 MRC1P22897 1456 aa20.95■□□□□ 0.94
HIF3A-203ENST00000291300 CARD10Q9BWT7 1032 aa20.95■□□□□ 0.94
HIF3A-203ENST00000291300 USP35Q9P2H5 1018 aa20.95■□□□□ 0.94
HIF3A-203ENST00000291300 SHANK3Q9BYB0 1731 aa20.95■□□□□ 0.94
HIF3A-203ENST00000291300 EVA1CP58658 441 aa20.95■□□□□ 0.94
HIF3A-203ENST00000291300 RPAP2Q8IXW5 612 aaPredicted RBP20.95■□□□□ 0.94
HIF3A-203ENST00000291300 BCL11AQ9H165 835 aa20.95■□□□□ 0.94
HIF3A-203ENST00000291300 ADCY9O60503 1353 aa20.94■□□□□ 0.94
HIF3A-203ENST00000291300 PI4KAP2A4QPH2 592 aa20.94■□□□□ 0.94
HIF3A-203ENST00000291300 PI4KAP1Q8N8J0 262 aa20.94■□□□□ 0.94
HIF3A-203ENST00000291300 ZCRB1Q8TBF4 217 aaKnown RBP20.94■□□□□ 0.94
HIF3A-203ENST00000291300 ZNF496Q96IT1 587 aaPredicted RBP20.94■□□□□ 0.94
HIF3A-203ENST00000291300 USP44Q9H0E7 712 aa20.94■□□□□ 0.94
HIF3A-203ENST00000291300 BTG4Q9NY30 223 aa20.93■□□□□ 0.94
HIF3A-203ENST00000291300 PDIA6Q15084 440 aa20.93■□□□□ 0.94
HIF3A-203ENST00000291300 DBF4Q9UBU7 674 aaPredicted RBP20.93■□□□□ 0.94
HIF3A-203ENST00000291300 PXDNLA1KZ92 1463 aa20.93■□□□□ 0.94
HIF3A-203ENST00000291300 AHDC1Q5TGY3 1603 aaPredicted RBP20.93■□□□□ 0.94
HIF3A-203ENST00000291300 PLEKHG2Q9H7P9 1386 aa20.92■□□□□ 0.94
HIF3A-203ENST00000291300 IL2RBP14784 551 aa20.92■□□□□ 0.94
HIF3A-203ENST00000291300 C16orf71Q8IYS4 520 aaPredicted RBP20.92■□□□□ 0.94
HIF3A-203ENST00000291300 APBB1O00213 710 aa20.91■□□□□ 0.94
HIF3A-203ENST00000291300 GNAI2P04899 355 aa20.91■□□□□ 0.94
HIF3A-203ENST00000291300 DDX54Q8TDD1 881 aaKnown RBP20.91■□□□□ 0.94
HIF3A-203ENST00000291300 COL16A1Q07092 1604 aaPredicted RBP20.91■□□□□ 0.94
HIF3A-203ENST00000291300 SMARCA5O60264 1052 aaPredicted RBP20.9■□□□□ 0.94
HIF3A-203ENST00000291300 CABP4P57796 275 aa20.9■□□□□ 0.94
HIF3A-203ENST00000291300 BEND3Q5T5X7 828 aa20.9■□□□□ 0.94
HIF3A-203ENST00000291300 LRRFIP2Q9Y608 721 aaKnown RBP20.9■□□□□ 0.94
HIF3A-203ENST00000291300 PCDH11XQ9BZA7 1347 aa20.9■□□□□ 0.94
HIF3A-203ENST00000291300 PCDH11YQ9BZA8 1340 aa20.9■□□□□ 0.94
HIF3A-203ENST00000291300 PNMA6EA0A0J9YXQ4 647 aa20.9■□□□□ 0.94
HIF3A-203ENST00000291300 PIP4K2AP48426 406 aaPredicted RBP20.9■□□□□ 0.94
HIF3A-203ENST00000291300 DNAAF4Q8WXU2 420 aa20.9■□□□□ 0.94
HIF3A-203ENST00000291300 GLI3P10071 1580 aa20.9■□□□□ 0.94
HIF3A-203ENST00000291300 OTUD7AQ8TE49 926 aaPredicted RBP20.89■□□□□ 0.94
HIF3A-203ENST00000291300 USP16Q9Y5T5 823 aa20.89■□□□□ 0.94
HIF3A-203ENST00000291300 HSP90AB1P08238 724 aaKnown RBP20.88■□□□□ 0.93
HIF3A-203ENST00000291300 SRCIN1Q9C0H9 1055 aa20.88■□□□□ 0.93
HIF3A-203ENST00000291300 NOP58Q9Y2X3 529 aaKnown RBP20.88■□□□□ 0.93
HIF3A-203ENST00000291300 NBPF7P0C2Y1 421 aaPredicted RBP20.87■□□□□ 0.93
Retrieved 100 of 20,778 RNA–protein pairs in 18 ms