RNA–Protein interactions for RNA: ENST00000290378.4

ACTC1-201, Transcript of actin, alpha, cardiac muscle 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ACTC1, Length 4,106 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTC1-201ENST00000290378 FERMT3Q86UX7 667 aa13.19□□□□□ -0.3
ACTC1-201ENST00000290378 ZFP91Q96JP5 570 aaPredicted RBP13.19□□□□□ -0.3
ACTC1-201ENST00000290378 TET3O43151 1660 aa13.19□□□□□ -0.3
ACTC1-201ENST00000290378 TOM1L2Q6ZVM7 507 aa13.19□□□□□ -0.3
ACTC1-201ENST00000290378 KAT6BQ8WYB5 2073 aa13.19□□□□□ -0.3
ACTC1-201ENST00000290378 PLEKHO1Q53GL0 409 aaPredicted RBP13.18□□□□□ -0.3
ACTC1-201ENST00000290378 GIMAP6Q6P9H5 292 aa13.18□□□□□ -0.3
ACTC1-201ENST00000290378 GNAT3A8MTJ3 354 aa13.18□□□□□ -0.3
ACTC1-201ENST00000290378 NUCB1Q02818 461 aa13.18□□□□□ -0.3
ACTC1-201ENST00000290378 CEP152O94986 1710 aa13.18□□□□□ -0.3
ACTC1-201ENST00000290378 BMP2KLQ5H9B9 411 aa13.18□□□□□ -0.3
ACTC1-201ENST00000290378 OTUD7AQ8TE49 926 aaPredicted RBP13.18□□□□□ -0.3
ACTC1-201ENST00000290378 GCC1Q96CN9 775 aa13.18□□□□□ -0.3
ACTC1-201ENST00000290378 TBX22Q9Y458 520 aa13.18□□□□□ -0.3
ACTC1-201ENST00000290378 TRPM1Q7Z4N2 1603 aa13.17□□□□□ -0.3
ACTC1-201ENST00000290378 CEBPZQ03701 1054 aaKnown RBP13.17□□□□□ -0.3
ACTC1-201ENST00000290378 SNX21Q969T3 373 aa13.17□□□□□ -0.3
ACTC1-201ENST00000290378 TRIM35Q9UPQ4 493 aa13.17□□□□□ -0.3
ACTC1-201ENST00000290378 SMC3Q9UQE7 1217 aa13.17□□□□□ -0.3
ACTC1-201ENST00000290378 EXOC6BQ9Y2D4 811 aa13.17□□□□□ -0.3
ACTC1-201ENST00000290378 NUTM2BA6NNL0 878 aaPredicted RBP13.17□□□□□ -0.3
ACTC1-201ENST00000290378 NUTM2EB1AL46 878 aaPredicted RBP13.17□□□□□ -0.3
ACTC1-201ENST00000290378 NUTM2AQ8IVF1 878 aaPredicted RBP13.17□□□□□ -0.3
ACTC1-201ENST00000290378 NINLQ9Y2I6 1382 aa13.17□□□□□ -0.3
ACTC1-201ENST00000290378 RNF17Q9BXT8 1623 aaKnown RBP13.17□□□□□ -0.3
ACTC1-201ENST00000290378 KIF1BO60333 1816 aa13.17□□□□□ -0.3
ACTC1-201ENST00000290378 LETM1O95202 739 aaPredicted RBP13.17□□□□□ -0.3
ACTC1-201ENST00000290378 EYA1Q99502 592 aa13.17□□□□□ -0.3
ACTC1-201ENST00000290378 NSFL1CQ9UNZ2 370 aaKnown RBP13.17□□□□□ -0.3
ACTC1-201ENST00000290378 GTF2E1P29083 439 aaPredicted RBP13.16□□□□□ -0.3
ACTC1-201ENST00000290378 MTHFSDQ2M296 383 aaKnown RBP13.16□□□□□ -0.3
ACTC1-201ENST00000290378 CCDC30Q5VVM6 783 aa13.16□□□□□ -0.3
ACTC1-201ENST00000290378 LMBRD1Q9NUN5 540 aa13.16□□□□□ -0.3
ACTC1-201ENST00000290378 PRR36Q9H6K5 1346 aa13.16□□□□□ -0.3
ACTC1-201ENST00000290378 ARAP3Q8WWN8 1544 aa13.16□□□□□ -0.3
ACTC1-201ENST00000290378 ROBO2Q9HCK4 1378 aa13.16□□□□□ -0.3
ACTC1-201ENST00000290378 CWC22Q9HCG8 908 aaKnown RBP13.16□□□□□ -0.3
ACTC1-201ENST00000290378 PIP4K2BP78356 416 aa13.16□□□□□ -0.3
ACTC1-201ENST00000290378 CFAP44Q96MT7 982 aa13.16□□□□□ -0.3
ACTC1-201ENST00000290378 PPP1R9BQ96SB3 815 aa13.16□□□□□ -0.3
ACTC1-201ENST00000290378 CCDC66A2RUB6 948 aa13.15□□□□□ -0.3
ACTC1-201ENST00000290378 UBTFL1P0CB47 393 aaPredicted RBP13.15□□□□□ -0.3
ACTC1-201ENST00000290378 RIC3Q7Z5B4 369 aa13.15□□□□□ -0.3
ACTC1-201ENST00000290378 BICD2Q8TD16 824 aa13.15□□□□□ -0.3
ACTC1-201ENST00000290378 ZMYM4Q5VZL5 1548 aa13.15□□□□□ -0.3
ACTC1-201ENST00000290378 BTBD11A6QL63 1104 aa13.15□□□□□ -0.3
ACTC1-201ENST00000290378 GNL2Q13823 731 aaKnown RBP13.15□□□□□ -0.3
ACTC1-201ENST00000290378 FILIP1Q7Z7B0 1213 aa13.15□□□□□ -0.3
ACTC1-201ENST00000290378 CKAP2LQ8IYA6 745 aa13.15□□□□□ -0.3
ACTC1-201ENST00000290378 BECN2A8MW95 431 aa13.15□□□□□ -0.3
ACTC1-201ENST00000290378 GOLGA6L19H0YKK7 550 aa13.15□□□□□ -0.3
ACTC1-201ENST00000290378 GTPBP4Q9BZE4 634 aaKnown RBP13.15□□□□□ -0.3
ACTC1-201ENST00000290378 TRMT1Q9NXH9 659 aaKnown RBP13.15□□□□□ -0.3
ACTC1-201ENST00000290378 PTCD1O75127 700 aaKnown RBP13.15□□□□□ -0.31
ACTC1-201ENST00000290378 FMNL2Q96PY5 1086 aa13.15□□□□□ -0.31
ACTC1-201ENST00000290378 SPHKAPQ2M3C7 1700 aa13.15□□□□□ -0.31
ACTC1-201ENST00000290378 CFAP74Q9C0B2 1584 aa13.14□□□□□ -0.31
ACTC1-201ENST00000290378 MYOM2P54296 1465 aa13.14□□□□□ -0.31
ACTC1-201ENST00000290378 ERC2O15083 957 aa13.14□□□□□ -0.31
ACTC1-201ENST00000290378 SURF6O75683 361 aaKnown RBP13.14□□□□□ -0.31
ACTC1-201ENST00000290378 HDAC1Q13547 482 aaPredicted RBP13.14□□□□□ -0.31
ACTC1-201ENST00000290378 CCDC112Q8NEF3 446 aa13.14□□□□□ -0.31
ACTC1-201ENST00000290378 ABCC11Q96J66 1382 aa13.14□□□□□ -0.31
ACTC1-201ENST00000290378 IL13P35225 146 aa13.14□□□□□ -0.31
ACTC1-201ENST00000290378 PIP4K2AP48426 406 aaPredicted RBP13.14□□□□□ -0.31
ACTC1-201ENST00000290378 GPT2Q8TD30 523 aa13.14□□□□□ -0.31
ACTC1-201ENST00000290378 IL1RAPL2Q9NP60 686 aa13.14□□□□□ -0.31
ACTC1-201ENST00000290378 BLMP54132 1417 aaPredicted RBP13.14□□□□□ -0.31
ACTC1-201ENST00000290378 ZNF521Q96K83 1311 aa13.14□□□□□ -0.31
ACTC1-201ENST00000290378 KIDINS220Q9ULH0 1771 aa13.14□□□□□ -0.31
ACTC1-201ENST00000290378 HSP90B1P14625 803 aaKnown RBP13.14□□□□□ -0.31
ACTC1-201ENST00000290378 TATP17735 454 aaPredicted RBP13.14□□□□□ -0.31
ACTC1-201ENST00000290378 RBM25P49756 843 aaKnown RBP13.14□□□□□ -0.31
ACTC1-201ENST00000290378 ATP2B3Q16720 1220 aa13.14□□□□□ -0.31
ACTC1-201ENST00000290378 PUS7Q96PZ0 661 aaKnown RBP13.14□□□□□ -0.31
ACTC1-201ENST00000290378 GADD45BO75293 160 aaPredicted RBP13.13□□□□□ -0.31
ACTC1-201ENST00000290378 NPC1L1Q9UHC9 1359 aa13.13□□□□□ -0.31
ACTC1-201ENST00000290378 TMX3Q96JJ7 454 aa13.13□□□□□ -0.31
ACTC1-201ENST00000290378 TRIM34Q9BYJ4 488 aa13.13□□□□□ -0.31
ACTC1-201ENST00000290378 PPRC1Q5VV67 1664 aaKnown RBP13.13□□□□□ -0.31
ACTC1-201ENST00000290378 HOMER1Q86YM7 354 aa13.13□□□□□ -0.31
ACTC1-201ENST00000290378 ZBTB40Q9NUA8 1239 aa13.13□□□□□ -0.31
ACTC1-201ENST00000290378 SBNO2Q9Y2G9 1366 aa13.13□□□□□ -0.31
ACTC1-201ENST00000290378 KIF20AO95235 890 aa13.12□□□□□ -0.31
ACTC1-201ENST00000290378 SDSP20132 328 aa13.12□□□□□ -0.31
ACTC1-201ENST00000290378 NEXNQ0ZGT2 675 aa13.12□□□□□ -0.31
ACTC1-201ENST00000290378 USP48Q86UV5 1035 aa13.12□□□□□ -0.31
ACTC1-201ENST00000290378 KCNH5Q8NCM2 988 aa13.12□□□□□ -0.31
ACTC1-201ENST00000290378 KDM5AP29375 1690 aaKnown RBP13.12□□□□□ -0.31
ACTC1-201ENST00000290378 APPP05067 770 aa13.12□□□□□ -0.31
ACTC1-201ENST00000290378 TAF7LQ5H9L4 462 aa13.12□□□□□ -0.31
ACTC1-201ENST00000290378 SIL1Q9H173 461 aa13.12□□□□□ -0.31
ACTC1-201ENST00000290378 TMX1Q9H3N1 280 aa13.12□□□□□ -0.31
ACTC1-201ENST00000290378 RIMBP3CA6NJZ7 1639 aa13.12□□□□□ -0.31
ACTC1-201ENST00000290378 RIMBP3BA6NNM3 1639 aa13.12□□□□□ -0.31
ACTC1-201ENST00000290378 RIMBP3Q9UFD9 1639 aa13.12□□□□□ -0.31
ACTC1-201ENST00000290378 MAP3K4Q9Y6R4 1608 aa13.12□□□□□ -0.31
ACTC1-201ENST00000290378 FAM177A1Q8N128 213 aaPredicted RBP13.11□□□□□ -0.31
ACTC1-201ENST00000290378 ANKRD24Q8TF21 1146 aa13.11□□□□□ -0.31
ACTC1-201ENST00000290378 BCL2L12Q9HB09 334 aa13.11□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 53 ms