RNA–Protein interactions for RNA: ENST00000287600.8

PDE6D-201, Transcript of phosphodiesterase 6D, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PDE6D, Length 1,175 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDE6D-201ENST00000287600 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP20.76■□□□□ 0.91
PDE6D-201ENST00000287600 YBX3P16989 372 aaKnown RBP eCLIP20.76■□□□□ 0.91
PDE6D-201ENST00000287600 IGSF1Q8N6C5 1336 aa20.76■□□□□ 0.91
PDE6D-201ENST00000287600 GRIN3BO60391 1043 aa20.75■□□□□ 0.91
PDE6D-201ENST00000287600 AMIGO3Q86WK7 504 aa20.75■□□□□ 0.91
PDE6D-201ENST00000287600 LINC00116Q8NCU8 138 aa20.75■□□□□ 0.91
PDE6D-201ENST00000287600 ASAP1Q9ULH1 1129 aa20.75■□□□□ 0.91
PDE6D-201ENST00000287600 SLC4A2P04920 1241 aa20.74■□□□□ 0.91
PDE6D-201ENST00000287600 SSFA2P28290 1259 aa20.74■□□□□ 0.91
PDE6D-201ENST00000287600 SMIM5Q71RC9 77 aa20.74■□□□□ 0.91
PDE6D-201ENST00000287600 CD2APQ9Y5K6 639 aa20.74■□□□□ 0.91
PDE6D-201ENST00000287600 ATP6V1AP38606 617 aa20.73■□□□□ 0.91
PDE6D-201ENST00000287600 GNPATO15228 680 aa20.72■□□□□ 0.91
PDE6D-201ENST00000287600 ITPK1Q13572 414 aa20.72■□□□□ 0.91
PDE6D-201ENST00000287600 GOLGB1Q14789 3259 aaKnown RBP20.72■□□□□ 0.91
PDE6D-201ENST00000287600 ZEB1P37275 1124 aaPredicted RBP20.71■□□□□ 0.91
PDE6D-201ENST00000287600 MORC1Q86VD1 984 aa20.71■□□□□ 0.91
PDE6D-201ENST00000287600 ATG3Q9NT62 314 aa20.71■□□□□ 0.91
PDE6D-201ENST00000287600 PER1O15534 1290 aaPredicted RBP20.7■□□□□ 0.9
PDE6D-201ENST00000287600 GIGYF1O75420 1035 aaPredicted RBP20.7■□□□□ 0.9
PDE6D-201ENST00000287600 HSP90AB1P08238 724 aaKnown RBP20.7■□□□□ 0.9
PDE6D-201ENST00000287600 C1QTNF8P60827 252 aa20.7■□□□□ 0.9
PDE6D-201ENST00000287600 KDRP35968 1356 aa20.7■□□□□ 0.9
PDE6D-201ENST00000287600 SENP3-EIF4A1A0A087X0R7 540 aa20.69■□□□□ 0.9
PDE6D-201ENST00000287600 PLEKHO1Q53GL0 409 aaPredicted RBP20.69■□□□□ 0.9
PDE6D-201ENST00000287600 AMER1Q5JTC6 1135 aaPredicted RBP20.69■□□□□ 0.9
PDE6D-201ENST00000287600 ZNF831Q5JPB2 1677 aa20.69■□□□□ 0.9
PDE6D-201ENST00000287600 COL5A3P25940 1745 aaPredicted RBP20.68■□□□□ 0.9
PDE6D-201ENST00000287600 ZNF530Q6P9A1 599 aaPredicted RBP20.68■□□□□ 0.9
PDE6D-201ENST00000287600 DCAF5Q96JK2 942 aa20.68■□□□□ 0.9
PDE6D-201ENST00000287600 ERVV-2B6SEH9 535 aa20.67■□□□□ 0.9
PDE6D-201ENST00000287600 RBM42Q9BTD8 480 aaKnown RBP20.67■□□□□ 0.9
PDE6D-201ENST00000287600 KDM6AO15550 1401 aaPredicted RBP20.67■□□□□ 0.9
PDE6D-201ENST00000287600 AMOTQ4VCS5 1084 aa20.66■□□□□ 0.9
PDE6D-201ENST00000287600 CC2D1BQ5T0F9 858 aaKnown RBP20.65■□□□□ 0.9
PDE6D-201ENST00000287600 AEBP1Q8IUX7 1158 aa20.65■□□□□ 0.9
PDE6D-201ENST00000287600 WWC3Q9ULE0 1092 aa20.65■□□□□ 0.9
PDE6D-201ENST00000287600 CABP4P57796 275 aa20.64■□□□□ 0.89
PDE6D-201ENST00000287600 CNGB1Q14028 1251 aaPredicted RBP20.64■□□□□ 0.89
PDE6D-201ENST00000287600 C1orf141Q5JVX7 400 aa20.64■□□□□ 0.89
PDE6D-201ENST00000287600 RTCBQ9Y3I0 505 aaKnown RBP20.64■□□□□ 0.89
PDE6D-201ENST00000287600 ATP10DQ9P241 1426 aa20.63■□□□□ 0.89
PDE6D-201ENST00000287600 CACNB1Q02641 598 aaPredicted RBP20.63■□□□□ 0.89
PDE6D-201ENST00000287600 CICQ96RK0 1608 aaPredicted RBP20.63■□□□□ 0.89
PDE6D-201ENST00000287600 C4AP0C0L4 1744 aa20.62■□□□□ 0.89
PDE6D-201ENST00000287600 MTHFSP49914 203 aa20.62■□□□□ 0.89
PDE6D-201ENST00000287600 SULT6B1Q6IMI4 303 aa20.62■□□□□ 0.89
PDE6D-201ENST00000287600 SLC4A9Q96Q91 983 aa20.62■□□□□ 0.89
PDE6D-201ENST00000287600 CNTNAP4Q9C0A0 1308 aa20.61■□□□□ 0.89
PDE6D-201ENST00000287600 MMP10P09238 476 aa20.61■□□□□ 0.89
PDE6D-201ENST00000287600 TRAPPC3LQ5T215 181 aa20.61■□□□□ 0.89
PDE6D-201ENST00000287600 KIF13BQ9NQT8 1826 aa20.61■□□□□ 0.89
PDE6D-201ENST00000287600 SCN11AQ9UI33 1791 aa20.6■□□□□ 0.89
PDE6D-201ENST00000287600 ADCY9O60503 1353 aa20.59■□□□□ 0.89
PDE6D-201ENST00000287600 TJP1Q07157 1748 aa20.58■□□□□ 0.89
PDE6D-201ENST00000287600 RC3H1Q5TC82 1133 aaKnown RBP20.58■□□□□ 0.89
PDE6D-201ENST00000287600 N4BP2Q86UW6 1770 aaPredicted RBP20.58■□□□□ 0.89
PDE6D-201ENST00000287600 KIAA1551Q9HCM1 1747 aa20.58■□□□□ 0.88
PDE6D-201ENST00000287600 MYH14Q7Z406 1995 aaKnown RBP20.57■□□□□ 0.88
PDE6D-201ENST00000287600 PXDNLA1KZ92 1463 aa20.57■□□□□ 0.88
PDE6D-201ENST00000287600 PTCD1O75127 700 aaKnown RBP20.57■□□□□ 0.88
PDE6D-201ENST00000287600 IL13P35225 146 aa20.57■□□□□ 0.88
PDE6D-201ENST00000287600 NLGN1Q8N2Q7 840 aa20.57■□□□□ 0.88
PDE6D-201ENST00000287600 ARHGEF1Q92888 912 aaKnown RBP20.57■□□□□ 0.88
PDE6D-201ENST00000287600 U3KPZ7 1027 aaPredicted RBP20.57■□□□□ 0.88
PDE6D-201ENST00000287600 NPC1L1Q9UHC9 1359 aa20.57■□□□□ 0.88
PDE6D-201ENST00000287600 C10orf71Q711Q0 1435 aa20.56■□□□□ 0.88
PDE6D-201ENST00000287600 RFC4P35249 363 aa20.56■□□□□ 0.88
PDE6D-201ENST00000287600 GPBP1L1Q9HC44 474 aaPredicted RBP20.56■□□□□ 0.88
PDE6D-201ENST00000287600 VIRMAQ69YN4 1812 aaKnown RBP20.55■□□□□ 0.88
PDE6D-201ENST00000287600 RPS6KA4O75676 772 aa20.55■□□□□ 0.88
PDE6D-201ENST00000287600 C1QBPQ07021 282 aaKnown RBP20.55■□□□□ 0.88
PDE6D-201ENST00000287600 NFATC2IPQ8NCF5 419 aa20.55■□□□□ 0.88
PDE6D-201ENST00000287600 GYS1P13807 737 aa20.54■□□□□ 0.88
PDE6D-201ENST00000287600 ZNF526Q8TF50 670 aaPredicted RBP20.54■□□□□ 0.88
PDE6D-201ENST00000287600 CCDC87Q9NVE4 849 aa20.53■□□□□ 0.88
PDE6D-201ENST00000287600 CRKLP46109 303 aaKnown RBP20.52■□□□□ 0.88
PDE6D-201ENST00000287600 AKAP4Q5JQC9 854 aa20.52■□□□□ 0.88
PDE6D-201ENST00000287600 PARP3Q9Y6F1 533 aa20.52■□□□□ 0.88
PDE6D-201ENST00000287600 MRC1P22897 1456 aa20.51■□□□□ 0.87
PDE6D-201ENST00000287600 TGFB2P61812 414 aa20.51■□□□□ 0.87
PDE6D-201ENST00000287600 HMOX1P09601 288 aa20.5■□□□□ 0.87
PDE6D-201ENST00000287600 BCS1LQ9Y276 419 aa20.5■□□□□ 0.87
PDE6D-201ENST00000287600 BRCA1P38398 1863 aaKnown RBP20.5■□□□□ 0.87
PDE6D-201ENST00000287600 A0A0G2JLW4 131 aa20.49■□□□□ 0.87
PDE6D-201ENST00000287600 DDX10Q13206 875 aaKnown RBP20.49■□□□□ 0.87
PDE6D-201ENST00000287600 SLC52A2Q9HAB3 445 aa20.48■□□□□ 0.87
PDE6D-201ENST00000287600 SRP68Q9UHB9 627 aaKnown RBP20.48■□□□□ 0.87
PDE6D-201ENST00000287600 USP42Q9H9J4 1324 aaKnown RBP20.48■□□□□ 0.87
PDE6D-201ENST00000287600 ADAMTS7Q9UKP4 1686 aa20.47■□□□□ 0.87
PDE6D-201ENST00000287600 DIAPH1O60610 1272 aaKnown RBP20.46■□□□□ 0.87
PDE6D-201ENST00000287600 DPEP1P16444 411 aa20.46■□□□□ 0.87
PDE6D-201ENST00000287600 LGR6Q9HBX8 967 aa20.46■□□□□ 0.87
PDE6D-201ENST00000287600 KCPQ6ZWJ8 1503 aa20.45■□□□□ 0.86
PDE6D-201ENST00000287600 RNMTO43148 476 aaKnown RBP20.45■□□□□ 0.86
PDE6D-201ENST00000287600 DNAJC10Q8IXB1 793 aa20.45■□□□□ 0.86
PDE6D-201ENST00000287600 ARFGEF1Q9Y6D6 1849 aa20.45■□□□□ 0.86
PDE6D-201ENST00000287600 FCHSD2O94868 740 aa20.44■□□□□ 0.86
PDE6D-201ENST00000287600 FKBP8Q14318 412 aa20.44■□□□□ 0.86
PDE6D-201ENST00000287600 INTS5Q6P9B9 1019 aaKnown RBP20.44■□□□□ 0.86
Retrieved 100 of 20,778 RNA–protein pairs in 43.6 ms