RNA–Protein interactions for RNA: ENST00000285814.8

NIFK-201, Transcript of nucleolar protein interacting with the FHA domain of MKI67, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NIFK, Length 1,734 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIFK-201ENST00000285814 SLC52A2Q9HAB3 445 aa23.62■■□□□ 1.37
NIFK-201ENST00000285814 KRT24Q2M2I5 525 aa23.61■■□□□ 1.37
NIFK-201ENST00000285814 SSH1Q8WYL5 1049 aa23.61■■□□□ 1.37
NIFK-201ENST00000285814 USP21Q9UK80 565 aa23.61■■□□□ 1.37
NIFK-201ENST00000285814 BTBD11A6QL63 1104 aa23.6■■□□□ 1.37
NIFK-201ENST00000285814 ELL2O00472 640 aaPredicted RBP23.6■■□□□ 1.37
NIFK-201ENST00000285814 DDX54Q8TDD1 881 aaKnown RBP23.6■■□□□ 1.37
NIFK-201ENST00000285814 BCL2L13Q9BXK5 485 aa23.6■■□□□ 1.37
NIFK-201ENST00000285814 CCDC9Q9Y3X0 531 aaKnown RBP23.6■■□□□ 1.37
NIFK-201ENST00000285814 ERICH6BQ5W0A0 696 aa23.59■■□□□ 1.37
NIFK-201ENST00000285814 TOGARAM1Q9Y4F4 1720 aa23.59■■□□□ 1.37
NIFK-201ENST00000285814 SMC4Q9NTJ3 1288 aa23.59■■□□□ 1.37
NIFK-201ENST00000285814 SOS1Q07889 1333 aaPredicted RBP23.58■■□□□ 1.37
NIFK-201ENST00000285814 EXOC5O00471 708 aa23.58■■□□□ 1.37
NIFK-201ENST00000285814 BRPF1P55201 1214 aaPredicted RBP23.58■■□□□ 1.37
NIFK-201ENST00000285814 ERVV-2B6SEH9 535 aa23.56■■□□□ 1.36
NIFK-201ENST00000285814 AFF2P51816 1311 aa23.56■■□□□ 1.36
NIFK-201ENST00000285814 EIF4A1P60842 406 aaKnown RBP23.56■■□□□ 1.36
NIFK-201ENST00000285814 NFATC2IPQ8NCF5 419 aa23.56■■□□□ 1.36
NIFK-201ENST00000285814 KCNQ3O43525 872 aa23.54■■□□□ 1.36
NIFK-201ENST00000285814 KIF16BQ96L93 1317 aa23.53■■□□□ 1.36
NIFK-201ENST00000285814 CABP4P57796 275 aa23.53■■□□□ 1.36
NIFK-201ENST00000285814 DDB1Q16531 1140 aa23.53■■□□□ 1.36
NIFK-201ENST00000285814 C20orf194Q5TEA3 1177 aa23.53■■□□□ 1.36
NIFK-201ENST00000285814 ATRNO75882 1429 aa23.53■■□□□ 1.36
NIFK-201ENST00000285814 HEG1Q9ULI3 1381 aa23.53■■□□□ 1.36
NIFK-201ENST00000285814 THSD7AQ9UPZ6 1657 aa23.53■■□□□ 1.36
NIFK-201ENST00000285814 PAPPAQ13219 1627 aa23.53■■□□□ 1.36
NIFK-201ENST00000285814 GLI3P10071 1580 aa23.53■■□□□ 1.36
NIFK-201ENST00000285814 MRPL50Q8N5N7 158 aaKnown RBP23.53■■□□□ 1.36
NIFK-201ENST00000285814 FRAT1Q92837 279 aaPredicted RBP23.53■■□□□ 1.36
NIFK-201ENST00000285814 HOXB7P09629 217 aa23.52■■□□□ 1.36
NIFK-201ENST00000285814 CANXP27824 592 aaKnown RBP23.52■■□□□ 1.36
NIFK-201ENST00000285814 PDE3AQ14432 1141 aa23.52■■□□□ 1.36
NIFK-201ENST00000285814 ZNF790Q6PG37 636 aa23.51■■□□□ 1.35
NIFK-201ENST00000285814 FAM98CQ17RN3 349 aaKnown RBP23.5■■□□□ 1.35
NIFK-201ENST00000285814 ITGB4P16144 1822 aa23.5■■□□□ 1.35
NIFK-201ENST00000285814 ZKSCAN2Q63HK3 967 aa23.5■■□□□ 1.35
NIFK-201ENST00000285814 UBR2Q8IWV8 1755 aa23.49■■□□□ 1.35
NIFK-201ENST00000285814 SLC39A6Q13433 755 aa23.48■■□□□ 1.35
NIFK-201ENST00000285814 FBXO41Q8TF61 875 aa23.48■■□□□ 1.35
NIFK-201ENST00000285814 TRPC5Q9UL62 973 aaPredicted RBP23.48■■□□□ 1.35
NIFK-201ENST00000285814 NOB1Q9ULX3 412 aaKnown RBP23.48■■□□□ 1.35
NIFK-201ENST00000285814 DOT1LQ8TEK3 1739 aa23.48■■□□□ 1.35
NIFK-201ENST00000285814 TCERG1O14776 1098 aaKnown RBP23.47■■□□□ 1.35
NIFK-201ENST00000285814 GJD4Q96KN9 370 aaPredicted RBP23.47■■□□□ 1.35
NIFK-201ENST00000285814 IPO8O15397 1037 aaKnown RBP23.47■■□□□ 1.35
NIFK-201ENST00000285814 CRBNQ96SW2 442 aa23.47■■□□□ 1.35
NIFK-201ENST00000285814 CACNA1FO60840 1977 aa23.47■■□□□ 1.35
NIFK-201ENST00000285814 CCDC30Q5VVM6 783 aa23.46■■□□□ 1.35
NIFK-201ENST00000285814 ATF7IPQ6VMQ6 1270 aa23.46■■□□□ 1.35
NIFK-201ENST00000285814 EXOC6Q8TAG9 804 aa23.46■■□□□ 1.35
NIFK-201ENST00000285814 C5P01031 1676 aa23.46■■□□□ 1.35
NIFK-201ENST00000285814 GIGYF1O75420 1035 aaPredicted RBP23.45■■□□□ 1.34
NIFK-201ENST00000285814 TRIM27P14373 513 aa23.45■■□□□ 1.34
NIFK-201ENST00000285814 TTC5Q8N0Z6 440 aa23.45■■□□□ 1.34
NIFK-201ENST00000285814 MARCH10Q8NA82 808 aaPredicted RBP23.45■■□□□ 1.34
NIFK-201ENST00000285814 ARHGAP45Q92619 1136 aa23.45■■□□□ 1.34
NIFK-201ENST00000285814 CHMP4AQ9BY43 222 aa23.45■■□□□ 1.34
NIFK-201ENST00000285814 TMOD3Q9NYL9 352 aa23.45■■□□□ 1.34
NIFK-201ENST00000285814 TNNQ9UQP3 1299 aa23.45■■□□□ 1.34
NIFK-201ENST00000285814 MS4A1P11836 297 aa23.44■■□□□ 1.34
NIFK-201ENST00000285814 HDGFL1Q5TGJ6 251 aa23.44■■□□□ 1.34
NIFK-201ENST00000285814 KCPQ6ZWJ8 1503 aa23.43■■□□□ 1.34
NIFK-201ENST00000285814 BCL9O00512 1426 aa23.43■■□□□ 1.34
NIFK-201ENST00000285814 PANK1Q8TE04 598 aa23.43■■□□□ 1.34
NIFK-201ENST00000285814 ZNF496Q96IT1 587 aaPredicted RBP23.43■■□□□ 1.34
NIFK-201ENST00000285814 PPP4R2Q9NY27 417 aa23.43■■□□□ 1.34
NIFK-201ENST00000285814 RLBP1P12271 317 aa23.42■■□□□ 1.34
NIFK-201ENST00000285814 DZIP1LQ8IYY4 767 aaKnown RBP23.42■■□□□ 1.34
NIFK-201ENST00000285814 STK31Q9BXU1 1019 aa23.42■■□□□ 1.34
NIFK-201ENST00000285814 ONECUT3O60422 494 aaPredicted RBP23.42■■□□□ 1.34
NIFK-201ENST00000285814 SLC4A2P04920 1241 aa23.42■■□□□ 1.34
NIFK-201ENST00000285814 FMNL2Q96PY5 1086 aa23.42■■□□□ 1.34
NIFK-201ENST00000285814 LAMB4A4D0S4 1761 aa23.41■■□□□ 1.34
NIFK-201ENST00000285814 PIGBQ92521 554 aa23.41■■□□□ 1.34
NIFK-201ENST00000285814 FTSJ3Q8IY81 847 aaKnown RBP23.4■■□□□ 1.34
NIFK-201ENST00000285814 CLUAP1Q96AJ1 413 aa23.4■■□□□ 1.34
NIFK-201ENST00000285814 QTRT2Q9H974 415 aaKnown RBP23.4■■□□□ 1.34
NIFK-201ENST00000285814 NECTIN2Q92692 538 aa23.39■■□□□ 1.34
NIFK-201ENST00000285814 PTPRCP08575 1304 aa23.39■■□□□ 1.34
NIFK-201ENST00000285814 PRAMEF22A3QJZ6 481 aa23.39■■□□□ 1.33
NIFK-201ENST00000285814 RGS12O14924 1447 aa23.38■■□□□ 1.33
NIFK-201ENST00000285814 A0A0G2JS52 829 aa23.38■■□□□ 1.33
NIFK-201ENST00000285814 SNRPA1P09661 255 aaKnown RBP23.38■■□□□ 1.33
NIFK-201ENST00000285814 EIF2S2P20042 333 aaKnown RBP23.38■■□□□ 1.33
NIFK-201ENST00000285814 MYT1Q01538 1121 aa23.38■■□□□ 1.33
NIFK-201ENST00000285814 API5Q9BZZ5 524 aaKnown RBP23.38■■□□□ 1.33
NIFK-201ENST00000285814 COG6Q9Y2V7 657 aa23.38■■□□□ 1.33
NIFK-201ENST00000285814 ABCC4O15439 1325 aa23.36■■□□□ 1.33
NIFK-201ENST00000285814 PRIM1P49642 420 aaKnown RBP23.36■■□□□ 1.33
NIFK-201ENST00000285814 MVPQ14764 893 aaKnown RBP23.36■■□□□ 1.33
NIFK-201ENST00000285814 G2E3Q7L622 706 aa23.36■■□□□ 1.33
NIFK-201ENST00000285814 ATG3Q9NT62 314 aa23.35■■□□□ 1.33
NIFK-201ENST00000285814 CHPF2Q9P2E5 772 aa23.35■■□□□ 1.33
NIFK-201ENST00000285814 ZNF772Q68DY9 489 aaPredicted RBP23.34■■□□□ 1.33
NIFK-201ENST00000285814 DBF4Q9UBU7 674 aaPredicted RBP23.34■■□□□ 1.33
NIFK-201ENST00000285814 ASAP1Q9ULH1 1129 aa23.34■■□□□ 1.33
NIFK-201ENST00000285814 KAT6BQ8WYB5 2073 aa23.34■■□□□ 1.33
NIFK-201ENST00000285814 FLIIQ13045 1269 aa23.33■■□□□ 1.33
Retrieved 100 of 20,778 RNA–protein pairs in 16.1 ms