RNA–Protein interactions for RNA: ENST00000285398.6

ERCC3-201, Transcript of ERCC excision repair 3, TFIIH core complex helicase subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ERCC3, Length 2,750 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC3-201ENST00000285398 ROBO1Q9Y6N7 1651 aa13□□□□□ -0.33
ERCC3-201ENST00000285398 TOM1O60784 492 aa13□□□□□ -0.33
ERCC3-201ENST00000285398 ANKRD24Q8TF21 1146 aa13□□□□□ -0.33
ERCC3-201ENST00000285398 HDAC1Q13547 482 aaPredicted RBP12.99□□□□□ -0.33
ERCC3-201ENST00000285398 PRDM11Q9NQV5 511 aa12.99□□□□□ -0.33
ERCC3-201ENST00000285398 USP54Q70EL1 1684 aa12.99□□□□□ -0.33
ERCC3-201ENST00000285398 RBM10P98175 930 aaKnown RBP12.99□□□□□ -0.33
ERCC3-201ENST00000285398 TRIM35Q9UPQ4 493 aa12.99□□□□□ -0.33
ERCC3-201ENST00000285398 LTN1O94822 1766 aa12.99□□□□□ -0.33
ERCC3-201ENST00000285398 ARHGEF10O15013 1369 aa12.99□□□□□ -0.33
ERCC3-201ENST00000285398 ZKSCAN2Q63HK3 967 aa12.98□□□□□ -0.33
ERCC3-201ENST00000285398 FAM13BQ9NYF5 915 aa12.98□□□□□ -0.33
ERCC3-201ENST00000285398 NUTM2BA6NNL0 878 aaPredicted RBP12.98□□□□□ -0.33
ERCC3-201ENST00000285398 NUTM2EB1AL46 878 aaPredicted RBP12.98□□□□□ -0.33
ERCC3-201ENST00000285398 NUTM2AQ8IVF1 878 aaPredicted RBP12.98□□□□□ -0.33
ERCC3-201ENST00000285398 DZIP1LQ8IYY4 767 aaKnown RBP12.98□□□□□ -0.33
ERCC3-201ENST00000285398 SLIT3O75094 1523 aa12.97□□□□□ -0.33
ERCC3-201ENST00000285398 ADAMTS2O95450 1211 aa12.97□□□□□ -0.33
ERCC3-201ENST00000285398 CSB-PGBD3P0DP91 1061 aa12.97□□□□□ -0.33
ERCC3-201ENST00000285398 KLHL40Q2TBA0 621 aa12.97□□□□□ -0.33
ERCC3-201ENST00000285398 DHX37Q8IY37 1157 aaKnown RBP12.97□□□□□ -0.33
ERCC3-201ENST00000285398 FTSJ3Q8IY81 847 aaKnown RBP12.97□□□□□ -0.33
ERCC3-201ENST00000285398 TSR2Q969E8 191 aaKnown RBP12.97□□□□□ -0.33
ERCC3-201ENST00000285398 NLRP2Q9NX02 1062 aa12.97□□□□□ -0.33
ERCC3-201ENST00000285398 IGSF1Q8N6C5 1336 aa12.97□□□□□ -0.33
ERCC3-201ENST00000285398 CT47B1P0C2W7 299 aaPredicted RBP12.97□□□□□ -0.33
ERCC3-201ENST00000285398 SMAP1Q8IYB5 467 aaPredicted RBP12.97□□□□□ -0.33
ERCC3-201ENST00000285398 CERKQ8TCT0 537 aa12.97□□□□□ -0.33
ERCC3-201ENST00000285398 STRN4Q9NRL3 753 aa12.97□□□□□ -0.33
ERCC3-201ENST00000285398 R3HCC1Q9Y3T6 440 aaKnown RBP12.97□□□□□ -0.33
ERCC3-201ENST00000285398 NHSL1Q5SYE7 1610 aa12.96□□□□□ -0.33
ERCC3-201ENST00000285398 MTHFSDQ2M296 383 aaKnown RBP12.96□□□□□ -0.33
ERCC3-201ENST00000285398 ZNF500O60304 480 aaPredicted RBP12.96□□□□□ -0.34
ERCC3-201ENST00000285398 MCM10Q7L590 875 aa12.96□□□□□ -0.34
ERCC3-201ENST00000285398 ERBB3P21860 1342 aa12.95□□□□□ -0.34
ERCC3-201ENST00000285398 A0A0U1RQG5 324 aaPredicted RBP12.95□□□□□ -0.34
ERCC3-201ENST00000285398 CLEC17AQ6ZS10 378 aa12.95□□□□□ -0.34
ERCC3-201ENST00000285398 CHMP4AQ9BY43 222 aa12.95□□□□□ -0.34
ERCC3-201ENST00000285398 NOL7Q9UMY1 257 aaKnown RBP12.95□□□□□ -0.34
ERCC3-201ENST00000285398 DDX49Q9Y6V7 483 aaKnown RBP12.95□□□□□ -0.34
ERCC3-201ENST00000285398 NFE2L2Q16236 605 aa12.95□□□□□ -0.34
ERCC3-201ENST00000285398 CSPP1Q1MSJ5 1256 aa12.95□□□□□ -0.34
ERCC3-201ENST00000285398 DYNC1I1O14576 645 aa12.94□□□□□ -0.34
ERCC3-201ENST00000285398 DDX19BQ9UMR2 479 aa12.94□□□□□ -0.34
ERCC3-201ENST00000285398 RTL1A6NKG5 1358 aa12.93□□□□□ -0.34
ERCC3-201ENST00000285398 UQCRHLA0A096LP55 91 aa12.93□□□□□ -0.34
ERCC3-201ENST00000285398 UQCRHP07919 91 aa12.93□□□□□ -0.34
ERCC3-201ENST00000285398 TAF7LQ5H9L4 462 aa12.93□□□□□ -0.34
ERCC3-201ENST00000285398 ZNF445P59923 1031 aa12.93□□□□□ -0.34
ERCC3-201ENST00000285398 RGPD5Q99666 1765 aa12.93□□□□□ -0.34
ERCC3-201ENST00000285398 K7ELQ4 463 aaPredicted RBP12.92□□□□□ -0.34
ERCC3-201ENST00000285398 TRIM27P14373 513 aa12.92□□□□□ -0.34
ERCC3-201ENST00000285398 PHRF1Q9P1Y6 1649 aaKnown RBP12.92□□□□□ -0.34
ERCC3-201ENST00000285398 KIF24Q5T7B8 1368 aa12.92□□□□□ -0.34
ERCC3-201ENST00000285398 RGPD2P0DJD1 1756 aa12.92□□□□□ -0.34
ERCC3-201ENST00000285398 MCM5P33992 734 aa12.92□□□□□ -0.34
ERCC3-201ENST00000285398 MIS18AQ9NYP9 233 aa12.92□□□□□ -0.34
ERCC3-201ENST00000285398 KDRP35968 1356 aa12.91□□□□□ -0.34
ERCC3-201ENST00000285398 SMC4Q9NTJ3 1288 aa12.91□□□□□ -0.34
ERCC3-201ENST00000285398 BTG4Q9NY30 223 aa12.91□□□□□ -0.34
ERCC3-201ENST00000285398 CRYBG1Q9Y4K1 1723 aa12.91□□□□□ -0.34
ERCC3-201ENST00000285398 LARP1Q6PKG0 1096 aaKnown RBP12.91□□□□□ -0.34
ERCC3-201ENST00000285398 AHDC1Q5TGY3 1603 aaPredicted RBP12.91□□□□□ -0.34
ERCC3-201ENST00000285398 ELL2O00472 640 aaPredicted RBP12.9□□□□□ -0.34
ERCC3-201ENST00000285398 NUCB1Q02818 461 aa12.9□□□□□ -0.34
ERCC3-201ENST00000285398 TOM1L2Q6ZVM7 507 aa12.9□□□□□ -0.34
ERCC3-201ENST00000285398 ITPRIPQ8IWB1 547 aa12.9□□□□□ -0.34
ERCC3-201ENST00000285398 PDLIM2Q96JY6 352 aa12.9□□□□□ -0.34
ERCC3-201ENST00000285398 RGPD1P0DJD0 1748 aa12.9□□□□□ -0.34
ERCC3-201ENST00000285398 BAG4O95429 457 aaKnown RBP12.9□□□□□ -0.34
ERCC3-201ENST00000285398 ATF7IPQ6VMQ6 1270 aa12.9□□□□□ -0.34
ERCC3-201ENST00000285398 KIF2CQ99661 725 aa12.9□□□□□ -0.34
ERCC3-201ENST00000285398 CAMTA1Q9Y6Y1 1673 aa12.89□□□□□ -0.35
ERCC3-201ENST00000285398 SSFA2P28290 1259 aa12.89□□□□□ -0.35
ERCC3-201ENST00000285398 EVA1CP58658 441 aa12.89□□□□□ -0.35
ERCC3-201ENST00000285398 PLCB2Q00722 1185 aa12.89□□□□□ -0.35
ERCC3-201ENST00000285398 ZBTB40Q9NUA8 1239 aa12.89□□□□□ -0.35
ERCC3-201ENST00000285398 ZKSCAN5Q9Y2L8 839 aa12.89□□□□□ -0.35
ERCC3-201ENST00000285398 CPDO75976 1380 aa12.88□□□□□ -0.35
ERCC3-201ENST00000285398 BMP2KLQ5H9B9 411 aa12.88□□□□□ -0.35
ERCC3-201ENST00000285398 PHLPP1O60346 1717 aa12.88□□□□□ -0.35
ERCC3-201ENST00000285398 HSPA1LP34931 641 aa12.88□□□□□ -0.35
ERCC3-201ENST00000285398 KRT24Q2M2I5 525 aa12.88□□□□□ -0.35
ERCC3-201ENST00000285398 SASS6Q6UVJ0 657 aa12.88□□□□□ -0.35
ERCC3-201ENST00000285398 SSH1Q8WYL5 1049 aa12.88□□□□□ -0.35
ERCC3-201ENST00000285398 FOXD4L1Q9NU39 408 aa12.88□□□□□ -0.35
ERCC3-201ENST00000285398 COL16A1Q07092 1604 aaPredicted RBP12.88□□□□□ -0.35
ERCC3-201ENST00000285398 KIF16BQ96L93 1317 aa12.87□□□□□ -0.35
ERCC3-201ENST00000285398 EXOSC9Q06265 439 aaKnown RBP12.87□□□□□ -0.35
ERCC3-201ENST00000285398 ZSCAN23Q3MJ62 389 aa12.87□□□□□ -0.35
ERCC3-201ENST00000285398 MPRIPQ6WCQ1 1025 aa12.87□□□□□ -0.35
ERCC3-201ENST00000285398 EP400Q96L91 3159 aa12.87□□□□□ -0.35
ERCC3-201ENST00000285398 NUCB2P80303 420 aa12.86□□□□□ -0.35
ERCC3-201ENST00000285398 UTP14CQ5TAP6 766 aaKnown RBP12.86□□□□□ -0.35
ERCC3-201ENST00000285398 ZNF530Q6P9A1 599 aaPredicted RBP12.86□□□□□ -0.35
ERCC3-201ENST00000285398 TMEM57Q8N5G2 664 aa12.86□□□□□ -0.35
ERCC3-201ENST00000285398 LGR6Q9HBX8 967 aa12.86□□□□□ -0.35
ERCC3-201ENST00000285398 EIF2AK3Q9NZJ5 1116 aaKnown RBP12.86□□□□□ -0.35
ERCC3-201ENST00000285398 COL18A1P39060 1754 aa12.86□□□□□ -0.35
ERCC3-201ENST00000285398 CD2BP2O95400 341 aaKnown RBP12.86□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 7.3 ms