RNA–Protein interactions for RNA: ENST00000284767.9

PDLIM3-201, Transcript of PDZ and LIM domain 3, humanhuman

TSL 5 BASIC

Gene PDLIM3, Length 2,589 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM3-201ENST00000284767 HAP1P54257 671 aaPredicted RBP22.81■■□□□ 1.24
PDLIM3-201ENST00000284767 SIRT2Q8IXJ6 389 aa22.81■■□□□ 1.24
PDLIM3-201ENST00000284767 ERBB3P21860 1342 aa22.8■■□□□ 1.24
PDLIM3-201ENST00000284767 EIF5BO60841 1220 aaKnown RBP22.8■■□□□ 1.24
PDLIM3-201ENST00000284767 BRINP3Q76B58 766 aa22.8■■□□□ 1.24
PDLIM3-201ENST00000284767 SMC5Q8IY18 1101 aa22.8■■□□□ 1.24
PDLIM3-201ENST00000284767 KCNQ3O43525 872 aa22.79■■□□□ 1.24
PDLIM3-201ENST00000284767 MFAP1P55081 439 aaKnown RBP22.79■■□□□ 1.24
PDLIM3-201ENST00000284767 CEMIPQ8WUJ3 1361 aa22.78■■□□□ 1.24
PDLIM3-201ENST00000284767 XRCC6P12956 609 aaKnown RBP eCLIP22.78■■□□□ 1.24
PDLIM3-201ENST00000284767 PLEKHO1Q53GL0 409 aaPredicted RBP22.78■■□□□ 1.24
PDLIM3-201ENST00000284767 RRAGDQ9NQL2 400 aaPredicted RBP22.78■■□□□ 1.24
PDLIM3-201ENST00000284767 INTS3Q68E01 1043 aaKnown RBP22.77■■□□□ 1.24
PDLIM3-201ENST00000284767 TNS3Q68CZ2 1445 aa22.77■■□□□ 1.24
PDLIM3-201ENST00000284767 SLC4A10Q6U841 1118 aa22.77■■□□□ 1.24
PDLIM3-201ENST00000284767 NLRP2Q9NX02 1062 aa22.77■■□□□ 1.24
PDLIM3-201ENST00000284767 HSCBQ8IWL3 235 aa22.76■■□□□ 1.23
PDLIM3-201ENST00000284767 LNPKQ9C0E8 428 aa22.76■■□□□ 1.23
PDLIM3-201ENST00000284767 PTPRCP08575 1304 aa22.76■■□□□ 1.23
PDLIM3-201ENST00000284767 SPATA31A3Q5VYP0 1347 aa22.76■■□□□ 1.23
PDLIM3-201ENST00000284767 AKAP4Q5JQC9 854 aa22.75■■□□□ 1.23
PDLIM3-201ENST00000284767 SPRYD3Q8NCJ5 442 aa22.75■■□□□ 1.23
PDLIM3-201ENST00000284767 NCAPD2Q15021 1401 aa22.75■■□□□ 1.23
PDLIM3-201ENST00000284767 TRAK2O60296 914 aa22.74■■□□□ 1.23
PDLIM3-201ENST00000284767 DDX11L8A8MPP1 907 aa22.74■■□□□ 1.23
PDLIM3-201ENST00000284767 MEIS3Q99687 375 aa22.74■■□□□ 1.23
PDLIM3-201ENST00000284767 STK31Q9BXU1 1019 aa22.74■■□□□ 1.23
PDLIM3-201ENST00000284767 SLAIN2Q9P270 581 aa22.73■■□□□ 1.23
PDLIM3-201ENST00000284767 TEFQ10587 303 aa22.72■■□□□ 1.23
PDLIM3-201ENST00000284767 AMOTQ4VCS5 1084 aa22.72■■□□□ 1.23
PDLIM3-201ENST00000284767 C1orf141Q5JVX7 400 aa22.72■■□□□ 1.23
PDLIM3-201ENST00000284767 UBE2Q2Q8WVN8 375 aa22.72■■□□□ 1.23
PDLIM3-201ENST00000284767 EIF2S2P20042 333 aaKnown RBP22.72■■□□□ 1.23
PDLIM3-201ENST00000284767 NUCB1Q02818 461 aa22.72■■□□□ 1.23
PDLIM3-201ENST00000284767 CCDC30Q5VVM6 783 aa22.72■■□□□ 1.23
PDLIM3-201ENST00000284767 CHMP4BQ9H444 224 aaKnown RBP22.72■■□□□ 1.23
PDLIM3-201ENST00000284767 RNMTO43148 476 aaKnown RBP22.71■■□□□ 1.23
PDLIM3-201ENST00000284767 CSB-PGBD3P0DP91 1061 aa22.71■■□□□ 1.23
PDLIM3-201ENST00000284767 RBM25P49756 843 aaKnown RBP22.71■■□□□ 1.23
PDLIM3-201ENST00000284767 FLIIQ13045 1269 aa22.71■■□□□ 1.23
PDLIM3-201ENST00000284767 ISY1Q9ULR0 285 aaKnown RBP22.71■■□□□ 1.23
PDLIM3-201ENST00000284767 ANKRD45Q5TZF3 282 aa22.71■■□□□ 1.23
PDLIM3-201ENST00000284767 SNX21Q969T3 373 aa22.71■■□□□ 1.23
PDLIM3-201ENST00000284767 LMO7Q8WWI1 1683 aa22.7■■□□□ 1.23
PDLIM3-201ENST00000284767 BTBD11A6QL63 1104 aa22.7■■□□□ 1.22
PDLIM3-201ENST00000284767 MRE11P49959 708 aa22.7■■□□□ 1.22
PDLIM3-201ENST00000284767 EIF4A1P60842 406 aaKnown RBP22.7■■□□□ 1.22
PDLIM3-201ENST00000284767 FKBP5Q13451 457 aaPredicted RBP22.7■■□□□ 1.22
PDLIM3-201ENST00000284767 HDGFL1Q5TGJ6 251 aa22.7■■□□□ 1.22
PDLIM3-201ENST00000284767 FAM208AQ9UK61 1670 aaKnown RBP22.7■■□□□ 1.22
PDLIM3-201ENST00000284767 CAMTA1Q9Y6Y1 1673 aa22.69■■□□□ 1.22
PDLIM3-201ENST00000284767 CHD1LQ86WJ1 897 aa22.69■■□□□ 1.22
PDLIM3-201ENST00000284767 PHAXQ9H814 394 aaKnown RBP22.69■■□□□ 1.22
PDLIM3-201ENST00000284767 DDIT3P35638 169 aa22.69■■□□□ 1.22
PDLIM3-201ENST00000284767 BABAM1Q9NWV8 329 aa22.69■■□□□ 1.22
PDLIM3-201ENST00000284767 GZF1Q9H116 711 aaPredicted RBP22.68■■□□□ 1.22
PDLIM3-201ENST00000284767 COL18A1P39060 1754 aa22.68■■□□□ 1.22
PDLIM3-201ENST00000284767 RAPGEF4Q8WZA2 1011 aa22.67■■□□□ 1.22
PDLIM3-201ENST00000284767 ANXA1P04083 346 aa22.67■■□□□ 1.22
PDLIM3-201ENST00000284767 ATP10DQ9P241 1426 aa22.67■■□□□ 1.22
PDLIM3-201ENST00000284767 MEGF6O75095 1541 aa22.66■■□□□ 1.22
PDLIM3-201ENST00000284767 CIZ1Q9ULV3 898 aaPredicted RBP22.66■■□□□ 1.22
PDLIM3-201ENST00000284767 PRAMEF22A3QJZ6 481 aa22.65■■□□□ 1.22
PDLIM3-201ENST00000284767 CLCN1P35523 988 aa22.65■■□□□ 1.22
PDLIM3-201ENST00000284767 CRYBG1Q9Y4K1 1723 aa22.65■■□□□ 1.22
PDLIM3-201ENST00000284767 GCC1Q96CN9 775 aa22.65■■□□□ 1.22
PDLIM3-201ENST00000284767 CEP85Q6P2H3 762 aa22.64■■□□□ 1.22
PDLIM3-201ENST00000284767 PANK2Q9BZ23 570 aa22.64■■□□□ 1.22
PDLIM3-201ENST00000284767 KDM3BQ7LBC6 1761 aa22.64■■□□□ 1.22
PDLIM3-201ENST00000284767 ARXQ96QS3 562 aa22.64■■□□□ 1.21
PDLIM3-201ENST00000284767 CHPF2Q9P2E5 772 aa22.64■■□□□ 1.21
PDLIM3-201ENST00000284767 ANKRD44Q8N8A2 993 aa22.63■■□□□ 1.21
PDLIM3-201ENST00000284767 SOS2Q07890 1332 aaPredicted RBP22.62■■□□□ 1.21
PDLIM3-201ENST00000284767 APBB1O00213 710 aa22.62■■□□□ 1.21
PDLIM3-201ENST00000284767 TATP17735 454 aaPredicted RBP22.62■■□□□ 1.21
PDLIM3-201ENST00000284767 BMP2KLQ5H9B9 411 aa22.62■■□□□ 1.21
PDLIM3-201ENST00000284767 CCT4P50991 539 aaKnown RBP22.61■■□□□ 1.21
PDLIM3-201ENST00000284767 GRPEL1Q9HAV7 217 aa22.61■■□□□ 1.21
PDLIM3-201ENST00000284767 PTMSP20962 102 aa22.61■■□□□ 1.21
PDLIM3-201ENST00000284767 PRDM11Q9NQV5 511 aa22.61■■□□□ 1.21
PDLIM3-201ENST00000284767 SLC39A6Q13433 755 aa22.6■■□□□ 1.21
PDLIM3-201ENST00000284767 GBP4Q96PP9 640 aa22.59■■□□□ 1.21
PDLIM3-201ENST00000284767 DCTPP1Q9H773 170 aa22.59■■□□□ 1.21
PDLIM3-201ENST00000284767 KDM6AO15550 1401 aaPredicted RBP22.59■■□□□ 1.21
PDLIM3-201ENST00000284767 PHKG2P15735 406 aa22.59■■□□□ 1.21
PDLIM3-201ENST00000284767 CPDO75976 1380 aa22.58■■□□□ 1.21
PDLIM3-201ENST00000284767 SOS1Q07889 1333 aaPredicted RBP22.58■■□□□ 1.21
PDLIM3-201ENST00000284767 RPAP2Q8IXW5 612 aaPredicted RBP22.58■■□□□ 1.21
PDLIM3-201ENST00000284767 C16orf71Q8IYS4 520 aaPredicted RBP22.58■■□□□ 1.21
PDLIM3-201ENST00000284767 CYP27B1O15528 508 aa22.57■■□□□ 1.2
PDLIM3-201ENST00000284767 HSP90AB1P08238 724 aaKnown RBP22.57■■□□□ 1.2
PDLIM3-201ENST00000284767 SKOR2Q2VWA4 1001 aaPredicted RBP22.57■■□□□ 1.2
PDLIM3-201ENST00000284767 TNPO1Q92973 898 aaKnown RBP22.57■■□□□ 1.2
PDLIM3-201ENST00000284767 GIGYF1O75420 1035 aaPredicted RBP22.57■■□□□ 1.2
PDLIM3-201ENST00000284767 RAB3GAP1Q15042 981 aa22.57■■□□□ 1.2
PDLIM3-201ENST00000284767 PROSER3Q2NL68 480 aa22.57■■□□□ 1.2
PDLIM3-201ENST00000284767 NFATC2IPQ8NCF5 419 aa22.57■■□□□ 1.2
PDLIM3-201ENST00000284767 SMARCA5O60264 1052 aaPredicted RBP22.56■■□□□ 1.2
PDLIM3-201ENST00000284767 SPG7Q9UQ90 795 aa22.56■■□□□ 1.2
PDLIM3-201ENST00000284767 OTUD7AQ8TE49 926 aaPredicted RBP22.55■■□□□ 1.2
Retrieved 100 of 20,778 RNA–protein pairs in 7.4 ms