RNA–Protein interactions for RNA: ENST00000279249.2

CDC42EP2-201, Transcript of CDC42 effector protein 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDC42EP2, Length 2,023 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42EP2-201ENST00000279249 CDCA7Q9BWT1 371 aaPredicted RBP24.85■■□□□ 1.57
CDC42EP2-201ENST00000279249 KDM3BQ7LBC6 1761 aa24.84■■□□□ 1.57
CDC42EP2-201ENST00000279249 MBIPQ9NS73 344 aa24.83■■□□□ 1.57
CDC42EP2-201ENST00000279249 MRC1P22897 1456 aa24.83■■□□□ 1.57
CDC42EP2-201ENST00000279249 CHL1O00533 1208 aa24.82■■□□□ 1.56
CDC42EP2-201ENST00000279249 FAM98CQ17RN3 349 aaKnown RBP24.82■■□□□ 1.56
CDC42EP2-201ENST00000279249 DDX54Q8TDD1 881 aaKnown RBP24.82■■□□□ 1.56
CDC42EP2-201ENST00000279249 TRPC5Q9UL62 973 aaPredicted RBP24.81■■□□□ 1.56
CDC42EP2-201ENST00000279249 GJD4Q96KN9 370 aaPredicted RBP24.81■■□□□ 1.56
CDC42EP2-201ENST00000279249 NKX1-1Q15270 411 aaPredicted RBP24.8■■□□□ 1.56
CDC42EP2-201ENST00000279249 EXOC5O00471 708 aa24.79■■□□□ 1.56
CDC42EP2-201ENST00000279249 HSP90AB1P08238 724 aaKnown RBP24.79■■□□□ 1.56
CDC42EP2-201ENST00000279249 DCAF5Q96JK2 942 aa24.79■■□□□ 1.56
CDC42EP2-201ENST00000279249 MIS18AQ9NYP9 233 aa24.79■■□□□ 1.56
CDC42EP2-201ENST00000279249 ITGB4P16144 1822 aa24.78■■□□□ 1.56
CDC42EP2-201ENST00000279249 TCERG1O14776 1098 aaKnown RBP24.78■■□□□ 1.56
CDC42EP2-201ENST00000279249 PRKCSHP14314 528 aaPredicted RBP24.78■■□□□ 1.56
CDC42EP2-201ENST00000279249 EXOSC9Q06265 439 aaKnown RBP24.78■■□□□ 1.56
CDC42EP2-201ENST00000279249 TAF7Q15545 349 aaPredicted RBP24.78■■□□□ 1.56
CDC42EP2-201ENST00000279249 DDB1Q16531 1140 aa24.78■■□□□ 1.56
CDC42EP2-201ENST00000279249 TEFQ10587 303 aa24.76■■□□□ 1.55
CDC42EP2-201ENST00000279249 QTRT2Q9H974 415 aaKnown RBP24.76■■□□□ 1.55
CDC42EP2-201ENST00000279249 DOT1LQ8TEK3 1739 aa24.76■■□□□ 1.55
CDC42EP2-201ENST00000279249 TSPYL4Q9UJ04 414 aa24.76■■□□□ 1.55
CDC42EP2-201ENST00000279249 SLC52A2Q9HAB3 445 aa24.74■■□□□ 1.55
CDC42EP2-201ENST00000279249 BABAM1Q9NWV8 329 aa24.74■■□□□ 1.55
CDC42EP2-201ENST00000279249 RCAN3Q9UKA8 241 aa24.74■■□□□ 1.55
CDC42EP2-201ENST00000279249 MS4A1P11836 297 aa24.73■■□□□ 1.55
CDC42EP2-201ENST00000279249 PAPPAQ13219 1627 aa24.73■■□□□ 1.55
CDC42EP2-201ENST00000279249 MARCH10Q8NA82 808 aaPredicted RBP24.72■■□□□ 1.55
CDC42EP2-201ENST00000279249 KAT6BQ8WYB5 2073 aa24.71■■□□□ 1.55
CDC42EP2-201ENST00000279249 ONECUT3O60422 494 aaPredicted RBP24.71■■□□□ 1.55
CDC42EP2-201ENST00000279249 TSPYL6Q8N831 410 aa24.71■■□□□ 1.55
CDC42EP2-201ENST00000279249 NFATC2IPQ8NCF5 419 aa24.71■■□□□ 1.55
CDC42EP2-201ENST00000279249 BRWD3Q6RI45 1802 aa24.71■■□□□ 1.55
CDC42EP2-201ENST00000279249 KRT24Q2M2I5 525 aa24.71■■□□□ 1.55
CDC42EP2-201ENST00000279249 ZNF772Q68DY9 489 aaPredicted RBP24.71■■□□□ 1.55
CDC42EP2-201ENST00000279249 C8orf58Q8NAV2 365 aa24.71■■□□□ 1.55
CDC42EP2-201ENST00000279249 BTBD11A6QL63 1104 aa24.7■■□□□ 1.54
CDC42EP2-201ENST00000279249 ERVV-2B6SEH9 535 aa24.69■■□□□ 1.54
CDC42EP2-201ENST00000279249 KCNQ3O43525 872 aa24.69■■□□□ 1.54
CDC42EP2-201ENST00000279249 UBR2Q8IWV8 1755 aa24.68■■□□□ 1.54
CDC42EP2-201ENST00000279249 CABP4P57796 275 aa24.68■■□□□ 1.54
CDC42EP2-201ENST00000279249 A0A0G2JS52 829 aa24.68■■□□□ 1.54
CDC42EP2-201ENST00000279249 CT47B1P0C2W7 299 aaPredicted RBP24.67■■□□□ 1.54
CDC42EP2-201ENST00000279249 RGS17Q9UGC6 210 aaPredicted RBP24.66■■□□□ 1.54
CDC42EP2-201ENST00000279249 ELL2O00472 640 aaPredicted RBP24.66■■□□□ 1.54
CDC42EP2-201ENST00000279249 VAMP4O75379 141 aa24.66■■□□□ 1.54
CDC42EP2-201ENST00000279249 RRP1P56182 461 aaKnown RBP24.66■■□□□ 1.54
CDC42EP2-201ENST00000279249 TWISTNBQ3B726 338 aaPredicted RBP24.65■■□□□ 1.54
CDC42EP2-201ENST00000279249 SEPT12Q8IYM1 358 aa24.65■■□□□ 1.54
CDC42EP2-201ENST00000279249 RARSP54136 660 aaKnown RBP24.64■■□□□ 1.54
CDC42EP2-201ENST00000279249 EIF4A1P60842 406 aaKnown RBP24.64■■□□□ 1.54
CDC42EP2-201ENST00000279249 SLC39A6Q13433 755 aa24.64■■□□□ 1.54
CDC42EP2-201ENST00000279249 C5P01031 1676 aa24.64■■□□□ 1.53
CDC42EP2-201ENST00000279249 ZNF790Q6PG37 636 aa24.62■■□□□ 1.53
CDC42EP2-201ENST00000279249 SBF2Q86WG5 1849 aa24.62■■□□□ 1.53
CDC42EP2-201ENST00000279249 BCAR3O75815 825 aa24.62■■□□□ 1.53
CDC42EP2-201ENST00000279249 RBM6P78332 1123 aaKnown RBP24.62■■□□□ 1.53
CDC42EP2-201ENST00000279249 HEG1Q9ULI3 1381 aa24.61■■□□□ 1.53
CDC42EP2-201ENST00000279249 BCL9O00512 1426 aa24.61■■□□□ 1.53
CDC42EP2-201ENST00000279249 PIGBQ92521 554 aa24.61■■□□□ 1.53
CDC42EP2-201ENST00000279249 BACH2Q9BYV9 841 aa24.61■■□□□ 1.53
CDC42EP2-201ENST00000279249 TMOD3Q9NYL9 352 aa24.61■■□□□ 1.53
CDC42EP2-201ENST00000279249 KCPQ6ZWJ8 1503 aa24.6■■□□□ 1.53
CDC42EP2-201ENST00000279249 PDE4AP27815 886 aa24.59■■□□□ 1.53
CDC42EP2-201ENST00000279249 BCL2L13Q9BXK5 485 aa24.59■■□□□ 1.53
CDC42EP2-201ENST00000279249 SSH1Q8WYL5 1049 aa24.59■■□□□ 1.53
CDC42EP2-201ENST00000279249 NHSQ6T4R5 1651 aa24.58■■□□□ 1.53
CDC42EP2-201ENST00000279249 PRIM1P49642 420 aaKnown RBP24.58■■□□□ 1.53
CDC42EP2-201ENST00000279249 ILDR1Q86SU0 546 aaPredicted RBP24.58■■□□□ 1.53
CDC42EP2-201ENST00000279249 ZNF428Q96B54 188 aa24.57■■□□□ 1.52
CDC42EP2-201ENST00000279249 ACSBG1Q96GR2 724 aa24.57■■□□□ 1.52
CDC42EP2-201ENST00000279249 POTEAQ6S8J7 498 aa24.57■■□□□ 1.52
CDC42EP2-201ENST00000279249 LAMB4A4D0S4 1761 aa24.57■■□□□ 1.52
CDC42EP2-201ENST00000279249 CACNA1FO60840 1977 aa24.56■■□□□ 1.52
CDC42EP2-201ENST00000279249 FAM182BQ5T319 152 aa24.56■■□□□ 1.52
CDC42EP2-201ENST00000279249 ALDH1L2Q3SY69 923 aa24.56■■□□□ 1.52
CDC42EP2-201ENST00000279249 DDRGK1Q96HY6 314 aa24.56■■□□□ 1.52
CDC42EP2-201ENST00000279249 ZNF496Q96IT1 587 aaPredicted RBP24.56■■□□□ 1.52
CDC42EP2-201ENST00000279249 SOS1Q07889 1333 aaPredicted RBP24.55■■□□□ 1.52
CDC42EP2-201ENST00000279249 TTC5Q8N0Z6 440 aa24.55■■□□□ 1.52
CDC42EP2-201ENST00000279249 SYTL4Q96C24 671 aaPredicted RBP24.55■■□□□ 1.52
CDC42EP2-201ENST00000279249 PLIN1O60240 522 aa24.54■■□□□ 1.52
CDC42EP2-201ENST00000279249 SMC4Q9NTJ3 1288 aa24.54■■□□□ 1.52
CDC42EP2-201ENST00000279249 PRAMEF22A3QJZ6 481 aa24.54■■□□□ 1.52
CDC42EP2-201ENST00000279249 GIGYF1O75420 1035 aaPredicted RBP24.54■■□□□ 1.52
CDC42EP2-201ENST00000279249 RXRBP28702 533 aa24.54■■□□□ 1.52
CDC42EP2-201ENST00000279249 ASAP1Q9ULH1 1129 aa24.54■■□□□ 1.52
CDC42EP2-201ENST00000279249 BTAF1O14981 1849 aa24.54■■□□□ 1.52
CDC42EP2-201ENST00000279249 RGS12O14924 1447 aa24.53■■□□□ 1.52
CDC42EP2-201ENST00000279249 HOXB7P09629 217 aa24.53■■□□□ 1.52
CDC42EP2-201ENST00000279249 ATG3Q9NT62 314 aa24.53■■□□□ 1.52
CDC42EP2-201ENST00000279249 KCNQ2O43526 872 aa24.52■■□□□ 1.52
CDC42EP2-201ENST00000279249 MRPL50Q8N5N7 158 aaKnown RBP24.52■■□□□ 1.52
CDC42EP2-201ENST00000279249 ANO8Q9HCE9 1232 aaPredicted RBP24.52■■□□□ 1.52
CDC42EP2-201ENST00000279249 EXOC6Q8TAG9 804 aa24.51■■□□□ 1.51
CDC42EP2-201ENST00000279249 FMNL2Q96PY5 1086 aa24.51■■□□□ 1.51
CDC42EP2-201ENST00000279249 BRPF1P55201 1214 aaPredicted RBP24.5■■□□□ 1.51
CDC42EP2-201ENST00000279249 KRT27Q7Z3Y8 459 aa24.5■■□□□ 1.51
Retrieved 100 of 20,778 RNA–protein pairs in 78.4 ms