RNA–Protein interactions for RNA: ENST00000279027.8

SLC13A3-201, Transcript of solute carrier family 13 member 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SLC13A3, Length 4,017 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC13A3-201ENST00000279027 PREX1Q8TCU6 1659 aa14.48□□□□□ -0.09
SLC13A3-201ENST00000279027 PRPF40AO75400 957 aaKnown RBP14.48□□□□□ -0.09
SLC13A3-201ENST00000279027 IFIT2P09913 472 aaKnown RBP14.48□□□□□ -0.09
SLC13A3-201ENST00000279027 PDE1AP54750 535 aa14.48□□□□□ -0.09
SLC13A3-201ENST00000279027 CAVIN1Q6NZI2 390 aaKnown RBP14.47□□□□□ -0.09
SLC13A3-201ENST00000279027 DIAPH3Q9NSV4 1193 aa14.47□□□□□ -0.09
SLC13A3-201ENST00000279027 TMEM131LA2VDJ0 1609 aa14.47□□□□□ -0.09
SLC13A3-201ENST00000279027 ATF3P18847 181 aa14.47□□□□□ -0.09
SLC13A3-201ENST00000279027 CWC27Q6UX04 472 aaKnown RBP14.47□□□□□ -0.09
SLC13A3-201ENST00000279027 AATKQ6ZMQ8 1374 aa14.47□□□□□ -0.09
SLC13A3-201ENST00000279027 MYO3AQ8NEV4 1616 aa14.46□□□□□ -0.09
SLC13A3-201ENST00000279027 USP6P35125 1406 aa14.46□□□□□ -0.1
SLC13A3-201ENST00000279027 FGD1P98174 961 aa14.46□□□□□ -0.1
SLC13A3-201ENST00000279027 TTC5Q8N0Z6 440 aa14.45□□□□□ -0.1
SLC13A3-201ENST00000279027 ANO8Q9HCE9 1232 aaPredicted RBP14.45□□□□□ -0.1
SLC13A3-201ENST00000279027 CPSF1Q10570 1443 aaKnown RBP14.45□□□□□ -0.1
SLC13A3-201ENST00000279027 PIK3R4Q99570 1358 aa14.45□□□□□ -0.1
SLC13A3-201ENST00000279027 ZGPATQ8N5A5 531 aaKnown RBP14.45□□□□□ -0.1
SLC13A3-201ENST00000279027 CHAMP1Q96JM3 812 aa14.45□□□□□ -0.1
SLC13A3-201ENST00000279027 SBNO1A3KN83 1393 aa14.45□□□□□ -0.1
SLC13A3-201ENST00000279027 ANKRD24Q8TF21 1146 aa14.44□□□□□ -0.1
SLC13A3-201ENST00000279027 DNAAF4Q8WXU2 420 aa14.44□□□□□ -0.1
SLC13A3-201ENST00000279027 SIRT1Q96EB6 747 aa14.44□□□□□ -0.1
SLC13A3-201ENST00000279027 ANTXR1Q9H6X2 564 aa14.44□□□□□ -0.1
SLC13A3-201ENST00000279027 PA2G4Q9UQ80 394 aaKnown RBP14.44□□□□□ -0.1
SLC13A3-201ENST00000279027 G3BP1Q13283 466 aaKnown RBP eCLIP14.44□□□□□ -0.1
SLC13A3-201ENST00000279027 KRT28Q7Z3Y7 464 aa14.44□□□□□ -0.1
SLC13A3-201ENST00000279027 NEURL4Q96JN8 1562 aa14.44□□□□□ -0.1
SLC13A3-201ENST00000279027 SHPRHQ149N8 1683 aa14.44□□□□□ -0.1
SLC13A3-201ENST00000279027 RBM25P49756 843 aaKnown RBP14.44□□□□□ -0.1
SLC13A3-201ENST00000279027 CLASRPQ8N2M8 674 aaKnown RBP14.44□□□□□ -0.1
SLC13A3-201ENST00000279027 SPG7Q9UQ90 795 aa14.44□□□□□ -0.1
SLC13A3-201ENST00000279027 RTL1A6NKG5 1358 aa14.43□□□□□ -0.1
SLC13A3-201ENST00000279027 COL3A1P02461 1466 aaPredicted RBP14.43□□□□□ -0.1
SLC13A3-201ENST00000279027 PTMAP06454 111 aaKnown RBP14.43□□□□□ -0.1
SLC13A3-201ENST00000279027 CWF19L2Q2TBE0 894 aaKnown RBP14.43□□□□□ -0.1
SLC13A3-201ENST00000279027 RIMBP3CA6NJZ7 1639 aa14.43□□□□□ -0.1
SLC13A3-201ENST00000279027 RIMBP3BA6NNM3 1639 aa14.43□□□□□ -0.1
SLC13A3-201ENST00000279027 RIMBP3Q9UFD9 1639 aa14.43□□□□□ -0.1
SLC13A3-201ENST00000279027 GCP02774 474 aa14.43□□□□□ -0.1
SLC13A3-201ENST00000279027 RNF214Q8ND24 703 aa14.43□□□□□ -0.1
SLC13A3-201ENST00000279027 MAP3K2Q9Y2U5 619 aa14.43□□□□□ -0.1
SLC13A3-201ENST00000279027 IFT172Q9UG01 1749 aa14.43□□□□□ -0.1
SLC13A3-201ENST00000279027 NBPF7P0C2Y1 421 aaPredicted RBP14.43□□□□□ -0.1
SLC13A3-201ENST00000279027 NEXNQ0ZGT2 675 aa14.43□□□□□ -0.1
SLC13A3-201ENST00000279027 USP26Q9BXU7 913 aa14.42□□□□□ -0.1
SLC13A3-201ENST00000279027 CCDC8Q9H0W5 538 aaPredicted RBP14.42□□□□□ -0.1
SLC13A3-201ENST00000279027 CDK12Q9NYV4 1490 aaPredicted RBP14.42□□□□□ -0.1
SLC13A3-201ENST00000279027 NLRP1Q9C000 1473 aa14.42□□□□□ -0.1
SLC13A3-201ENST00000279027 NUCB2P80303 420 aa14.42□□□□□ -0.1
SLC13A3-201ENST00000279027 KCNH5Q8NCM2 988 aa14.42□□□□□ -0.1
SLC13A3-201ENST00000279027 ATP8B2P98198 1209 aa14.41□□□□□ -0.1
SLC13A3-201ENST00000279027 GPATCH3Q96I76 525 aa14.41□□□□□ -0.1
SLC13A3-201ENST00000279027 PLEKHG1Q9ULL1 1385 aa14.41□□□□□ -0.1
SLC13A3-201ENST00000279027 AACSQ86V21 672 aa14.41□□□□□ -0.1
SLC13A3-201ENST00000279027 MAP3K5Q99683 1374 aa14.41□□□□□ -0.1
SLC13A3-201ENST00000279027 PRAMEF22A3QJZ6 481 aa14.41□□□□□ -0.1
SLC13A3-201ENST00000279027 XRCC6P12956 609 aaKnown RBP eCLIP14.41□□□□□ -0.1
SLC13A3-201ENST00000279027 MPNDQ8N594 471 aa14.41□□□□□ -0.1
SLC13A3-201ENST00000279027 GDPD2Q9HCC8 539 aa14.41□□□□□ -0.1
SLC13A3-201ENST00000279027 STRN4Q9NRL3 753 aa14.41□□□□□ -0.1
SLC13A3-201ENST00000279027 RICTORQ6R327 1708 aa14.4□□□□□ -0.1
SLC13A3-201ENST00000279027 DDX58O95786 925 aaKnown RBP14.4□□□□□ -0.1
SLC13A3-201ENST00000279027 BRPF1P55201 1214 aaPredicted RBP14.4□□□□□ -0.1
SLC13A3-201ENST00000279027 GRPEL1Q9HAV7 217 aa14.4□□□□□ -0.1
SLC13A3-201ENST00000279027 MAP2P11137 1827 aaKnown RBP14.4□□□□□ -0.1
SLC13A3-201ENST00000279027 PKP1Q13835 747 aa14.4□□□□□ -0.1
SLC13A3-201ENST00000279027 IP6K1Q92551 441 aa14.4□□□□□ -0.1
SLC13A3-201ENST00000279027 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP14.39□□□□□ -0.11
SLC13A3-201ENST00000279027 CNTROBQ8N137 903 aa14.39□□□□□ -0.11
SLC13A3-201ENST00000279027 SKOR2Q2VWA4 1001 aaPredicted RBP14.39□□□□□ -0.11
SLC13A3-201ENST00000279027 RHPN1Q8TCX5 695 aa14.39□□□□□ -0.11
SLC13A3-201ENST00000279027 SNX21Q969T3 373 aa14.39□□□□□ -0.11
SLC13A3-201ENST00000279027 CCDC85AQ96PX6 553 aaPredicted RBP14.39□□□□□ -0.11
SLC13A3-201ENST00000279027 MED14O60244 1454 aa14.39□□□□□ -0.11
SLC13A3-201ENST00000279027 TATP17735 454 aaPredicted RBP14.39□□□□□ -0.11
SLC13A3-201ENST00000279027 FOSBP53539 338 aa14.39□□□□□ -0.11
SLC13A3-201ENST00000279027 USP44Q9H0E7 712 aa14.39□□□□□ -0.11
SLC13A3-201ENST00000279027 ATP5J2-PTCD1G3V325 749 aa14.38□□□□□ -0.11
SLC13A3-201ENST00000279027 PTCD1O75127 700 aaKnown RBP14.38□□□□□ -0.11
SLC13A3-201ENST00000279027 NEUROD6Q96NK8 337 aa14.38□□□□□ -0.11
SLC13A3-201ENST00000279027 BAG4O95429 457 aaKnown RBP14.38□□□□□ -0.11
SLC13A3-201ENST00000279027 MRE11P49959 708 aa14.38□□□□□ -0.11
SLC13A3-201ENST00000279027 CHMP4AQ9BY43 222 aa14.38□□□□□ -0.11
SLC13A3-201ENST00000279027 BOLA2Q9H3K6 86 aa14.38□□□□□ -0.11
SLC13A3-201ENST00000279027 RBM27Q9P2N5 1060 aaKnown RBP14.38□□□□□ -0.11
SLC13A3-201ENST00000279027 ADAMTS13Q76LX8 1427 aa14.38□□□□□ -0.11
SLC13A3-201ENST00000279027 IGSF1Q8N6C5 1336 aa14.38□□□□□ -0.11
SLC13A3-201ENST00000279027 VPS37CA5D8V6 355 aaPredicted RBP14.38□□□□□ -0.11
SLC13A3-201ENST00000279027 UNC5CLQ8IV45 518 aa14.38□□□□□ -0.11
SLC13A3-201ENST00000279027 KLHDC4Q8TBB5 520 aa14.38□□□□□ -0.11
SLC13A3-201ENST00000279027 CIZ1Q9ULV3 898 aaPredicted RBP14.38□□□□□ -0.11
SLC13A3-201ENST00000279027 CPA1P15085 419 aa14.37□□□□□ -0.11
SLC13A3-201ENST00000279027 DNAJC2Q99543 621 aaKnown RBP14.37□□□□□ -0.11
SLC13A3-201ENST00000279027 MYD88Q99836 296 aa14.37□□□□□ -0.11
SLC13A3-201ENST00000279027 FSD1Q9BTV5 496 aa14.37□□□□□ -0.11
SLC13A3-201ENST00000279027 DIP2BQ9P265 1576 aa14.37□□□□□ -0.11
SLC13A3-201ENST00000279027 KIF1BPQ96EK5 621 aa14.37□□□□□ -0.11
SLC13A3-201ENST00000279027 ESYT1Q9BSJ8 1104 aa14.37□□□□□ -0.11
SLC13A3-201ENST00000279027 DBF4Q9UBU7 674 aaPredicted RBP14.37□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 12.9 ms