RNA–Protein interactions for RNA: ENST00000277480.6

LCN2-201, Transcript of lipocalin 2, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene LCN2, Length 822 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LCN2-201ENST00000277480 BABAM1Q9NWV8 329 aa13.14□□□□□ -0.31
LCN2-201ENST00000277480 SCN11AQ9UI33 1791 aa13.14□□□□□ -0.31
LCN2-201ENST00000277480 RNF123Q5XPI4 1314 aa13.13□□□□□ -0.31
LCN2-201ENST00000277480 SIPA1L3O60292 1781 aaPredicted RBP13.13□□□□□ -0.31
LCN2-201ENST00000277480 NFATC2IPQ8NCF5 419 aa13.13□□□□□ -0.31
LCN2-201ENST00000277480 BTBD11A6QL63 1104 aa13.12□□□□□ -0.31
LCN2-201ENST00000277480 ONECUT3O60422 494 aaPredicted RBP13.12□□□□□ -0.31
LCN2-201ENST00000277480 RGS17Q9UGC6 210 aaPredicted RBP13.12□□□□□ -0.31
LCN2-201ENST00000277480 KDM3BQ7LBC6 1761 aa13.12□□□□□ -0.31
LCN2-201ENST00000277480 VIRMAQ69YN4 1812 aaKnown RBP13.11□□□□□ -0.31
LCN2-201ENST00000277480 ERVV-2B6SEH9 535 aa13.11□□□□□ -0.31
LCN2-201ENST00000277480 ELL2O00472 640 aaPredicted RBP13.11□□□□□ -0.31
LCN2-201ENST00000277480 VAMP4O75379 141 aa13.11□□□□□ -0.31
LCN2-201ENST00000277480 BCAR3O75815 825 aa13.11□□□□□ -0.31
LCN2-201ENST00000277480 RARSP54136 660 aaKnown RBP13.11□□□□□ -0.31
LCN2-201ENST00000277480 CABP4P57796 275 aa13.11□□□□□ -0.31
LCN2-201ENST00000277480 SLC39A6Q13433 755 aa13.11□□□□□ -0.31
LCN2-201ENST00000277480 CT47B1P0C2W7 299 aaPredicted RBP13.1□□□□□ -0.31
LCN2-201ENST00000277480 EIF4A1P60842 406 aaKnown RBP13.1□□□□□ -0.31
LCN2-201ENST00000277480 TWISTNBQ3B726 338 aaPredicted RBP13.1□□□□□ -0.31
LCN2-201ENST00000277480 RRP1P56182 461 aaKnown RBP13.09□□□□□ -0.31
LCN2-201ENST00000277480 ZNF772Q68DY9 489 aaPredicted RBP13.09□□□□□ -0.31
LCN2-201ENST00000277480 SEPT12Q8IYM1 358 aa13.09□□□□□ -0.31
LCN2-201ENST00000277480 SSH1Q8WYL5 1049 aa13.09□□□□□ -0.31
LCN2-201ENST00000277480 HEG1Q9ULI3 1381 aa13.08□□□□□ -0.31
LCN2-201ENST00000277480 A0A0G2JS52 829 aa13.08□□□□□ -0.32
LCN2-201ENST00000277480 MYT1Q01538 1121 aa13.08□□□□□ -0.32
LCN2-201ENST00000277480 PIGBQ92521 554 aa13.08□□□□□ -0.32
LCN2-201ENST00000277480 BCL2L13Q9BXK5 485 aa13.08□□□□□ -0.32
LCN2-201ENST00000277480 TCERG1O14776 1098 aaKnown RBP13.07□□□□□ -0.32
LCN2-201ENST00000277480 PLIN1O60240 522 aa13.07□□□□□ -0.32
LCN2-201ENST00000277480 ZNF790Q6PG37 636 aa13.07□□□□□ -0.32
LCN2-201ENST00000277480 ACSBG1Q96GR2 724 aa13.07□□□□□ -0.32
LCN2-201ENST00000277480 PAPPAQ13219 1627 aa13.06□□□□□ -0.32
LCN2-201ENST00000277480 BCL9O00512 1426 aa13.06□□□□□ -0.32
LCN2-201ENST00000277480 DOT1LQ8TEK3 1739 aa13.06□□□□□ -0.32
LCN2-201ENST00000277480 PRAMEF22A3QJZ6 481 aa13.06□□□□□ -0.32
LCN2-201ENST00000277480 PRIM1P49642 420 aaKnown RBP13.06□□□□□ -0.32
LCN2-201ENST00000277480 RBM6P78332 1123 aaKnown RBP13.06□□□□□ -0.32
LCN2-201ENST00000277480 IRX6P78412 446 aaPredicted RBP13.06□□□□□ -0.32
LCN2-201ENST00000277480 FAM182BQ5T319 152 aa13.06□□□□□ -0.32
LCN2-201ENST00000277480 POTEAQ6S8J7 498 aa13.06□□□□□ -0.32
LCN2-201ENST00000277480 TMOD3Q9NYL9 352 aa13.06□□□□□ -0.32
LCN2-201ENST00000277480 KCPQ6ZWJ8 1503 aa13.05□□□□□ -0.32
LCN2-201ENST00000277480 ALDH1L2Q3SY69 923 aa13.05□□□□□ -0.32
LCN2-201ENST00000277480 MRPL50Q8N5N7 158 aaKnown RBP13.05□□□□□ -0.32
LCN2-201ENST00000277480 ZNF496Q96IT1 587 aaPredicted RBP13.05□□□□□ -0.32
LCN2-201ENST00000277480 SMC4Q9NTJ3 1288 aa13.05□□□□□ -0.32
LCN2-201ENST00000277480 KCNQ2O43526 872 aa13.04□□□□□ -0.32
LCN2-201ENST00000277480 GIGYF1O75420 1035 aaPredicted RBP13.04□□□□□ -0.32
LCN2-201ENST00000277480 C20orf194Q5TEA3 1177 aa13.04□□□□□ -0.32
LCN2-201ENST00000277480 ZNF428Q96B54 188 aa13.04□□□□□ -0.32
LCN2-201ENST00000277480 ATG3Q9NT62 314 aa13.04□□□□□ -0.32
LCN2-201ENST00000277480 ASAP1Q9ULH1 1129 aa13.04□□□□□ -0.32
LCN2-201ENST00000277480 TNNQ9UQP3 1299 aa13.04□□□□□ -0.32
LCN2-201ENST00000277480 BRPF1P55201 1214 aaPredicted RBP13.03□□□□□ -0.32
LCN2-201ENST00000277480 PTF1AQ7RTS3 328 aa13.03□□□□□ -0.32
LCN2-201ENST00000277480 NECTIN2Q92692 538 aa13.03□□□□□ -0.32
LCN2-201ENST00000277480 ITGB4P16144 1822 aa13.03□□□□□ -0.32
LCN2-201ENST00000277480 HOXB7P09629 217 aa13.02□□□□□ -0.33
LCN2-201ENST00000277480 TTC5Q8N0Z6 440 aa13.02□□□□□ -0.33
LCN2-201ENST00000277480 SYTL4Q96C24 671 aaPredicted RBP13.02□□□□□ -0.33
LCN2-201ENST00000277480 GTF3C3Q9Y5Q9 886 aa13.02□□□□□ -0.33
LCN2-201ENST00000277480 SOS1Q07889 1333 aaPredicted RBP13.02□□□□□ -0.33
LCN2-201ENST00000277480 UBR2Q8IWV8 1755 aa13.02□□□□□ -0.33
LCN2-201ENST00000277480 RXRBP28702 533 aa13.01□□□□□ -0.33
LCN2-201ENST00000277480 FMNL2Q96PY5 1086 aa13.01□□□□□ -0.33
LCN2-201ENST00000277480 SLC4A9Q96Q91 983 aa13.01□□□□□ -0.33
LCN2-201ENST00000277480 NOB1Q9ULX3 412 aaKnown RBP13.01□□□□□ -0.33
LCN2-201ENST00000277480 RGS12O14924 1447 aa13.01□□□□□ -0.33
LCN2-201ENST00000277480 C5P01031 1676 aa13.01□□□□□ -0.33
LCN2-201ENST00000277480 PTCD1O75127 700 aaKnown RBP13□□□□□ -0.33
LCN2-201ENST00000277480 EIF2S2P20042 333 aaKnown RBP13□□□□□ -0.33
LCN2-201ENST00000277480 FKBP8Q14318 412 aa13□□□□□ -0.33
LCN2-201ENST00000277480 HDGFL1Q5TGJ6 251 aa13□□□□□ -0.33
LCN2-201ENST00000277480 G2E3Q7L622 706 aa13□□□□□ -0.33
LCN2-201ENST00000277480 KRT27Q7Z3Y8 459 aa13□□□□□ -0.33
LCN2-201ENST00000277480 FRAT1Q92837 279 aaPredicted RBP13□□□□□ -0.33
LCN2-201ENST00000277480 BRWD3Q6RI45 1802 aa12.99□□□□□ -0.33
LCN2-201ENST00000277480 SNRPA1P09661 255 aaKnown RBP12.99□□□□□ -0.33
LCN2-201ENST00000277480 CCDC30Q5VVM6 783 aa12.99□□□□□ -0.33
LCN2-201ENST00000277480 USP16Q9Y5T5 823 aa12.99□□□□□ -0.33
LCN2-201ENST00000277480 ANXA1P04083 346 aa12.98□□□□□ -0.33
LCN2-201ENST00000277480 SLC4A2P04920 1241 aa12.98□□□□□ -0.33
LCN2-201ENST00000277480 RLBP1P12271 317 aa12.98□□□□□ -0.33
LCN2-201ENST00000277480 TRIM27P14373 513 aa12.98□□□□□ -0.33
LCN2-201ENST00000277480 PDIA6Q15084 440 aa12.98□□□□□ -0.33
LCN2-201ENST00000277480 PROSER3Q2NL68 480 aa12.98□□□□□ -0.33
LCN2-201ENST00000277480 GOLGA6L2Q8N9W4 650 aaPredicted RBP12.98□□□□□ -0.33
LCN2-201ENST00000277480 PANK1Q8TE04 598 aa12.98□□□□□ -0.33
LCN2-201ENST00000277480 CHPF2Q9P2E5 772 aa12.98□□□□□ -0.33
LCN2-201ENST00000277480 NHSQ6T4R5 1651 aa12.98□□□□□ -0.33
LCN2-201ENST00000277480 KIF16BQ96L93 1317 aa12.97□□□□□ -0.33
LCN2-201ENST00000277480 NEFLP07196 543 aa12.97□□□□□ -0.33
LCN2-201ENST00000277480 ZKSCAN2Q63HK3 967 aa12.97□□□□□ -0.33
LCN2-201ENST00000277480 CRBNQ96SW2 442 aa12.97□□□□□ -0.33
LCN2-201ENST00000277480 RBM42Q9BTD8 480 aaKnown RBP12.97□□□□□ -0.33
LCN2-201ENST00000277480 CANXP27824 592 aaKnown RBP12.96□□□□□ -0.33
LCN2-201ENST00000277480 ATF7IPQ6VMQ6 1270 aa12.96□□□□□ -0.33
LCN2-201ENST00000277480 LRP10Q7Z4F1 713 aa12.96□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms