RNA–Protein interactions for RNA: ENST00000274990.4

CRIP3-201, Transcript of cysteine rich protein 3, humanhuman

TSL 1 (best) BASIC

Gene CRIP3, Length 800 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CRIP3-201ENST00000274990 AKAP4Q5JQC9 854 aa12.54□□□□□ -0.4
CRIP3-201ENST00000274990 SLC27A3Q5K4L6 730 aa12.54□□□□□ -0.4
CRIP3-201ENST00000274990 TFCP2L1Q9NZI6 479 aa12.54□□□□□ -0.4
CRIP3-201ENST00000274990 LRP5O75197 1615 aa12.54□□□□□ -0.4
CRIP3-201ENST00000274990 ZNF316A6NFI3 1004 aaPredicted RBP12.53□□□□□ -0.4
CRIP3-201ENST00000274990 ERVV-2B6SEH9 535 aa12.53□□□□□ -0.4
CRIP3-201ENST00000274990 MSH5O43196 834 aa12.53□□□□□ -0.4
CRIP3-201ENST00000274990 PHF14O94880 888 aa12.53□□□□□ -0.4
CRIP3-201ENST00000274990 HSP90AB1P08238 724 aaKnown RBP12.53□□□□□ -0.4
CRIP3-201ENST00000274990 ATP6V1AP38606 617 aa12.53□□□□□ -0.4
CRIP3-201ENST00000274990 DCTN1Q14203 1278 aa12.53□□□□□ -0.4
CRIP3-201ENST00000274990 IL17REQ8NFR9 667 aa12.53□□□□□ -0.4
CRIP3-201ENST00000274990 NUDCQ9Y266 331 aa12.53□□□□□ -0.4
CRIP3-201ENST00000274990 C4BP0C0L5 1744 aa12.52□□□□□ -0.41
CRIP3-201ENST00000274990 SENP3-EIF4A1A0A087X0R7 540 aa12.52□□□□□ -0.41
CRIP3-201ENST00000274990 MSL1Q68DK7 614 aa12.52□□□□□ -0.41
CRIP3-201ENST00000274990 COL23A1Q86Y22 540 aaPredicted RBP12.52□□□□□ -0.41
CRIP3-201ENST00000274990 RALBP1Q15311 655 aa12.51□□□□□ -0.41
CRIP3-201ENST00000274990 CCDC184Q52MB2 194 aa12.51□□□□□ -0.41
CRIP3-201ENST00000274990 MCM10Q7L590 875 aa12.51□□□□□ -0.41
CRIP3-201ENST00000274990 SMARCC1Q92922 1105 aaPredicted RBP12.51□□□□□ -0.41
CRIP3-201ENST00000274990 SLC52A2Q9HAB3 445 aa12.51□□□□□ -0.41
CRIP3-201ENST00000274990 KCNQ3O43525 872 aa12.5□□□□□ -0.41
CRIP3-201ENST00000274990 PTGER2P43116 358 aa12.5□□□□□ -0.41
CRIP3-201ENST00000274990 CCDC146Q8IYE0 955 aa12.5□□□□□ -0.41
CRIP3-201ENST00000274990 PRKRIP1Q9H875 184 aaPredicted RBP12.5□□□□□ -0.41
CRIP3-201ENST00000274990 SPON1Q9HCB6 807 aa12.5□□□□□ -0.41
CRIP3-201ENST00000274990 MYBBP1AQ9BQG0 1328 aaKnown RBP12.5□□□□□ -0.41
CRIP3-201ENST00000274990 MAP3K5Q99683 1374 aa12.5□□□□□ -0.41
CRIP3-201ENST00000274990 DLG5Q8TDM6 1919 aa12.5□□□□□ -0.41
CRIP3-201ENST00000274990 UBR3Q6ZT12 1888 aa12.49□□□□□ -0.41
CRIP3-201ENST00000274990 ADAMTS7Q9UKP4 1686 aa12.49□□□□□ -0.41
CRIP3-201ENST00000274990 GNAT3A8MTJ3 354 aa12.49□□□□□ -0.41
CRIP3-201ENST00000274990 GAS2L2Q8NHY3 880 aa12.49□□□□□ -0.41
CRIP3-201ENST00000274990 AK7Q96M32 723 aa12.49□□□□□ -0.41
CRIP3-201ENST00000274990 THUMPD2Q9BTF0 503 aaKnown RBP12.49□□□□□ -0.41
CRIP3-201ENST00000274990 MYH14Q7Z406 1995 aaKnown RBP12.49□□□□□ -0.41
CRIP3-201ENST00000274990 TJP1Q07157 1748 aa12.48□□□□□ -0.41
CRIP3-201ENST00000274990 PLEKHG2Q9H7P9 1386 aa12.48□□□□□ -0.41
CRIP3-201ENST00000274990 GNPATO15228 680 aa12.48□□□□□ -0.41
CRIP3-201ENST00000274990 FCHSD2O94868 740 aa12.48□□□□□ -0.41
CRIP3-201ENST00000274990 PLEKHF1Q96S99 279 aa12.48□□□□□ -0.41
CRIP3-201ENST00000274990 PPP1R1BQ9UD71 204 aaPredicted RBP12.48□□□□□ -0.41
CRIP3-201ENST00000274990 QSER1Q2KHR3 1735 aa12.48□□□□□ -0.41
CRIP3-201ENST00000274990 MRC1P22897 1456 aa12.47□□□□□ -0.41
CRIP3-201ENST00000274990 DNAJC10Q8IXB1 793 aa12.47□□□□□ -0.41
CRIP3-201ENST00000274990 KLHL34Q8N239 644 aa12.47□□□□□ -0.41
CRIP3-201ENST00000274990 MIS18AQ9NYP9 233 aa12.47□□□□□ -0.41
CRIP3-201ENST00000274990 RRP7AQ9Y3A4 280 aaKnown RBP12.47□□□□□ -0.41
CRIP3-201ENST00000274990 SIPA1L3O60292 1781 aaPredicted RBP12.47□□□□□ -0.41
CRIP3-201ENST00000274990 COL5A3P25940 1745 aaPredicted RBP12.47□□□□□ -0.41
CRIP3-201ENST00000274990 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP12.46□□□□□ -0.41
CRIP3-201ENST00000274990 SGIP1Q9BQI5 828 aa12.46□□□□□ -0.41
CRIP3-201ENST00000274990 MTFR1LQ9H019 292 aa12.46□□□□□ -0.41
CRIP3-201ENST00000274990 KCPQ6ZWJ8 1503 aa12.46□□□□□ -0.42
CRIP3-201ENST00000274990 PRAMEF22A3QJZ6 481 aa12.45□□□□□ -0.42
CRIP3-201ENST00000274990 TEFQ10587 303 aa12.45□□□□□ -0.42
CRIP3-201ENST00000274990 NEUROD2Q15784 382 aa12.44□□□□□ -0.42
CRIP3-201ENST00000274990 CRKLP46109 303 aaKnown RBP12.43□□□□□ -0.42
CRIP3-201ENST00000274990 PIP4K2AP48426 406 aaPredicted RBP12.43□□□□□ -0.42
CRIP3-201ENST00000274990 RTF1Q92541 710 aaKnown RBP12.43□□□□□ -0.42
CRIP3-201ENST00000274990 ZNF496Q96IT1 587 aaPredicted RBP12.43□□□□□ -0.42
CRIP3-201ENST00000274990 FHDC1Q9C0D6 1143 aaPredicted RBP12.43□□□□□ -0.42
CRIP3-201ENST00000274990 ADAMTS8Q9UP79 889 aa12.43□□□□□ -0.42
CRIP3-201ENST00000274990 UBR2Q8IWV8 1755 aa12.43□□□□□ -0.42
CRIP3-201ENST00000274990 CEMIPQ8WUJ3 1361 aa12.43□□□□□ -0.42
CRIP3-201ENST00000274990 BTBD11A6QL63 1104 aa12.42□□□□□ -0.42
CRIP3-201ENST00000274990 NFE2L2Q16236 605 aa12.42□□□□□ -0.42
CRIP3-201ENST00000274990 INTS5Q6P9B9 1019 aaKnown RBP12.42□□□□□ -0.42
CRIP3-201ENST00000274990 SRP68Q9UHB9 627 aaKnown RBP12.42□□□□□ -0.42
CRIP3-201ENST00000274990 MAPK8IP3Q9UPT6 1336 aa12.41□□□□□ -0.42
CRIP3-201ENST00000274990 C4AP0C0L4 1744 aa12.41□□□□□ -0.42
CRIP3-201ENST00000274990 WDR43Q15061 677 aaKnown RBP eCLIP12.41□□□□□ -0.42
CRIP3-201ENST00000274990 ZNF790Q6PG37 636 aa12.41□□□□□ -0.42
CRIP3-201ENST00000274990 TTC5Q8N0Z6 440 aa12.41□□□□□ -0.42
CRIP3-201ENST00000274990 ARHGEF1Q92888 912 aaKnown RBP12.41□□□□□ -0.42
CRIP3-201ENST00000274990 ARXQ96QS3 562 aa12.41□□□□□ -0.42
CRIP3-201ENST00000274990 WWC3Q9ULE0 1092 aa12.41□□□□□ -0.42
CRIP3-201ENST00000274990 ZBTB1Q9Y2K1 713 aa12.41□□□□□ -0.42
CRIP3-201ENST00000274990 RTCBQ9Y3I0 505 aaKnown RBP12.41□□□□□ -0.42
CRIP3-201ENST00000274990 CYP19A1P11511 503 aaPredicted RBP12.4□□□□□ -0.42
CRIP3-201ENST00000274990 CANXP27824 592 aaKnown RBP12.4□□□□□ -0.42
CRIP3-201ENST00000274990 RIPK4P57078 832 aa12.4□□□□□ -0.42
CRIP3-201ENST00000274990 ZNF831Q5JPB2 1677 aa12.4□□□□□ -0.42
CRIP3-201ENST00000274990 COL24A1Q17RW2 1714 aa12.4□□□□□ -0.43
CRIP3-201ENST00000274990 CNTNAP4Q9C0A0 1308 aa12.39□□□□□ -0.43
CRIP3-201ENST00000274990 RPS6KA4O75676 772 aa12.39□□□□□ -0.43
CRIP3-201ENST00000274990 NEFMP07197 916 aa12.39□□□□□ -0.43
CRIP3-201ENST00000274990 SSFA2P28290 1259 aa12.39□□□□□ -0.43
CRIP3-201ENST00000274990 TMPOP42166 694 aaKnown RBP12.39□□□□□ -0.43
CRIP3-201ENST00000274990 TRAPPC3LQ5T215 181 aa12.39□□□□□ -0.43
CRIP3-201ENST00000274990 NLGN2Q8NFZ4 835 aa12.39□□□□□ -0.43
CRIP3-201ENST00000274990 SYT17Q9BSW7 474 aa12.39□□□□□ -0.43
CRIP3-201ENST00000274990 ZNF330Q9Y3S2 320 aaPredicted RBP12.39□□□□□ -0.43
CRIP3-201ENST00000274990 A1BGP04217 495 aa12.38□□□□□ -0.43
CRIP3-201ENST00000274990 POLD1P28340 1107 aa12.38□□□□□ -0.43
CRIP3-201ENST00000274990 SLC16A10Q8TF71 515 aa12.38□□□□□ -0.43
CRIP3-201ENST00000274990 CCDC87Q9NVE4 849 aa12.38□□□□□ -0.43
CRIP3-201ENST00000274990 USP16Q9Y5T5 823 aa12.38□□□□□ -0.43
CRIP3-201ENST00000274990 HEG1Q9ULI3 1381 aa12.38□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 48.5 ms