RNA–Protein interactions for RNA: ENST00000274938.7

SCUBE3-201, Transcript of signal peptide, CUB domain and EGF like domain containing 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SCUBE3, Length 7,356 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCUBE3-201ENST00000274938 CCDC196A0A1B0GTZ2 297 aa10.11□□□□□ -0.79
SCUBE3-201ENST00000274938 BBXQ8WY36 941 aaPredicted RBP10.11□□□□□ -0.79
SCUBE3-201ENST00000274938 SPECC1Q5M775 1068 aa10.1□□□□□ -0.79
SCUBE3-201ENST00000274938 GPRASP1Q5JY77 1395 aa10.1□□□□□ -0.79
SCUBE3-201ENST00000274938 HSPA4P34932 840 aa10.1□□□□□ -0.79
SCUBE3-201ENST00000274938 STX1AQ16623 288 aa10.1□□□□□ -0.79
SCUBE3-201ENST00000274938 PYM1Q9BRP8 204 aaKnown RBP10.1□□□□□ -0.79
SCUBE3-201ENST00000274938 U3KPZ7 1027 aaPredicted RBP10.1□□□□□ -0.79
SCUBE3-201ENST00000274938 TDO2P48775 406 aa10.1□□□□□ -0.79
SCUBE3-201ENST00000274938 SNW1Q13573 536 aaKnown RBP10.1□□□□□ -0.79
SCUBE3-201ENST00000274938 RAI14Q9P0K7 980 aa10.1□□□□□ -0.79
SCUBE3-201ENST00000274938 PTPRGP23470 1445 aa10.1□□□□□ -0.79
SCUBE3-201ENST00000274938 LMAN1P49257 510 aa10.1□□□□□ -0.79
SCUBE3-201ENST00000274938 MNAT1P51948 309 aa10.1□□□□□ -0.79
SCUBE3-201ENST00000274938 CWC27Q6UX04 472 aaKnown RBP10.1□□□□□ -0.79
SCUBE3-201ENST00000274938 DHX29Q7Z478 1369 aaKnown RBP10.1□□□□□ -0.79
SCUBE3-201ENST00000274938 TSR2Q969E8 191 aaKnown RBP10.1□□□□□ -0.79
SCUBE3-201ENST00000274938 ANKRD30BQ9BXX2 1392 aa10.1□□□□□ -0.79
SCUBE3-201ENST00000274938 MROH2BQ7Z745 1585 aa10.1□□□□□ -0.79
SCUBE3-201ENST00000274938 LARP1Q6PKG0 1096 aaKnown RBP10.1□□□□□ -0.79
SCUBE3-201ENST00000274938 NSRP1Q9H0G5 558 aaKnown RBP10.1□□□□□ -0.79
SCUBE3-201ENST00000274938 HFM1A2PYH4 1435 aa10.09□□□□□ -0.79
SCUBE3-201ENST00000274938 ANKRD50Q9ULJ7 1429 aa10.09□□□□□ -0.79
SCUBE3-201ENST00000274938 IPO4Q8TEX9 1081 aaKnown RBP10.09□□□□□ -0.79
SCUBE3-201ENST00000274938 GOPCQ9HD26 462 aa10.09□□□□□ -0.79
SCUBE3-201ENST00000274938 CKAP4Q07065 602 aaKnown RBP10.09□□□□□ -0.79
SCUBE3-201ENST00000274938 RAB34Q9BZG1 259 aa10.09□□□□□ -0.79
SCUBE3-201ENST00000274938 CEP126Q9P2H0 1117 aa10.09□□□□□ -0.79
SCUBE3-201ENST00000274938 GLRX3O76003 335 aaKnown RBP10.09□□□□□ -0.79
SCUBE3-201ENST00000274938 NUP88Q99567 741 aaPredicted RBP10.09□□□□□ -0.79
SCUBE3-201ENST00000274938 SRGAP3O43295 1099 aa10.09□□□□□ -0.79
SCUBE3-201ENST00000274938 ZNF76P36508 570 aa10.09□□□□□ -0.79
SCUBE3-201ENST00000274938 GTF2A1P52655 376 aaPredicted RBP10.09□□□□□ -0.79
SCUBE3-201ENST00000274938 CFAP57Q96MR6 1250 aa10.09□□□□□ -0.79
SCUBE3-201ENST00000274938 ZNF287Q9HBT7 754 aa10.09□□□□□ -0.79
SCUBE3-201ENST00000274938 POLA1P09884 1462 aaPredicted RBP10.09□□□□□ -0.79
SCUBE3-201ENST00000274938 FAM114A1Q8IWE2 563 aa10.09□□□□□ -0.79
SCUBE3-201ENST00000274938 USP25Q9UHP3 1055 aa10.09□□□□□ -0.79
SCUBE3-201ENST00000274938 C16orf45Q96MC5 204 aaPredicted RBP10.08□□□□□ -0.8
SCUBE3-201ENST00000274938 FSD2A1L4K1 749 aa10.08□□□□□ -0.8
SCUBE3-201ENST00000274938 TATP17735 454 aaPredicted RBP10.08□□□□□ -0.8
SCUBE3-201ENST00000274938 HSF2BPO75031 334 aa10.08□□□□□ -0.8
SCUBE3-201ENST00000274938 ATP2B2Q01814 1243 aa10.08□□□□□ -0.8
SCUBE3-201ENST00000274938 UBE4AQ14139 1066 aa10.08□□□□□ -0.8
SCUBE3-201ENST00000274938 TNIP1Q15025 636 aa10.08□□□□□ -0.8
SCUBE3-201ENST00000274938 CEP135Q66GS9 1140 aa10.08□□□□□ -0.8
SCUBE3-201ENST00000274938 TRERF1Q96PN7 1200 aa10.08□□□□□ -0.8
SCUBE3-201ENST00000274938 BCCIPQ9P287 314 aaKnown RBP eCLIP10.08□□□□□ -0.8
SCUBE3-201ENST00000274938 GOLIM4O00461 696 aa10.08□□□□□ -0.8
SCUBE3-201ENST00000274938 MAP4K4O95819 1239 aaPredicted RBP10.08□□□□□ -0.8
SCUBE3-201ENST00000274938 MX1P20591 662 aa10.08□□□□□ -0.8
SCUBE3-201ENST00000274938 TUBB4BP68371 445 aa10.08□□□□□ -0.8
SCUBE3-201ENST00000274938 IFI16Q16666 785 aaKnown RBP10.08□□□□□ -0.8
SCUBE3-201ENST00000274938 KIF1BPQ96EK5 621 aa10.08□□□□□ -0.8
SCUBE3-201ENST00000274938 HLTFQ14527 1009 aaKnown RBP eCLIP10.08□□□□□ -0.8
SCUBE3-201ENST00000274938 MAATS1Q7Z4T9 603 aa10.07□□□□□ -0.8
SCUBE3-201ENST00000274938 ZNF692Q9BU19 519 aaPredicted RBP10.07□□□□□ -0.8
SCUBE3-201ENST00000274938 SRRTQ9BXP5 876 aaKnown RBP10.07□□□□□ -0.8
SCUBE3-201ENST00000274938 SIL1Q9H173 461 aa10.07□□□□□ -0.8
SCUBE3-201ENST00000274938 TNPO1Q92973 898 aaKnown RBP10.07□□□□□ -0.8
SCUBE3-201ENST00000274938 C8orf76Q96K31 380 aa10.07□□□□□ -0.8
SCUBE3-201ENST00000274938 GTPBP4Q9BZE4 634 aaKnown RBP10.07□□□□□ -0.8
SCUBE3-201ENST00000274938 ATF3P18847 181 aa10.07□□□□□ -0.8
SCUBE3-201ENST00000274938 LIMCH1Q9UPQ0 1083 aa10.07□□□□□ -0.8
SCUBE3-201ENST00000274938 ADCY5O95622 1261 aa10.07□□□□□ -0.8
SCUBE3-201ENST00000274938 KANK3Q6NY19 840 aa10.07□□□□□ -0.8
SCUBE3-201ENST00000274938 FBF1Q8TES7 1133 aa10.07□□□□□ -0.8
SCUBE3-201ENST00000274938 PLEKHH2Q8IVE3 1493 aa10.07□□□□□ -0.8
SCUBE3-201ENST00000274938 MATR3P43243 847 aaKnown RBP eCLIP10.07□□□□□ -0.8
SCUBE3-201ENST00000274938 TMEM266Q2M3C6 531 aa10.07□□□□□ -0.8
SCUBE3-201ENST00000274938 KLHL40Q2TBA0 621 aa10.07□□□□□ -0.8
SCUBE3-201ENST00000274938 AIDAQ96BJ3 306 aa10.07□□□□□ -0.8
SCUBE3-201ENST00000274938 MPHOSPH8Q99549 860 aa10.07□□□□□ -0.8
SCUBE3-201ENST00000274938 CLCN1P35523 988 aa10.06□□□□□ -0.8
SCUBE3-201ENST00000274938 FKBP4Q02790 459 aaKnown RBP eCLIP10.06□□□□□ -0.8
SCUBE3-201ENST00000274938 TDRD12Q587J7 1177 aaKnown RBP10.06□□□□□ -0.8
SCUBE3-201ENST00000274938 TMC6Q7Z403 805 aa10.06□□□□□ -0.8
SCUBE3-201ENST00000274938 FERMT3Q86UX7 667 aa10.06□□□□□ -0.8
SCUBE3-201ENST00000274938 CADPSQ9ULU8 1353 aa10.06□□□□□ -0.8
SCUBE3-201ENST00000274938 FERP16591 822 aa10.06□□□□□ -0.8
SCUBE3-201ENST00000274938 CCDC155Q8N6L0 562 aa10.06□□□□□ -0.8
SCUBE3-201ENST00000274938 CNNM3Q8NE01 707 aa10.06□□□□□ -0.8
SCUBE3-201ENST00000274938 OPA1O60313 960 aa10.06□□□□□ -0.8
SCUBE3-201ENST00000274938 SLFN5Q08AF3 891 aa10.06□□□□□ -0.8
SCUBE3-201ENST00000274938 CETN1Q12798 172 aa10.06□□□□□ -0.8
SCUBE3-201ENST00000274938 NOL12Q9UGY1 213 aaKnown RBP eCLIP10.06□□□□□ -0.8
SCUBE3-201ENST00000274938 V9GYY5 206 aaPredicted RBP10.06□□□□□ -0.8
SCUBE3-201ENST00000274938 MPHOSPH10O00566 681 aaKnown RBP10.06□□□□□ -0.8
SCUBE3-201ENST00000274938 DAAM2Q86T65 1068 aa10.06□□□□□ -0.8
SCUBE3-201ENST00000274938 STMN4Q9H169 189 aaPredicted RBP10.06□□□□□ -0.8
SCUBE3-201ENST00000274938 SEC63Q9UGP8 760 aaKnown RBP10.06□□□□□ -0.8
SCUBE3-201ENST00000274938 FCHSD2O94868 740 aa10.05□□□□□ -0.8
SCUBE3-201ENST00000274938 PRPF40BQ6NWY9 871 aaKnown RBP10.05□□□□□ -0.8
SCUBE3-201ENST00000274938 TRMT1Q9NXH9 659 aaKnown RBP10.05□□□□□ -0.8
SCUBE3-201ENST00000274938 AKAP2Q9Y2D5 859 aa10.05□□□□□ -0.8
SCUBE3-201ENST00000274938 ALDH1L2Q3SY69 923 aa10.05□□□□□ -0.8
SCUBE3-201ENST00000274938 ZHX1Q9UKY1 873 aaPredicted RBP10.05□□□□□ -0.8
SCUBE3-201ENST00000274938 SSFA2P28290 1259 aa10.05□□□□□ -0.8
SCUBE3-201ENST00000274938 KLHL10Q6JEL2 608 aa10.05□□□□□ -0.8
SCUBE3-201ENST00000274938 CCDC97Q96F63 343 aaPredicted RBP10.05□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 17.7 ms