RNA–Protein interactions for RNA: ENST00000268896.9

PCTP-201, Transcript of phosphatidylcholine transfer protein, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PCTP, Length 2,044 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCTP-201ENST00000268896 HSPA1LP34931 641 aa20.63■□□□□ 0.89
PCTP-201ENST00000268896 C8orf37Q96NL8 207 aa20.63■□□□□ 0.89
PCTP-201ENST00000268896 BABAM1Q9NWV8 329 aa20.63■□□□□ 0.89
PCTP-201ENST00000268896 NFATC2IPQ8NCF5 419 aa20.63■□□□□ 0.89
PCTP-201ENST00000268896 SCN11AQ9UI33 1791 aa20.62■□□□□ 0.89
PCTP-201ENST00000268896 IPO8O15397 1037 aaKnown RBP20.62■□□□□ 0.89
PCTP-201ENST00000268896 CCDC9Q9Y3X0 531 aaKnown RBP20.62■□□□□ 0.89
PCTP-201ENST00000268896 KDM3BQ7LBC6 1761 aa20.62■□□□□ 0.89
PCTP-201ENST00000268896 EIF4A1P60842 406 aaKnown RBP20.61■□□□□ 0.89
PCTP-201ENST00000268896 SLC39A6Q13433 755 aa20.61■□□□□ 0.89
PCTP-201ENST00000268896 DCAF5Q96JK2 942 aa20.61■□□□□ 0.89
PCTP-201ENST00000268896 SLC52A2Q9HAB3 445 aa20.61■□□□□ 0.89
PCTP-201ENST00000268896 ADAMTS7Q9UKP4 1686 aa20.61■□□□□ 0.89
PCTP-201ENST00000268896 PLEKHG2Q9H7P9 1386 aa20.6■□□□□ 0.89
PCTP-201ENST00000268896 NRAPQ86VF7 1730 aa20.6■□□□□ 0.89
PCTP-201ENST00000268896 SIPA1L3O60292 1781 aaPredicted RBP20.6■□□□□ 0.89
PCTP-201ENST00000268896 SLC4A2P04920 1241 aa20.6■□□□□ 0.89
PCTP-201ENST00000268896 HSP90AB1P08238 724 aaKnown RBP20.6■□□□□ 0.89
PCTP-201ENST00000268896 ITPRIPQ8IWB1 547 aa20.6■□□□□ 0.89
PCTP-201ENST00000268896 EIF2S2P20042 333 aaKnown RBP20.59■□□□□ 0.89
PCTP-201ENST00000268896 BRPF1P55201 1214 aaPredicted RBP20.59■□□□□ 0.89
PCTP-201ENST00000268896 TMEM57Q8N5G2 664 aa20.59■□□□□ 0.89
PCTP-201ENST00000268896 NGLY1Q96IV0 654 aa20.59■□□□□ 0.89
PCTP-201ENST00000268896 SHANK3Q9BYB0 1731 aa20.59■□□□□ 0.89
PCTP-201ENST00000268896 CABP4P57796 275 aa20.58■□□□□ 0.89
PCTP-201ENST00000268896 MS4A1P11836 297 aa20.58■□□□□ 0.88
PCTP-201ENST00000268896 MVPQ14764 893 aaKnown RBP20.58■□□□□ 0.88
PCTP-201ENST00000268896 SLIT2O94813 1529 aa20.56■□□□□ 0.88
PCTP-201ENST00000268896 LRP6O75581 1613 aa20.56■□□□□ 0.88
PCTP-201ENST00000268896 HDGFL1Q5TGJ6 251 aa20.56■□□□□ 0.88
PCTP-201ENST00000268896 G2E3Q7L622 706 aa20.56■□□□□ 0.88
PCTP-201ENST00000268896 STK31Q9BXU1 1019 aa20.56■□□□□ 0.88
PCTP-201ENST00000268896 SPATA31A1Q5TZJ5 1347 aa20.56■□□□□ 0.88
PCTP-201ENST00000268896 PRAMEF22A3QJZ6 481 aa20.55■□□□□ 0.88
PCTP-201ENST00000268896 DISP2A7MBM2 1401 aa20.55■□□□□ 0.88
PCTP-201ENST00000268896 CCDC30Q5VVM6 783 aa20.55■□□□□ 0.88
PCTP-201ENST00000268896 ZNF790Q6PG37 636 aa20.54■□□□□ 0.88
PCTP-201ENST00000268896 ARHGAP45Q92619 1136 aa20.54■□□□□ 0.88
PCTP-201ENST00000268896 SPATA31A6Q5VVP1 1343 aa20.53■□□□□ 0.88
PCTP-201ENST00000268896 NWD2Q9ULI1 1742 aa20.53■□□□□ 0.88
PCTP-201ENST00000268896 MEX3CQ5U5Q3 659 aaKnown RBP20.53■□□□□ 0.88
PCTP-201ENST00000268896 EXOC5O00471 708 aa20.53■□□□□ 0.88
PCTP-201ENST00000268896 UNC5CLQ8IV45 518 aa20.53■□□□□ 0.88
PCTP-201ENST00000268896 API5Q9BZZ5 524 aaKnown RBP20.53■□□□□ 0.88
PCTP-201ENST00000268896 MRC1P22897 1456 aa20.52■□□□□ 0.88
PCTP-201ENST00000268896 SPATA31A5Q5VU36 1347 aa20.52■□□□□ 0.88
PCTP-201ENST00000268896 SPATA31A7Q8IWB4 1347 aa20.52■□□□□ 0.88
PCTP-201ENST00000268896 TTC5Q8N0Z6 440 aa20.52■□□□□ 0.88
PCTP-201ENST00000268896 NKX1-1Q15270 411 aaPredicted RBP20.51■□□□□ 0.87
PCTP-201ENST00000268896 WNK3Q9BYP7 1800 aa20.51■□□□□ 0.87
PCTP-201ENST00000268896 GIGYF1O75420 1035 aaPredicted RBP20.51■□□□□ 0.87
PCTP-201ENST00000268896 ANXA1P04083 346 aa20.5■□□□□ 0.87
PCTP-201ENST00000268896 CHPF2Q9P2E5 772 aa20.5■□□□□ 0.87
PCTP-201ENST00000268896 DDX19BQ9UMR2 479 aa20.5■□□□□ 0.87
PCTP-201ENST00000268896 ABCC4O15439 1325 aa20.5■□□□□ 0.87
PCTP-201ENST00000268896 SOS1Q07889 1333 aaPredicted RBP20.5■□□□□ 0.87
PCTP-201ENST00000268896 ZNF496Q96IT1 587 aaPredicted RBP20.49■□□□□ 0.87
PCTP-201ENST00000268896 ERVV-2B6SEH9 535 aa20.49■□□□□ 0.87
PCTP-201ENST00000268896 F6X3S4 739 aa20.49■□□□□ 0.87
PCTP-201ENST00000268896 PHAXQ9H814 394 aaKnown RBP20.49■□□□□ 0.87
PCTP-201ENST00000268896 THRAP3Q9Y2W1 955 aaKnown RBP20.49■□□□□ 0.87
PCTP-201ENST00000268896 TOGARAM1Q9Y4F4 1720 aa20.49■□□□□ 0.87
PCTP-201ENST00000268896 BCL9LQ86UU0 1499 aa20.49■□□□□ 0.87
PCTP-201ENST00000268896 PTPRCP08575 1304 aa20.48■□□□□ 0.87
PCTP-201ENST00000268896 RGS12O14924 1447 aa20.48■□□□□ 0.87
PCTP-201ENST00000268896 HOXB7P09629 217 aa20.48■□□□□ 0.87
PCTP-201ENST00000268896 FLIIQ13045 1269 aa20.48■□□□□ 0.87
PCTP-201ENST00000268896 USP21Q9UK80 565 aa20.48■□□□□ 0.87
PCTP-201ENST00000268896 FKBP5Q13451 457 aaPredicted RBP20.48■□□□□ 0.87
PCTP-201ENST00000268896 DDB1Q16531 1140 aa20.48■□□□□ 0.87
PCTP-201ENST00000268896 FAM98CQ17RN3 349 aaKnown RBP20.48■□□□□ 0.87
PCTP-201ENST00000268896 HEG1Q9ULI3 1381 aa20.47■□□□□ 0.87
PCTP-201ENST00000268896 SLC4A10Q6U841 1118 aa20.47■□□□□ 0.87
PCTP-201ENST00000268896 PCDHB15Q9Y5E8 787 aa20.47■□□□□ 0.87
PCTP-201ENST00000268896 A0A0G2JS52 829 aa20.46■□□□□ 0.87
PCTP-201ENST00000268896 TSHZ2Q9NRE2 1034 aa20.46■□□□□ 0.87
PCTP-201ENST00000268896 KAT6BQ8WYB5 2073 aa20.46■□□□□ 0.87
PCTP-201ENST00000268896 TNS2Q63HR2 1409 aa20.46■□□□□ 0.87
PCTP-201ENST00000268896 FNBP4Q8N3X1 1017 aaPredicted RBP20.46■□□□□ 0.87
PCTP-201ENST00000268896 TMOD3Q9NYL9 352 aa20.46■□□□□ 0.87
PCTP-201ENST00000268896 C5P01031 1676 aa20.46■□□□□ 0.87
PCTP-201ENST00000268896 IGHDP01880 384 aa20.45■□□□□ 0.86
PCTP-201ENST00000268896 MYT1Q01538 1121 aa20.45■□□□□ 0.86
PCTP-201ENST00000268896 VPS72Q15906 364 aa20.45■□□□□ 0.86
PCTP-201ENST00000268896 SYTL4Q96C24 671 aaPredicted RBP20.45■□□□□ 0.86
PCTP-201ENST00000268896 FMNL2Q96PY5 1086 aa20.45■□□□□ 0.86
PCTP-201ENST00000268896 CDCA7Q9BWT1 371 aaPredicted RBP20.45■□□□□ 0.86
PCTP-201ENST00000268896 PROSER3Q2NL68 480 aa20.44■□□□□ 0.86
PCTP-201ENST00000268896 PTCD1O75127 700 aaKnown RBP20.44■□□□□ 0.86
PCTP-201ENST00000268896 SKAP1Q86WV1 359 aa20.44■□□□□ 0.86
PCTP-201ENST00000268896 C1orf115Q9H7X2 142 aa20.44■□□□□ 0.86
PCTP-201ENST00000268896 KDM2BQ8NHM5 1336 aa20.43■□□□□ 0.86
PCTP-201ENST00000268896 BARGINQ6ZT62 677 aa20.43■□□□□ 0.86
PCTP-201ENST00000268896 PIGBQ92521 554 aa20.43■□□□□ 0.86
PCTP-201ENST00000268896 USP16Q9Y5T5 823 aa20.43■□□□□ 0.86
PCTP-201ENST00000268896 ZBTB7BO15156 539 aaPredicted RBP20.42■□□□□ 0.86
PCTP-201ENST00000268896 SNRPA1P09661 255 aaKnown RBP20.42■□□□□ 0.86
PCTP-201ENST00000268896 PIP4K2AP48426 406 aaPredicted RBP20.42■□□□□ 0.86
PCTP-201ENST00000268896 ZBTB40Q9NUA8 1239 aa20.42■□□□□ 0.86
PCTP-201ENST00000268896 AFF2P51816 1311 aa20.42■□□□□ 0.86
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms