RNA–Protein interactions for RNA: ENST00000267996.11

TPM1-201, Transcript of tropomyosin 1, humanhuman

TSL 1 (best) BASIC

Gene TPM1, Length 1,670 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-201ENST00000267996 API5Q9BZZ5 524 aaKnown RBP20.87■□□□□ 0.93
TPM1-201ENST00000267996 ABCC4O15439 1325 aa20.87■□□□□ 0.93
TPM1-201ENST00000267996 BTBD11A6QL63 1104 aa20.86■□□□□ 0.93
TPM1-201ENST00000267996 DDX19BQ9UMR2 479 aa20.86■□□□□ 0.93
TPM1-201ENST00000267996 MRC1P22897 1456 aa20.86■□□□□ 0.93
TPM1-201ENST00000267996 HSP90AB1P08238 724 aaKnown RBP20.86■□□□□ 0.93
TPM1-201ENST00000267996 HOXB7P09629 217 aa20.86■□□□□ 0.93
TPM1-201ENST00000267996 IL2RBP14784 551 aa20.86■□□□□ 0.93
TPM1-201ENST00000267996 CENPQQ7L2Z9 268 aaPredicted RBP20.85■□□□□ 0.93
TPM1-201ENST00000267996 ZCRB1Q8TBF4 217 aaKnown RBP20.85■□□□□ 0.93
TPM1-201ENST00000267996 DCAF5Q96JK2 942 aa20.85■□□□□ 0.93
TPM1-201ENST00000267996 PTPRCP08575 1304 aa20.85■□□□□ 0.93
TPM1-201ENST00000267996 HEG1Q9ULI3 1381 aa20.84■□□□□ 0.93
TPM1-201ENST00000267996 CACNA1FO60840 1977 aa20.84■□□□□ 0.93
TPM1-201ENST00000267996 RGS12O14924 1447 aa20.83■□□□□ 0.93
TPM1-201ENST00000267996 KCNQ3O43525 872 aa20.83■□□□□ 0.93
TPM1-201ENST00000267996 CCDC30Q5VVM6 783 aa20.83■□□□□ 0.93
TPM1-201ENST00000267996 SLC52A2Q9HAB3 445 aa20.83■□□□□ 0.93
TPM1-201ENST00000267996 SLC4A2P04920 1241 aa20.83■□□□□ 0.92
TPM1-201ENST00000267996 ITPRIPQ8IWB1 547 aa20.83■□□□□ 0.92
TPM1-201ENST00000267996 PCDH11XQ9BZA7 1347 aa20.82■□□□□ 0.92
TPM1-201ENST00000267996 PCDH11YQ9BZA8 1340 aa20.82■□□□□ 0.92
TPM1-201ENST00000267996 PCDHB15Q9Y5E8 787 aa20.82■□□□□ 0.92
TPM1-201ENST00000267996 SHANK3Q9BYB0 1731 aa20.81■□□□□ 0.92
TPM1-201ENST00000267996 NKX1-1Q15270 411 aaPredicted RBP20.81■□□□□ 0.92
TPM1-201ENST00000267996 CERKQ8TCT0 537 aa20.8■□□□□ 0.92
TPM1-201ENST00000267996 CHMP4AQ9BY43 222 aa20.8■□□□□ 0.92
TPM1-201ENST00000267996 ZBTB40Q9NUA8 1239 aa20.8■□□□□ 0.92
TPM1-201ENST00000267996 PLCH1Q4KWH8 1693 aa20.8■□□□□ 0.92
TPM1-201ENST00000267996 DISP2A7MBM2 1401 aa20.8■□□□□ 0.92
TPM1-201ENST00000267996 STK31Q9BXU1 1019 aa20.8■□□□□ 0.92
TPM1-201ENST00000267996 INTS3Q68E01 1043 aaKnown RBP20.79■□□□□ 0.92
TPM1-201ENST00000267996 NRAPQ86VF7 1730 aa20.78■□□□□ 0.92
TPM1-201ENST00000267996 ZBTB7BO15156 539 aaPredicted RBP20.78■□□□□ 0.92
TPM1-201ENST00000267996 IGHDP01880 384 aa20.78■□□□□ 0.92
TPM1-201ENST00000267996 G2E3Q7L622 706 aa20.78■□□□□ 0.92
TPM1-201ENST00000267996 HDGFL1Q5TGJ6 251 aa20.77■□□□□ 0.92
TPM1-201ENST00000267996 NFATC2IPQ8NCF5 419 aa20.77■□□□□ 0.92
TPM1-201ENST00000267996 CHMP4BQ9H444 224 aaKnown RBP20.77■□□□□ 0.92
TPM1-201ENST00000267996 GIGYF1O75420 1035 aaPredicted RBP20.77■□□□□ 0.91
TPM1-201ENST00000267996 ADAMTS2O95450 1211 aa20.77■□□□□ 0.91
TPM1-201ENST00000267996 ZNF790Q6PG37 636 aa20.77■□□□□ 0.91
TPM1-201ENST00000267996 JCADQ9P266 1359 aa20.76■□□□□ 0.91
TPM1-201ENST00000267996 ERVV-2B6SEH9 535 aa20.75■□□□□ 0.91
TPM1-201ENST00000267996 TSHZ2Q9NRE2 1034 aa20.75■□□□□ 0.91
TPM1-201ENST00000267996 NWD2Q9ULI1 1742 aa20.75■□□□□ 0.91
TPM1-201ENST00000267996 FLIIQ13045 1269 aa20.74■□□□□ 0.91
TPM1-201ENST00000267996 SLIT2O94813 1529 aa20.74■□□□□ 0.91
TPM1-201ENST00000267996 CABP4P57796 275 aa20.73■□□□□ 0.91
TPM1-201ENST00000267996 USP35Q9P2H5 1018 aa20.73■□□□□ 0.91
TPM1-201ENST00000267996 NUTM2BA6NNL0 878 aaPredicted RBP20.73■□□□□ 0.91
TPM1-201ENST00000267996 NUTM2EB1AL46 878 aaPredicted RBP20.73■□□□□ 0.91
TPM1-201ENST00000267996 NUTM2AQ8IVF1 878 aaPredicted RBP20.73■□□□□ 0.91
TPM1-201ENST00000267996 NECTIN2Q92692 538 aa20.73■□□□□ 0.91
TPM1-201ENST00000267996 WNK3Q9BYP7 1800 aa20.72■□□□□ 0.91
TPM1-201ENST00000267996 SLC39A6Q13433 755 aa20.72■□□□□ 0.91
TPM1-201ENST00000267996 HDAC1Q13547 482 aaPredicted RBP20.72■□□□□ 0.91
TPM1-201ENST00000267996 RWDD1Q9H446 243 aaPredicted RBP20.72■□□□□ 0.91
TPM1-201ENST00000267996 DDX54Q8TDD1 881 aaKnown RBP20.71■□□□□ 0.91
TPM1-201ENST00000267996 SPATA31A1Q5TZJ5 1347 aa20.71■□□□□ 0.91
TPM1-201ENST00000267996 EIF2S2P20042 333 aaKnown RBP20.7■□□□□ 0.91
TPM1-201ENST00000267996 THRAP3Q9Y2W1 955 aaKnown RBP20.7■□□□□ 0.91
TPM1-201ENST00000267996 CDCA7Q9BWT1 371 aaPredicted RBP20.7■□□□□ 0.9
TPM1-201ENST00000267996 CHPF2Q9P2E5 772 aa20.7■□□□□ 0.9
TPM1-201ENST00000267996 CCT4P50991 539 aaKnown RBP20.69■□□□□ 0.9
TPM1-201ENST00000267996 FKBP5Q13451 457 aaPredicted RBP20.68■□□□□ 0.9
TPM1-201ENST00000267996 ZNF496Q96IT1 587 aaPredicted RBP20.68■□□□□ 0.9
TPM1-201ENST00000267996 DBF4Q9UBU7 674 aaPredicted RBP20.68■□□□□ 0.9
TPM1-201ENST00000267996 PXDNLA1KZ92 1463 aa20.68■□□□□ 0.9
TPM1-201ENST00000267996 TOGARAM1Q9Y4F4 1720 aa20.68■□□□□ 0.9
TPM1-201ENST00000267996 F6X3S4 739 aa20.67■□□□□ 0.9
TPM1-201ENST00000267996 GLI3P10071 1580 aa20.67■□□□□ 0.9
TPM1-201ENST00000267996 N4BP2Q86UW6 1770 aaPredicted RBP20.67■□□□□ 0.9
TPM1-201ENST00000267996 PAPPAQ13219 1627 aa20.67■□□□□ 0.9
TPM1-201ENST00000267996 SPATA31A5Q5VU36 1347 aa20.67■□□□□ 0.9
TPM1-201ENST00000267996 SPATA31A7Q8IWB4 1347 aa20.67■□□□□ 0.9
TPM1-201ENST00000267996 C5P01031 1676 aa20.67■□□□□ 0.9
TPM1-201ENST00000267996 PRAMEF22A3QJZ6 481 aa20.67■□□□□ 0.9
TPM1-201ENST00000267996 TTC5Q8N0Z6 440 aa20.67■□□□□ 0.9
TPM1-201ENST00000267996 FMNL2Q96PY5 1086 aa20.67■□□□□ 0.9
TPM1-201ENST00000267996 PHAXQ9H814 394 aaKnown RBP20.67■□□□□ 0.9
TPM1-201ENST00000267996 TNS2Q63HR2 1409 aa20.66■□□□□ 0.9
TPM1-201ENST00000267996 SPATA31A6Q5VVP1 1343 aa20.66■□□□□ 0.9
TPM1-201ENST00000267996 UBR2Q8IWV8 1755 aa20.66■□□□□ 0.9
TPM1-201ENST00000267996 LRP6O75581 1613 aa20.65■□□□□ 0.9
TPM1-201ENST00000267996 SNRPA1P09661 255 aaKnown RBP20.65■□□□□ 0.9
TPM1-201ENST00000267996 EXOC5O00471 708 aa20.64■□□□□ 0.9
TPM1-201ENST00000267996 DDX21Q9NR30 783 aaKnown RBP eCLIP20.64■□□□□ 0.9
TPM1-201ENST00000267996 PDIA6Q15084 440 aa20.64■□□□□ 0.89
TPM1-201ENST00000267996 BARGINQ6ZT62 677 aa20.64■□□□□ 0.89
TPM1-201ENST00000267996 SKAP1Q86WV1 359 aa20.64■□□□□ 0.89
TPM1-201ENST00000267996 UNC5CLQ8IV45 518 aa20.64■□□□□ 0.89
TPM1-201ENST00000267996 HYPKQ9NX55 129 aa20.64■□□□□ 0.89
TPM1-201ENST00000267996 SLC4A10Q6U841 1118 aa20.63■□□□□ 0.89
TPM1-201ENST00000267996 SMC5Q8IY18 1101 aa20.63■□□□□ 0.89
TPM1-201ENST00000267996 FNBP4Q8N3X1 1017 aaPredicted RBP20.63■□□□□ 0.89
TPM1-201ENST00000267996 KCPQ6ZWJ8 1503 aa20.63■□□□□ 0.89
TPM1-201ENST00000267996 BCL9LQ86UU0 1499 aa20.62■□□□□ 0.89
TPM1-201ENST00000267996 PROSER3Q2NL68 480 aa20.62■□□□□ 0.89
TPM1-201ENST00000267996 ANXA1P04083 346 aa20.61■□□□□ 0.89
Retrieved 100 of 20,778 RNA–protein pairs in 422.8 ms