RNA–Protein interactions for RNA: ENST00000265810.8

PDLIM2-201, Transcript of PDZ and LIM domain 2, humanhuman

TSL 1 (best) BASIC

Gene PDLIM2, Length 4,592 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM2-201ENST00000265810 BICDL1Q6ZP65 573 aa17.67■□□□□ 0.42
PDLIM2-201ENST00000265810 ARHGEF25Q86VW2 580 aa17.67■□□□□ 0.42
PDLIM2-201ENST00000265810 TOMM22Q9NS69 142 aa17.67■□□□□ 0.42
PDLIM2-201ENST00000265810 PLEKHF1Q96S99 279 aa17.66■□□□□ 0.42
PDLIM2-201ENST00000265810 C22orf23Q9BZE7 217 aa17.66■□□□□ 0.42
PDLIM2-201ENST00000265810 CNNM1Q9NRU3 951 aa17.66■□□□□ 0.42
PDLIM2-201ENST00000265810 CHL1O00533 1208 aa17.66■□□□□ 0.42
PDLIM2-201ENST00000265810 ANP32EQ9BTT0 268 aa17.66■□□□□ 0.42
PDLIM2-201ENST00000265810 ADAMTS13Q76LX8 1427 aa17.66■□□□□ 0.42
PDLIM2-201ENST00000265810 IGHDP01880 384 aa17.66■□□□□ 0.42
PDLIM2-201ENST00000265810 RICTORQ6R327 1708 aa17.66■□□□□ 0.42
PDLIM2-201ENST00000265810 ATP5J2-PTCD1G3V325 749 aa17.65■□□□□ 0.42
PDLIM2-201ENST00000265810 TEX13AQ9BXU3 409 aaPredicted RBP17.65■□□□□ 0.42
PDLIM2-201ENST00000265810 PCDHB15Q9Y5E8 787 aa17.65■□□□□ 0.42
PDLIM2-201ENST00000265810 COPS6Q7L5N1 327 aa17.64■□□□□ 0.42
PDLIM2-201ENST00000265810 CNTROBQ8N137 903 aa17.64■□□□□ 0.42
PDLIM2-201ENST00000265810 PTPRMP28827 1452 aa17.64■□□□□ 0.41
PDLIM2-201ENST00000265810 A0A087WZG4 1122 aa17.64■□□□□ 0.41
PDLIM2-201ENST00000265810 SMARCA5O60264 1052 aaPredicted RBP17.64■□□□□ 0.41
PDLIM2-201ENST00000265810 MEIS3Q99687 375 aa17.64■□□□□ 0.41
PDLIM2-201ENST00000265810 ANKRD13DQ6ZTN6 518 aa17.64■□□□□ 0.41
PDLIM2-201ENST00000265810 XAGE3Q8WTP9 111 aa17.64■□□□□ 0.41
PDLIM2-201ENST00000265810 QRICH2Q9H0J4 1663 aa17.64■□□□□ 0.41
PDLIM2-201ENST00000265810 ANKARQ7Z5J8 1434 aa17.64■□□□□ 0.41
PDLIM2-201ENST00000265810 DNAJC2Q99543 621 aaKnown RBP17.64■□□□□ 0.41
PDLIM2-201ENST00000265810 FSD1Q9BTV5 496 aa17.64■□□□□ 0.41
PDLIM2-201ENST00000265810 PCDH11XQ9BZA7 1347 aa17.63■□□□□ 0.41
PDLIM2-201ENST00000265810 PCDH11YQ9BZA8 1340 aa17.63■□□□□ 0.41
PDLIM2-201ENST00000265810 MROH1Q8NDA8 1641 aa17.63■□□□□ 0.41
PDLIM2-201ENST00000265810 ISY1Q9ULR0 285 aaKnown RBP17.63■□□□□ 0.41
PDLIM2-201ENST00000265810 TULP4Q9NRJ4 1543 aa17.63■□□□□ 0.41
PDLIM2-201ENST00000265810 SPATA31D1Q6ZQQ2 1576 aa17.63■□□□□ 0.41
PDLIM2-201ENST00000265810 BACH2Q9BYV9 841 aa17.63■□□□□ 0.41
PDLIM2-201ENST00000265810 ZKSCAN1P17029 563 aaPredicted RBP17.62■□□□□ 0.41
PDLIM2-201ENST00000265810 BRINP3Q76B58 766 aa17.62■□□□□ 0.41
PDLIM2-201ENST00000265810 AACSQ86V21 672 aa17.62■□□□□ 0.41
PDLIM2-201ENST00000265810 ADGRL3Q9HAR2 1447 aa17.62■□□□□ 0.41
PDLIM2-201ENST00000265810 GPTP24298 496 aa17.62■□□□□ 0.41
PDLIM2-201ENST00000265810 KIAA0232Q92628 1395 aa17.62■□□□□ 0.41
PDLIM2-201ENST00000265810 APPP05067 770 aa17.62■□□□□ 0.41
PDLIM2-201ENST00000265810 NRXN1Q9ULB1 1477 aa17.62■□□□□ 0.41
PDLIM2-201ENST00000265810 JARID2Q92833 1246 aaPredicted RBP17.62■□□□□ 0.41
PDLIM2-201ENST00000265810 LAMC1P11047 1609 aa17.61■□□□□ 0.41
PDLIM2-201ENST00000265810 MAP4K4O95819 1239 aaPredicted RBP17.61■□□□□ 0.41
PDLIM2-201ENST00000265810 NCBP3Q53F19 620 aaKnown RBP17.61■□□□□ 0.41
PDLIM2-201ENST00000265810 IL17REQ8NFR9 667 aa17.61■□□□□ 0.41
PDLIM2-201ENST00000265810 NUTM1Q86Y26 1132 aa17.61■□□□□ 0.41
PDLIM2-201ENST00000265810 WASHC4Q2M389 1173 aa17.6■□□□□ 0.41
PDLIM2-201ENST00000265810 ZNF790Q6PG37 636 aa17.6■□□□□ 0.41
PDLIM2-201ENST00000265810 MPHOSPH8Q99549 860 aa17.6■□□□□ 0.41
PDLIM2-201ENST00000265810 PHAXQ9H814 394 aaKnown RBP17.6■□□□□ 0.41
PDLIM2-201ENST00000265810 G2E3Q7L622 706 aa17.6■□□□□ 0.41
PDLIM2-201ENST00000265810 UBE3BQ7Z3V4 1068 aa17.6■□□□□ 0.41
PDLIM2-201ENST00000265810 CEP126Q9P2H0 1117 aa17.6■□□□□ 0.41
PDLIM2-201ENST00000265810 SF3B2Q13435 895 aaKnown RBP17.59■□□□□ 0.41
PDLIM2-201ENST00000265810 KIF1BPQ96EK5 621 aa17.59■□□□□ 0.41
PDLIM2-201ENST00000265810 IGSF1Q8N6C5 1336 aa17.59■□□□□ 0.41
PDLIM2-201ENST00000265810 TRMT112Q9UI30 125 aaKnown RBP17.59■□□□□ 0.41
PDLIM2-201ENST00000265810 GOLGA6L4A6NEF3 574 aa17.58■□□□□ 0.41
PDLIM2-201ENST00000265810 KSR2Q6VAB6 950 aa17.58■□□□□ 0.41
PDLIM2-201ENST00000265810 ZNF652Q9Y2D9 606 aa17.58■□□□□ 0.4
PDLIM2-201ENST00000265810 PPP1R42Q7Z4L9 355 aa17.57■□□□□ 0.4
PDLIM2-201ENST00000265810 ZPR1O75312 459 aa17.57■□□□□ 0.4
PDLIM2-201ENST00000265810 CCDC158Q5M9N0 1113 aa17.57■□□□□ 0.4
PDLIM2-201ENST00000265810 RIMS1Q86UR5 1692 aaKnown RBP17.57■□□□□ 0.4
PDLIM2-201ENST00000265810 ATP6V1AP38606 617 aa17.57■□□□□ 0.4
PDLIM2-201ENST00000265810 HSP90AB3PQ58FF7 597 aa17.57■□□□□ 0.4
PDLIM2-201ENST00000265810 BABAM1Q9NWV8 329 aa17.57■□□□□ 0.4
PDLIM2-201ENST00000265810 SLC52A2Q9HAB3 445 aa17.57■□□□□ 0.4
PDLIM2-201ENST00000265810 GBP4Q96PP9 640 aa17.56■□□□□ 0.4
PDLIM2-201ENST00000265810 ADGRB1O14514 1584 aa17.56■□□□□ 0.4
PDLIM2-201ENST00000265810 RNF20Q5VTR2 975 aa17.56■□□□□ 0.4
PDLIM2-201ENST00000265810 KLHL34Q8N239 644 aa17.56■□□□□ 0.4
PDLIM2-201ENST00000265810 TMEM131LA2VDJ0 1609 aa17.56■□□□□ 0.4
PDLIM2-201ENST00000265810 FBXW7Q969H0 707 aa17.56■□□□□ 0.4
PDLIM2-201ENST00000265810 CWC25Q9NXE8 425 aaPredicted RBP17.55■□□□□ 0.4
PDLIM2-201ENST00000265810 PTCH1Q13635 1447 aa17.55■□□□□ 0.4
PDLIM2-201ENST00000265810 MROH2AA6NES4 1674 aa17.55■□□□□ 0.4
PDLIM2-201ENST00000265810 PTPRUQ92729 1446 aa17.55■□□□□ 0.4
PDLIM2-201ENST00000265810 GNL2Q13823 731 aaKnown RBP17.55■□□□□ 0.4
PDLIM2-201ENST00000265810 FOXD4L5Q5VV16 416 aaPredicted RBP17.55■□□□□ 0.4
PDLIM2-201ENST00000265810 FOXD4L4Q8WXT5 416 aaPredicted RBP17.55■□□□□ 0.4
PDLIM2-201ENST00000265810 RAB11FIP3O75154 756 aa17.55■□□□□ 0.4
PDLIM2-201ENST00000265810 TTC39AQ5SRH9 613 aa17.55■□□□□ 0.4
PDLIM2-201ENST00000265810 DLC1Q96QB1 1528 aa17.55■□□□□ 0.4
PDLIM2-201ENST00000265810 ZRSR1Q15695 479 aaKnown RBP17.54■□□□□ 0.4
PDLIM2-201ENST00000265810 MX1P20591 662 aa17.54■□□□□ 0.4
PDLIM2-201ENST00000265810 ERBB3P21860 1342 aa17.54■□□□□ 0.4
PDLIM2-201ENST00000265810 SPATA31A3Q5VYP0 1347 aa17.54■□□□□ 0.4
PDLIM2-201ENST00000265810 ZNF521Q96K83 1311 aa17.54■□□□□ 0.4
PDLIM2-201ENST00000265810 KCNQ3O43525 872 aa17.54■□□□□ 0.4
PDLIM2-201ENST00000265810 HDAC1Q13547 482 aaPredicted RBP17.54■□□□□ 0.4
PDLIM2-201ENST00000265810 DDX21Q9NR30 783 aaKnown RBP eCLIP17.54■□□□□ 0.4
PDLIM2-201ENST00000265810 PHKG2P15735 406 aa17.53■□□□□ 0.4
PDLIM2-201ENST00000265810 FAM98CQ17RN3 349 aaKnown RBP17.53■□□□□ 0.4
PDLIM2-201ENST00000265810 CWF19L2Q2TBE0 894 aaKnown RBP17.53■□□□□ 0.4
PDLIM2-201ENST00000265810 CDK12Q9NYV4 1490 aaPredicted RBP17.53■□□□□ 0.4
PDLIM2-201ENST00000265810 ZBTB40Q9NUA8 1239 aa17.53■□□□□ 0.4
PDLIM2-201ENST00000265810 CEP170BQ9Y4F5 1589 aaPredicted RBP17.53■□□□□ 0.4
PDLIM2-201ENST00000265810 ZNF496Q96IT1 587 aaPredicted RBP17.53■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 16.2 ms