RNA–Protein interactions for RNA: ENST00000264389.6

COPS4-201, Transcript of COP9 signalosome subunit 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COPS4, Length 1,744 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS4-201ENST00000264389 LAMB4A4D0S4 1761 aa10.62□□□□□ -0.71
COPS4-201ENST00000264389 IPO8O15397 1037 aaKnown RBP10.62□□□□□ -0.71
COPS4-201ENST00000264389 RNMTO43148 476 aaKnown RBP10.62□□□□□ -0.71
COPS4-201ENST00000264389 KRT24Q2M2I5 525 aa10.62□□□□□ -0.71
COPS4-201ENST00000264389 ATF7IPQ6VMQ6 1270 aa10.62□□□□□ -0.71
COPS4-201ENST00000264389 MPRIPQ6WCQ1 1025 aa10.62□□□□□ -0.71
COPS4-201ENST00000264389 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP10.62□□□□□ -0.71
COPS4-201ENST00000264389 NOB1Q9ULX3 412 aaKnown RBP10.62□□□□□ -0.71
COPS4-201ENST00000264389 COG6Q9Y2V7 657 aa10.62□□□□□ -0.71
COPS4-201ENST00000264389 KDM6AO15550 1401 aaPredicted RBP10.62□□□□□ -0.71
COPS4-201ENST00000264389 BRPF1P55201 1214 aaPredicted RBP10.61□□□□□ -0.71
COPS4-201ENST00000264389 LARP1Q6PKG0 1096 aaKnown RBP10.61□□□□□ -0.71
COPS4-201ENST00000264389 DZIP1LQ8IYY4 767 aaKnown RBP10.61□□□□□ -0.71
COPS4-201ENST00000264389 MRPL50Q8N5N7 158 aaKnown RBP10.61□□□□□ -0.71
COPS4-201ENST00000264389 CLUAP1Q96AJ1 413 aa10.61□□□□□ -0.71
COPS4-201ENST00000264389 CARD10Q9BWT7 1032 aa10.61□□□□□ -0.71
COPS4-201ENST00000264389 LGR6Q9HBX8 967 aa10.61□□□□□ -0.71
COPS4-201ENST00000264389 BTG4Q9NY30 223 aa10.61□□□□□ -0.71
COPS4-201ENST00000264389 TNNQ9UQP3 1299 aa10.61□□□□□ -0.71
COPS4-201ENST00000264389 PAPPAQ13219 1627 aa10.61□□□□□ -0.71
COPS4-201ENST00000264389 RLBP1P12271 317 aa10.61□□□□□ -0.71
COPS4-201ENST00000264389 TRIM27P14373 513 aa10.61□□□□□ -0.71
COPS4-201ENST00000264389 PHKG2P15735 406 aa10.61□□□□□ -0.71
COPS4-201ENST00000264389 IFNL2Q8IZJ0 200 aa10.61□□□□□ -0.71
COPS4-201ENST00000264389 SOS1Q07889 1333 aaPredicted RBP10.6□□□□□ -0.71
COPS4-201ENST00000264389 PCDH11XQ9BZA7 1347 aa10.6□□□□□ -0.71
COPS4-201ENST00000264389 PCDH11YQ9BZA8 1340 aa10.6□□□□□ -0.71
COPS4-201ENST00000264389 UBR2Q8IWV8 1755 aa10.6□□□□□ -0.71
COPS4-201ENST00000264389 ITGB4P16144 1822 aa10.6□□□□□ -0.71
COPS4-201ENST00000264389 TCERG1O14776 1098 aaKnown RBP10.6□□□□□ -0.71
COPS4-201ENST00000264389 IL2RBP14784 551 aa10.6□□□□□ -0.71
COPS4-201ENST00000264389 TNKS1BP1Q9C0C2 1729 aaKnown RBP10.59□□□□□ -0.71
COPS4-201ENST00000264389 BTBD11A6QL63 1104 aa10.59□□□□□ -0.71
COPS4-201ENST00000264389 HSP90AB1P08238 724 aaKnown RBP10.59□□□□□ -0.71
COPS4-201ENST00000264389 C1QBPQ07021 282 aaKnown RBP10.59□□□□□ -0.71
COPS4-201ENST00000264389 MVPQ14764 893 aaKnown RBP10.59□□□□□ -0.71
COPS4-201ENST00000264389 ITPRIPQ8IWB1 547 aa10.58□□□□□ -0.72
COPS4-201ENST00000264389 CERKQ8TCT0 537 aa10.58□□□□□ -0.72
COPS4-201ENST00000264389 ARHGAP45Q92619 1136 aa10.58□□□□□ -0.72
COPS4-201ENST00000264389 JCADQ9P266 1359 aa10.58□□□□□ -0.72
COPS4-201ENST00000264389 DOT1LQ8TEK3 1739 aa10.58□□□□□ -0.72
COPS4-201ENST00000264389 ADAMTS2O95450 1211 aa10.58□□□□□ -0.72
COPS4-201ENST00000264389 AAMPQ13685 434 aa10.58□□□□□ -0.72
COPS4-201ENST00000264389 ZNF219Q9P2Y4 722 aaPredicted RBP10.58□□□□□ -0.72
COPS4-201ENST00000264389 DISP2A7MBM2 1401 aa10.57□□□□□ -0.72
COPS4-201ENST00000264389 LRP6O75581 1613 aa10.57□□□□□ -0.72
COPS4-201ENST00000264389 NUTM2BA6NNL0 878 aaPredicted RBP10.57□□□□□ -0.72
COPS4-201ENST00000264389 NUTM2EB1AL46 878 aaPredicted RBP10.57□□□□□ -0.72
COPS4-201ENST00000264389 CYP27B1O15528 508 aa10.57□□□□□ -0.72
COPS4-201ENST00000264389 NUTM2AQ8IVF1 878 aaPredicted RBP10.57□□□□□ -0.72
COPS4-201ENST00000264389 TMEM57Q8N5G2 664 aa10.57□□□□□ -0.72
COPS4-201ENST00000264389 ZCRB1Q8TBF4 217 aaKnown RBP10.57□□□□□ -0.72
COPS4-201ENST00000264389 DCAF5Q96JK2 942 aa10.57□□□□□ -0.72
COPS4-201ENST00000264389 STK31Q9BXU1 1019 aa10.57□□□□□ -0.72
COPS4-201ENST00000264389 API5Q9BZZ5 524 aaKnown RBP10.57□□□□□ -0.72
COPS4-201ENST00000264389 USP35Q9P2H5 1018 aa10.57□□□□□ -0.72
COPS4-201ENST00000264389 DDX19BQ9UMR2 479 aa10.57□□□□□ -0.72
COPS4-201ENST00000264389 ABCC4O15439 1325 aa10.57□□□□□ -0.72
COPS4-201ENST00000264389 EIF4A1P60842 406 aaKnown RBP10.56□□□□□ -0.72
COPS4-201ENST00000264389 CCDC30Q5VVM6 783 aa10.56□□□□□ -0.72
COPS4-201ENST00000264389 SLC52A2Q9HAB3 445 aa10.56□□□□□ -0.72
COPS4-201ENST00000264389 PTPRCP08575 1304 aa10.56□□□□□ -0.72
COPS4-201ENST00000264389 RGS12O14924 1447 aa10.56□□□□□ -0.72
COPS4-201ENST00000264389 SLIT2O94813 1529 aa10.56□□□□□ -0.72
COPS4-201ENST00000264389 GLI3P10071 1580 aa10.56□□□□□ -0.72
COPS4-201ENST00000264389 CAPN15O75808 1086 aa10.55□□□□□ -0.72
COPS4-201ENST00000264389 HOXB7P09629 217 aa10.55□□□□□ -0.72
COPS4-201ENST00000264389 TNS2Q63HR2 1409 aa10.55□□□□□ -0.72
COPS4-201ENST00000264389 KAT6BQ8WYB5 2073 aa10.55□□□□□ -0.72
COPS4-201ENST00000264389 HDGFL1Q5TGJ6 251 aa10.55□□□□□ -0.72
COPS4-201ENST00000264389 CENPQQ7L2Z9 268 aaPredicted RBP10.55□□□□□ -0.72
COPS4-201ENST00000264389 PXDNLA1KZ92 1463 aa10.54□□□□□ -0.72
COPS4-201ENST00000264389 KCNQ3O43525 872 aa10.54□□□□□ -0.72
COPS4-201ENST00000264389 CHMP4AQ9BY43 222 aa10.54□□□□□ -0.72
COPS4-201ENST00000264389 KDM2BQ8NHM5 1336 aa10.53□□□□□ -0.72
COPS4-201ENST00000264389 CABP4P57796 275 aa10.53□□□□□ -0.72
COPS4-201ENST00000264389 NECTIN2Q92692 538 aa10.53□□□□□ -0.72
COPS4-201ENST00000264389 CHMP4BQ9H444 224 aaKnown RBP10.53□□□□□ -0.72
COPS4-201ENST00000264389 TTC5Q8N0Z6 440 aa10.53□□□□□ -0.72
COPS4-201ENST00000264389 NFATC2IPQ8NCF5 419 aa10.53□□□□□ -0.72
COPS4-201ENST00000264389 DDX54Q8TDD1 881 aaKnown RBP10.53□□□□□ -0.72
COPS4-201ENST00000264389 HEG1Q9ULI3 1381 aa10.52□□□□□ -0.73
COPS4-201ENST00000264389 SPATA31A6Q5VVP1 1343 aa10.52□□□□□ -0.73
COPS4-201ENST00000264389 AFDNP55196 1824 aaKnown RBP10.52□□□□□ -0.73
COPS4-201ENST00000264389 EIF2S2P20042 333 aaKnown RBP10.52□□□□□ -0.73
COPS4-201ENST00000264389 NKX1-1Q15270 411 aaPredicted RBP10.52□□□□□ -0.73
COPS4-201ENST00000264389 ZNF790Q6PG37 636 aa10.52□□□□□ -0.73
COPS4-201ENST00000264389 KCPQ6ZWJ8 1503 aa10.52□□□□□ -0.73
COPS4-201ENST00000264389 ARFGEF2Q9Y6D5 1785 aa10.51□□□□□ -0.73
COPS4-201ENST00000264389 SPATA31A1Q5TZJ5 1347 aa10.51□□□□□ -0.73
COPS4-201ENST00000264389 FLIIQ13045 1269 aa10.51□□□□□ -0.73
COPS4-201ENST00000264389 SLC39A6Q13433 755 aa10.51□□□□□ -0.73
COPS4-201ENST00000264389 G2E3Q7L622 706 aa10.51□□□□□ -0.73
COPS4-201ENST00000264389 THRAP3Q9Y2W1 955 aaKnown RBP10.51□□□□□ -0.73
COPS4-201ENST00000264389 ERVV-2B6SEH9 535 aa10.5□□□□□ -0.73
COPS4-201ENST00000264389 GIGYF1O75420 1035 aaPredicted RBP10.5□□□□□ -0.73
COPS4-201ENST00000264389 FKBP5Q13451 457 aaPredicted RBP10.5□□□□□ -0.73
COPS4-201ENST00000264389 CDCA7Q9BWT1 371 aaPredicted RBP10.5□□□□□ -0.73
COPS4-201ENST00000264389 CHPF2Q9P2E5 772 aa10.5□□□□□ -0.73
COPS4-201ENST00000264389 INTS3Q68E01 1043 aaKnown RBP10.5□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms